Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101954604
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Entry
101954604 CDS
T10664
Symbol
Blm
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03440
Homologous recombination
iti03460
Fanconi anemia pathway
Brite
Enzymes [BR:
iti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101954604 (Blm)
DNA replication proteins [BR:
iti03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101954604 (Blm)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
101954604 (Blm)
Bloom's syndrome complex (BTR)
101954604 (Blm)
FA (Fanconi anemia) pathway
101954604 (Blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101954604
NCBI-ProteinID:
XP_005320222
UniProt:
I3M5A7
LinkDB
All DBs
Position
Unknown
AA seq
1414 aa
AA seq
DB search
MAAVPLNNLQEQLERHSARKLNSKLSLSKPKSSGFTFKKKLSSDNDASVASVTSVSVAKT
PVLSDKDVNVSEAFSFNESLPHNPNQQTTINDFFKNVPAGQQTKATSSKSLLPNMLQIPQ
EVLCTTQNTPAIKTPCNAVFKKLEFSSSPDSFSVMNDWDDMDDFDTSKTFSTPPENHFVR
VSTAQKSKKAKRNFIKPQPHKTNTVKTDLTPSSSENQQIDSAKDQKDDSEWLSSGVICID
DDPVSETLINDNTQESYSLKTHLGDERGNGEKKKNVEEVELLSTEKLPHIDFDDDDYDID
FVPPSPEEEIISGASSSLKSFSMLKDLDASDREKDVLSASKDVLSKPEKMTTQEPNPETN
EDFDARQINLKQQLIHVMDHICKLVDMIPVDDLKALNCGNELLQQRNIRRKLLAEADFNG
NDVSLFGSVWRHRPVSLDNPVESDFCPGGNSVKELNFPHLPSNSLSTGKCLLTTTPEKTE
SSDTLKNFFERPLFTSHLQKSFVSGNWAETPRIEKRNERNVLTSTAIKNQNKNIASKNYL
EGEIQASYDIDNFDIDDFDDDEDWENIMHNLTASKSSTAAYHPIKEGRPIKSVSEKISSA
KTNCLSVSSTAQTKSFSESIQNHTDNLAQNLASTNLRHERFQGLSFSHTKEMMKIFHKKF
GLHNFRTNQLEAINATLLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIIDQ
VQKLTSLDIPATYLTGDKTDSEATSIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENL
YERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILT
QLKIVKPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDT
MADTLQKNGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIH
ASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNL
YSMVHYCENITECRRIQLLAYFGENGFNPDFCKKYPDVSCDNCCKTKDYKTRDVTDDVKN
IVSFVQEYSSSQGTRNIKHVGPSGRFTMNMLVDIFLGSKSAKIQSGIFGKGSAYSRHNAE
RLFKKLILEKILDEDLYINANDQPIAYIMLGTKAQSVLNGHLKVDFIEMENFSNLKKQKA
LVAKVSEREEMVKKCLGELTEVCKSLGKVFGVHYFNIFNTATLKKLAESLSSDPEVLLQI
DGVTEDKLEKYGAEVIPILQKYSEWTLPAKDSSPGISLPGNRGPRKNDPEELDEEEPVSS
HYFTNKTRNERKRKKMPISQKSKRRKSSYGGFKPRGGTTTCRKISSKSKSSNIMGSSSTL
HGSQATSGARRKLGIMAPPKPINRPFLRPSYAFS
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtccctctaaataatctacaggagcaactagagcgtcactcagctagaaaa
cttaatagtaaattaagtctttcaaaacctaagtcttcgggttttacttttaagaagaaa
ttgtcttcagataatgatgcatctgtagcttctgtaactagcgtgtccgtagcaaaaaca
cctgttttaagtgataaagatgtgaatgtgtcagaggccttttccttcaatgagtctctg
ccccacaacccaaatcagcagaccacgatcaatgacttctttaaaaatgttccagcagga
cagcaaaccaaggctaccagttcaaaatcattattgcctaatatgttgcagattccacag
gaagttttatgtactacccaaaacacaccagcaataaagaccccctgcaatgctgttttc
aagaaattagaatttagttcttcaccagattctttcagcgttatgaatgattgggatgat
atggatgactttgatacttcaaaaacattttctacaccacccgaaaatcactttgttaga
gtaagcactgctcagaaatcaaaaaaagctaagagaaactttataaaaccacagcctcat
aaaacaaatacagtaaaaactgatttgactccctcatcctctgaaaaccagcaaattgat
tcggctaaggaccagaaggatgactcggaatggttaagtagtggtgtgatctgcatcgat
gatgaccctgtttctgaaacgcttataaatgacaatactcaggaaagttactctttgaaa
actcatttgggagatgaaagaggtaacggtgaaaagaagaaaaatgtagaagaagttgaa
ttactttcaactgagaagcttccacatattgattttgatgatgatgactatgacatagat
tttgttccaccttctccagaagaagaaattatttctggtgcttcttcctctttgaaaagc
tttagtatgttaaaggatcttgatgcctctgacagagagaaggatgttctcagcgcatca
