Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101954727
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Entry
101954727 CDS
T10664
Symbol
Itga6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151
PI3K-Akt signaling pathway
iti04382
Cornified envelope formation
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti04514
Cell adhesion molecules
iti04640
Hematopoietic cell lineage
iti04810
Regulation of actin cytoskeleton
iti04820
Cytoskeleton in muscle cells
iti05145
Toxoplasmosis
iti05165
Human papillomavirus infection
iti05200
Pathways in cancer
iti05222
Small cell lung cancer
iti05410
Hypertrophic cardiomyopathy
iti05412
Arrhythmogenic right ventricular cardiomyopathy
iti05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101954727 (Itga6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101954727 (Itga6)
04514 Cell adhesion molecules
101954727 (Itga6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101954727 (Itga6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101954727 (Itga6)
04810 Regulation of actin cytoskeleton
101954727 (Itga6)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
101954727 (Itga6)
09158 Development and regeneration
04382 Cornified envelope formation
101954727 (Itga6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101954727 (Itga6)
09162 Cancer: specific types
05222 Small cell lung cancer
101954727 (Itga6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101954727 (Itga6)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
101954727 (Itga6)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101954727 (Itga6)
05412 Arrhythmogenic right ventricular cardiomyopathy
101954727 (Itga6)
05414 Dilated cardiomyopathy
101954727 (Itga6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iti04147
]
101954727 (Itga6)
04515 Cell adhesion molecules [BR:
iti04515
]
101954727 (Itga6)
04090 CD molecules [BR:
iti04090
]
101954727 (Itga6)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101954727 (Itga6)
Exosomal proteins of breast milk
101954727 (Itga6)
Cell adhesion molecules [BR:
iti04515
]
Integrins
Integrin alpha subunits
101954727 (Itga6)
CD molecules [BR:
iti04090
]
Proteins
101954727 (Itga6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
LRR19-TM
DUF4381
Motif
Other DBs
NCBI-GeneID:
101954727
NCBI-ProteinID:
XP_005324655
UniProt:
I3M7X9
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MAAAGQLCLLYLSAGLLPRLGSAFNLDTREDNVIRKSGDRGSLFGFSLAMHWQLQPEDKR
LLLVGAPRAEALPLQRANRTGGLYSCDITSRGPCTRIEFDNDADPTSESKEDQWMGVTVQ
SQGPGGKVVTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLKIEDDMDGGDWSFCDGRLR
GHEKFGSCQQGVAATFTKDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVG
GETDHDESLVPVPANSYLGFSLDSGKGIVSKDEITFVSGAPRANHSGAVVLLKRDMKSAH
LLPEHIFDGEGLASSFGYDVAVVDLNKDGWQDIVIGAPQYFDRDGEVGGAVYVYINKQGR
WNNVKPIRLNGTKDSMFGIAVKNIGDINQDGYPDIAVGAPYDDLGKVFIYHGSANGINTK
PTQVLEGTTPSFGYSIAGNMDLDRNSYPDVAVGSLSDSVAIFRSRPVINIAKTITVTPSR
IDLRQKTACGAPSGICLKVKACFEYTAKPAGYNPSISIVGTLEAEKERRKSGLSSRVQFR
NQATEPKYTQELTLNRQKQRVCMEETLWLQENIRDKLRPIPITASVEIQEPSSRRRVNSL
PEVLPILNSNEPKMAHTDVHFLKEGCGDDNVCNSNLKLEYKFCTREGNQDKFSYLPIQKG
TPELVLKDQKDIALEITVTNSPSNPRDPTKDGDDAHEAKLIATFPDTLTYSAYRELRAFP
EKQLSCVANQNGSQADCELGNPFKRNSSVTFYLILSTTEVTFDTTDLDINLQLETTSNQD
NLASITAKAKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEYEFRVINLG
KPLKNLGTATLNIQWPKEISNGKWLLYLVKVESKGLEKIMCEPKSEINLLNLKESHNSRK
KRSIAEKQIDDSRKFSLFAERKYQTLNCSVNVRCVNIRCPLRGLDSKASLVLRSRLWNST
FLEEYSKLNYLDILVRASIDVTDAAENIKLPNAGTQVRVTVFPSKTAAQYSGVPWWIILV
