Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101954709
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Entry
101954709 CDS
T10664
Symbol
Shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101954709 (Shank1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
101954709
NCBI-ProteinID:
XP_040134936
LinkDB
All DBs
Position
Unknown
AA seq
1526 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGQGPRGTRGQGSGTPGSLASARGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFSAPGASSSGAPGPPSGPQSQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
AISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFATETAAPKSSFDPHHRSQPSYERPSFLPPGPGLMLR
QKSIGAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSTSGRLTP
SPRGGPFNPPPAVAPAPPTLDSTASSLTSYDSEVATLTQGAPSAPGDPPPPGPPAPAAPA
PPVPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGGGGG
AGVSSGPELLDTYVAYLDGQAFGGSGTPGPPYPPQLMTPSKLRSRALGASGGLRPGPSGG
LRDPVTPTSPTVSVTGAGTDGLLALSACSGPSTASVAGGSVAVEPEVPPVPLPTASSLPR
KLLPWEEGPGPPPPPLPGPLTQPQASALATVKASIISELSSKLQQFGGSSAAGGALPWAR
GGSGGSGDSHHGGPSYVPERTSSLQRQRLSDDSQSSLLSKPVSSLFQNWPKPPLPPLPTG
TGVPPSAAAAPGATSPSASSSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPTSEHKVSPAP
RPSSLPILPSGPLYPGLFDIRGSPTGGAGGSADPFAPVFVPPHPGMSGGLGGALSGASRS
LSPTRLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRARFLDHEIDGSHLPALTKE
DYVDLGVTRVGHRMNIDRALKFFLER
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccctgccacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggccagggcaaggccctcgggggacc
cggggccagggcagtgggacacctggtagcctggcctctgcccgaggcctccagggtcgc
tccatgtctgtcccagacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgcctgcgtttcaacccggatgccaccatctggacggccaag
cagcaggtgctctgtgccctcagtgagagcttgcaggatgtgctcaactacggcctgttc
cagccggccacctcaggccgggatgccaatttcctggaggaggagaggctgctgcgggag
tacccccagtcctttgagaagggggtaccctacctggagttccgatacaagacccgcgtt
tacaaacagaccaacctggatgagaagcagctggccaagttgcacacaaagacggggttg
aagaagttcctggagtacgtgcagcttgggacgtcagacaaggtggcgcgcctgctggac
aaggggctggaccccaattaccatgactcagattcgggagagacccccttgaccctggcg
gcccagactgaaggctcggtagaggtgattcgaactctgtgcctgggtggggcccacatt
gacttccgggcccgggatggcatgacagcactgcacaaggccgcgtgtgcccggcattgc
ctggctctcacggcactcctggacctggggggctcccccaactacaaggaccgccgtggg
ctgacccctctgttccatacggccatggtggggggcgacccccgctgctgtgaactgctc
ctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggaaatccaccag
gcctgccagcggggccactctcagcacctggaacacctgctcttctacggagctgagcct
ggagcccagaacgcctcggggaacacggccctgcacatctgtgctctctacaacaaggag
acctgtgcaaggatcctcctctatcgaggcgccaataaggatgtgaaaaataacaatgga
cagacacccttccaggtggccgtcattgctggcaattttgagctgggggagttgatccgc
aaccatcgggaacaggacgtggtgcccttccaggagtcccccaagtatgcagcacggaga
cggggacccccaggtgcagggctgacggtgccccccgcgctgctgcgggccaacagcgat
accagcatggcactccctgactggatggtattctccgccccgggggcctcgtcctctggg
gcccctggcccgccctcgggaccccagagccagtctcagccctcggcccccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggcgcccgggcccgctcccca
tcccgagggaggcaccccgaggaggccaagaggcagccccgaggacgacccagctccagc
gggacgccccgggaagggccagccgggggcacagggggctcagggggccctgggggctcc