aaagatgttttatcgaaaccagagaagatgactactcaagagcccaatccagaaactaat
gaagactttgatgctagacagataaatttaaagcagcagcttattcatgtgatggaccac
atctgcaaattagttgatatgattcctgttgatgatctgaaagctttgaattgtgggaat
gagctgcttcaacagcggaatataagaaggaaactcctagctgaagcagattttaatgga
aatgatgtcagtctttttggttcagtgtggagacacaggcctgtttcacttgataaccca
gtggagagtgatttctgcccaggggggaattctgttaaggagttaaattttccacacctt
ccctcaaattctctttccactgggaaatgtttactgaccactaccccagagaagacagaa
tcctcagacaccttgaagaatttctttgaaagaccgttattcacttcccatttacagaag
tcctttgtaagtggcaactgggctgaaacaccaaggatagaaaaaagaaatgaaagaaat
gttcttacaagcacggctataaaaaatcagaataaaaacattgcttcaaaaaattactta
gaaggagaaatccaggcttcctatgatattgataattttgacatagatgactttgatgat
gatgaggactgggaaaatataatgcataatttaacagccagcaaatcctccacagctgcc
tatcaccctatcaaggaaggtagaccaattaaatcagtatcagagaagatttcttcagcc
aagacaaactgtctttcagtgtcatctactgctcaaactaaaagcttttcagaatcaatt
cagaatcacactgacaacttggcgcagaatttagcatctacaaatctgagacacgagcgt
ttccaaggtctcagtttttctcatacaaaagaaatgatgaagatttttcataaaaaattt
ggcctgcataattttagaactaatcagctagaggcgatcaatgctacactgcttggtgaa
gactgctttatcctaatgcccactggaggtggtaaaagtttgtgttaccagctgcctgcc
tgtgtttctcctggggtcactattgtcatttctcccttgagatcactaataatagatcaa
gtccaaaagctgacttccttggatattccagctacatatctgacaggtgataagactgac
tcagaagctacaagtatttatctccagttatcaaaaaaagacccaattataaaacttcta
tatgttactccagagaaggtctgtgccagtaaccggctgatttccactctggagaatctg
tatgagaggaagctcttggcacgttttgttattgatgaagcacattgtgtgagtcagtgg
ggacatgattttcgtcaagattacaaaagaatgaatatgcttcgtcagaagtttccttct
gttccagtaatggctcttactgccacagcgaatcccagagtacagaaagatatcctcact
cagctgaagattgtgaagcctcaggtgttcagcatgagctttaacagacataatctgaaa
tactatgtattaccaaaaaaacctaaaaaggtagcatttgattgcttagaatggatccga
aagcatcacccatatgactcagggataatctactgcctctccaggcgggaatgtgacaca
atggctgacactttacagaagaatggtcttgctgctcttgcttatcatgctggcctcagt
gattctgccagagatgaagtgcaacacaagtggattaatcaggatggctgccaggttatc
tgtgcaacaattgcctttggaatggggattgacaaacctgatgtgcgatttgtgattcat
gcatctcttcctaaatctgtggaaggttactaccaggaatccggcagagctggacgagat
ggagaaatatctcactgcctgcttttctatacctatcatgatgtgaccagactgaagagg
cttataatgatggaaaaagatggaaaccatcatacaagagagactcatttcaataatttg
tatagcatggtacattactgtgaaaatataacagaatgcaggagaatacagcttttagct
tacttcggagaaaatggatttaaccctgatttttgtaagaaatacccggatgtttcttgt
gataattgctgtaaaacaaaggattataaaacaagagatgtgactgatgacgtgaaaaat
attgtaagttttgttcaagaatatagttcatcacaaggaacaagaaatataaaacatgta
ggtccttctggaagatttactatgaacatgctggttgatattttcctagggagtaagagt
gcaaaaattcagtcaggtatatttggaaagggatctgcttattcacgtcacaatgctgaa
agactttttaaaaagctaatacttgagaagattttggatgaagacttatatatcaatgcc
aatgaccaaccaattgcctatataatgctgggaacaaaagcccagagtgtactaaatggg
catttaaaggtagattttattgaaatggaaaatttcagcaacttgaaaaaacaaaaagct
ttagtagcaaaagtatctgagagggaagagatggttaagaaatgtcttggagaacttaca
gaagtctgcaaatccctggggaaagtttttggtgtccattacttcaatatttttaatact
gctactctcaagaagcttgcagaatctttatcttctgatcctgaggttttacttcaaatt
gatggtgttactgaagacaagctggaaaaatatggtgcagaagtgattccaatattacag
aaatactctgagtggacattgccagccaaggacagttctccagggataagccttccaggc
aacagaggccccagaaagaatgatcccgaggaactcgatgaggaagaacctgtgtcttct
cactactttacaaataaaaccagaaatgaaagaaagaggaagaagatgccaatctcccaa
aagtctaagaggagaaaaagtagttacggtggtttcaagccaaggggggggactaccacg
tgcagaaagatatcttctaaaagtaaatcctccaacataatgggatccagttcaaccttg
catggttctcaggcaacatcaggggccagaagaaaattgggaattatggcaccaccaaag
cctataaatagaccatttcttaggccttcatatgcattctcataa
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integrated database retrieval system