AILAGILMLALLVFLLWKCGFFKRSRYDDSVPRYHAVRIRKEEREIKDEKYNDNLEKKQW
VTKWNENESYS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgggcagctgtgcctgctctacctgtcggcggggctcctgccccggctt
ggctcagccttcaacttggacacccgcgaggacaatgtgatccggaaatctggggatcgc
gggagcctcttcggcttctcgttggccatgcactggcagctacagccagaggacaagcgg
ctgttgctggtgggagcacctcgggcagaagcccttccgctgcagagggccaacaggacc
ggaggcctgtacagctgtgacatcacctcccgaggaccttgcacgcggattgaatttgat
aatgatgctgaccctacctcagaaagcaaggaagatcaatggatgggggtcactgtccag
agtcaaggtccagggggcaaagtggtgacatgtgctcatcgatatgaaaaaaggcaacat
gttaacacaaagcaggagtctcgagacatctttgggaggtgttatgtcctgagtcagaat
cttaagattgaagatgatatggatggaggagactggagtttttgtgatggccgattaaga
ggtcatgaaaagtttggttcttgccagcaaggtgtagcagctacttttactaaagacttt
cattacattgtgtttggagccccgggtacttataactggaaagggattgttcgagtagag
caaaagaataacactttttttgacatgaacatctttgaagatgggccttatgaagttggt
ggagagactgaccatgatgaaagtctcgttcctgttcctgctaacagttatttaggcttt
tctttggactcagggaaaggtattgtttctaaagatgagatcacttttgtgtctggtgca
ccaagagccaatcacagtggagctgtggttttgctaaaaagagacatgaagtctgcacat
cttctccctgagcacatatttgatggagaaggtctggcctcttcatttggctatgatgtg
gcagtggtggacctcaacaaagacgggtggcaagatatagtaattggagccccacagtat
tttgacagagatggagaagttggaggtgcagtgtatgtctacattaacaagcaaggcaga
tggaataatgtcaagccaattcgtcttaatggaaccaaagattctatgtttggcattgca
gtaaaaaatattggagatattaatcaagatggctatccagatattgcagttggagctccc
tatgatgatttggggaaggtttttatctatcatggatccgcaaatggaataaataccaaa
ccaacacaggttcttgagggtacaacaccttcttttggatattcaattgctggaaatatg
gatcttgatagaaattcctatcctgatgttgctgttggttccctctcagattcagtagct
attttcaggtcccggcctgtgattaacattgcgaaaactatcacagtaactcctagcaga
attgacctccgccaaaaaacagcgtgcggggcgccaagtggaatatgcctcaaggttaaa
gcctgttttgaatatactgccaaacctgctggttataatccttcaatatcaattgtgggc
accctggaagctgaaaaagaaagaaggaaatctgggctgtcatccagagttcagtttcga
aaccaagctactgagcccaagtacactcaagaactgactttgaacaggcagaagcagcgg
gtttgcatggaggaaaccctctggctgcaggaaaacatcagagacaaactgcgcccgatt
cccataactgcttccgtggagatccaggagcccagctctcgcaggcgagtgaattcacta
ccagaagttcttccaatcctgaattcaaacgaacccaagatggctcacacagatgtgcac
ttcttaaaagagggatgtggagacgacaatgtatgtaacagcaaccttaaactagaatat
aaattttgtacccgagaaggaaatcaagacaaattttcttaccttccaattcaaaaaggc
acaccagagctagttttaaaagatcagaaagatattgctttggaaataacagtgacaaat
agcccttccaacccaagagatcccacaaaagatggtgatgatgcccacgaagccaaactc
attgcaacgtttccggacactttgacctattctgcttatagagagctgagggctttccct
gagaaacagttgagttgtgttgccaaccagaatggttcccaagctgactgtgagctcgga
aatccttttaaaagaaattccagtgttactttttacttgattttaagtacaactgaggtc
acctttgacaccacagatctggacattaacctgcagttggagacaacgagcaatcaagat
aatttggcttcaattacagctaaagcaaaagtggttattgaactgcttttatcggtctct
ggagttgctaaaccttcccaggtgtattttggaggtacagttgtcggggagcaagctatg
aaatctgaagatgaagtaggaagtttgatagagtatgaattcagggtgattaatttaggt
aaacctcttaaaaacctcggcacagcaaccttgaatattcagtggccaaaagaaattagc
aatggcaaatggttgctttatttggtgaaagtagaatccaaaggattggaaaagataatg
tgtgagccaaaaagtgaaataaacctcctgaacctaaaggagtctcacaactcaagaaaa
aaacggtcaattgctgaaaaacagattgatgatagcagaaaattttctttatttgctgaa
agaaaataccagaccctgaactgtagtgtgaacgtgaggtgtgtgaacatcaggtgtcct
ctgcgtgggctggacagcaaggcctcccttgttttgcgctcaaggttatggaacagcaca
tttctagaggaatattccaaactgaactacttggacattcttgtgcgagcttctattgat
gtgactgatgccgctgagaatatcaagctgccaaatgcaggcacccaggttcgtgtgact
gtgtttccttcaaaaactgcagctcagtactctggagtaccttggtggatcattcttgtg
gctattcttgctgggattttgatgcttgctctattagtgtttttactatggaagtgtgga
ttctttaagcgctctaggtacgatgatagcgttccccgataccatgctgtaaggatccgt
aaagaagagcgagagatcaaagatgaaaaatacaatgataaccttgaaaaaaaacagtgg
gtcacaaagtggaatgaaaatgaaagttactcctag
DBGET
integrated database retrieval system