ctgggcagccgcgggaggcgcaggaagctctactcagcggtacctggacgctccttcatg
gctgtcaagtcgtaccaggcccaagctgagggggaaatctccctgagcaagggcgagaag
atcaaagtgctcagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgtgtt
ggctggttcccttctgactgcttggaagaggtggcaaaccgttcccaggagggaaagcaa
gaaagccgcagtgacaaagcaaagagactcttccggcattatactgtgggctcctacgac
agctttgatgccccaagcttgatggatgggattggcccagggagcgattacatcattaag
gagaagacagttttactgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctgcag
tacctggagtcagtggacgagggcggcgtggcatggagggctggacttcgaatgggagac
ttcctcatcgaggtgaatgggcagaacgtggtgaaggtcggccaccgacaggtggtaaac
atgatccgccaagggggcaacacactgatggtcaaggtggtgatggtcaccaggcacccg
gacatggatgaagctgtccataagaaagcaccccagcaggctaagcggctcccgccccca
gccatctcccttcgttccaagtctatgacctcagagctggaggaaatggtctccccttgg
aagaagaagagtgagtacgagcagcagcctgcgccagtgcccagcatggagaaaaagcgg
accgtgtatcagatggctctcaacaaactggacgaaatcttggcggcagctcaacagacc
atcagtgcaagcgagagtcctgggcctggcggcctggcgtccctgggcaagcaccggccc
aaaggcttctttgccaccgagactgccgccccaaagtcgagctttgatccccaccaccgc
tcccagccaagttatgagcgtccttctttcctgcctccgggacctgggcttatgctccgg
caaaaatccatcggggctgcagaggatgatagaccctacctagcacccccggccatgaag
tttagccgcagcctgtctgtgcctggttcggaggacatccccccaccgcccacgacgtcc
ccaccagagcctccctacagcacacctccggccccctccacctccggccgccttaccccc
tccccccggggtggccccttcaacccacccccagcggtggcccccgcccctcccaccctg
gactccaccgcatcgagcctgacgtcctacgacagtgaggtggccacactgacccagggg
gctccttcagctcctggagacccccctccaccaggccctccggccccagcagcaccggct
ccccccgtccctcagccgggtccagaccctccaccaggcacggattctggtattgaggag
gtggacagtcggagcagcagtgaccaccccctggagaccatcagtagcgcatccacgctg
agcagcctgtctgctgaaggtggtgggagcgcagggggtggtggaggtggcgggggtggg
gctggtgtgtccagtggccccgagcttctggacacctatgtggcctacctggacggccag
gcctttggggggagcgggactcctggcccaccgtaccccccacagctcatgactccctct
aagctccggagccgggcactgggggccagtggagggttgcggcctggccccagtggggga
ctgagagaccccgtcacccctaccagccccaccgtctcggtgacaggggctggaactgat
gggctgctggccctgagtgcttgctcaggaccctcgacagcaagtgtagctgggggttca
gtggcagtagagccagaagtcccaccggtgcccttgccaacggcctcctccctgcctcgg
aagctgctgccctgggaggagggcccgggcccaccaccgccacccctgcctgggcctctg
acccagcctcaggcctcagccttggccacagtaaaagccagcatcatcagtgaactcagc
tccaagctccaacagtttgggggctcctcggcagctggaggggctctgccttgggcccgg
ggaggcagcgggggcagcggggacagtcaccacgggggacccagctacgtccccgagagg
acctcctccctacagcggcagaggctctccgacgactcccagtcctccctcctctccaaa
ccagtcagcagcctgtttcagaactggcccaaaccacctctgccaccactccccactgga
accggcgtgcccccttcagcagctgcagccccaggggccacctcaccctcggcctcctcc
tcctccacgtccacccgccacctccagggcgtggagttcgagatgcggcccccgctgctc
cggcgggcccccagcccctcgctgctgcccacctcggagcacaaggtcagccctgcgccc
aggccctcgtccttgcccatcctgccttctggacccctctatccgggcctctttgacatc
cgtggctcccccaccggaggggcaggaggctccgctgacccgtttgcccctgtcttcgtg
ccgccacacccggggatgtccgggggccttggaggagctctgtcgggggcctcgcgctcc
ctctcacccacccgcctgctttcgctgcccccggacaagccgtttggcgctaaacctcta
gggttctggaccaagttcgatgtggccgattggctcgagtggctgggcttggccgagcac
cgtgcccggttcctggaccacgagatcgatggctcccacctgcccgccttgaccaaggag
gactatgtggatctgggtgtgaccagggtgggccaccgcatgaacattgaccgggctctc
aaattcttcctggagaggtga
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