Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101954858
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Entry
101954858 CDS
T10664
Symbol
Cul4a
Name
(RefSeq) cullin-4A isoform X1
KO
K10609
cullin 4
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03420
Nucleotide excision repair
iti04120
Ubiquitin mediated proteolysis
iti05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101954858 (Cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
101954858 (Cul4a)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101954858 (Cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101954858 (Cul4a)
03400 DNA repair and recombination proteins [BR:
iti03400
]
101954858 (Cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iti04147
]
101954858 (Cul4a)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
101954858 (Cul4a)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101954858 (Cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
101954858 (Cul4a)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101954858 (Cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
101954858
NCBI-ProteinID:
XP_013216177
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MQLWDHACPRLPGDRLQPGSADAAGAARALRGPWAQGVTAVAASDDCSLLQAVENLCSHK
VSATLYKQLRQVCEDHVQAQILPFREDALDSLVFLKKMDTCWQDHCRQMIMVRGIFLFLD
RTYVLQNSLLPSIWDMGLELFRNHIISDKTVQSKTIDGILLLIERERSGEAVDRSLLRSL
LGMLSDLQVYKDSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITY
LDHSTQRPLIACVEKQLLGEHLTAILQKGLDHLLDENRVPDLTQMYQLFSRVKGGQHALL
QHWSEYIKTFGTAIVINPEKDKDMVQDLLEFKDRVDHVVEVCFQRNERFVNLMKESFEAF
INRRPNKPAELIAKHVDSKLRAGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDL
AKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVHFKQHMQNQSA
PGPIDLTVNILTMGYWPTYTPMEVHLPPEMVRLQEVFKAFYLGKHSGRKLQWQTTLGHAV
LKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKAR
VLIKSPKGKEVEDGDKFLFNAEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQID
AAIVRIMKMRKTLGHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERDKDSPNQYHY
VA
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgtgggaccacgcctgccccaggctccctggggaccgactgcagccaggctca
gcagatgcagcaggagcagcaagggccctgcgtggcccctgggcacaaggggtgacggct
gttgctgccagtgatgactgctccctcctgcaggctgtggagaacctctgctctcacaaa
gtctccgccacgctctacaagcagctgcgccaggtctgcgaggaccacgtccaggctcag
atcctccccttcagagaagacgcactggacagccttgtgttcctgaagaagatggacacc
tgctggcaggaccactgcagacagatgatcatggtcagaggcatcttcctgttcctggac
cgcacctatgtcctgcagaactccctgctgccctccatctgggacatggggttggagctg
ttcagaaaccacatcatcagtgacaagacggttcagagcaagaccatcgatgggatcctt
ctgctgatcgaacgggagcgcagcggggaggctgtggacaggagcctgctgcgcagcctg
ctgggcatgctctcggaccttcaggtatataaagattcgtttgagctgaaatttttagaa
gaaactaattgtttatatgctgcagaaggccaaagattaatgcaagagagagaggtcccc
gagtacctaaaccatgtgagtaagcgcctggaggaagagggagaccgcgtgatcacgtac
ctggaccacagcacgcagagaccactgatcgcctgtgtagagaagcagctgctgggagaa
cacttgacagcgattctgcagaaagggcttgaccacctgctggacgagaacagagtgccc
gacctcacgcagatgtaccagctgttcagccgtgtgaagggcgggcagcatgcgctgctg
cagcactggagcgagtacatcaagacttttgggacagcaattgtcatcaaccctgagaag
gacaaggacatggtgcaggacctgctggagttcaaggacagggtggaccacgtggtggag
gtgtgcttccaaaggaatgagcgcttcgtcaacctgatgaaggagtccttcgaggccttc
atcaaccggaggcccaacaagcccgccgagctcatcgccaagcacgtggattccaagctc
cgggcgggcaacaaggaggccacagacgaggagctggagaggattctggacaagatcatg
atcctcttcaggttcatccatggcaaagatgtctttgaagcattttataagaaagatttg
gcaaagagactcctcgttggaaaaagtgcctcggttgatgctgaaaagtcgatgctgtcc
aagctcaagcatgagtgcggggccgcattcaccagcaagctggaggggatgttcaaggac
atggagctctccaaggacatcatggttcacttcaagcagcacatgcagaaccagagtgcc
ccaggccctatcgaccttaccgtgaacatcctcaccatggggtactggcccacctacaca
cccatggaagtgcacctgcctccggagatggtccggctccaggaggtgttcaaggccttc
tacctgggcaagcacagcggacggaagctgcagtggcagaccacgctggggcacgctgtc
ttaaaagcagagtttaaggaggggaagaaagagttccaggtgtccctcttccagacgttg
gtgctgctcatgttcaatgagggagacggattcagctttgaggagataaaaatggccacc
gggatagaggacagtgaactgagaagaacgctgcagtccctggcctgtggcaaggcgcgt
gtcctgatcaaaagccccaaaggaaaggaggtggaggacggggacaaattcctcttcaat
gcagagttcaagcacaagctctttagaatcaagatcaaccagatccagatgaaggaaacc
gttgaagaacaagtgagcactaccgagagagtgtttcaggataggcaataccagattgat
gctgctatagtcagaatcatgaagatgaggaagactcttggtcacaatcttctagtttct
gagctgtataaccagctgaagtttccagtcaagcctggagacctgaagaagagaatcgag
tctctgatagaccgagactacatggagcgtgacaaggacagtcccaaccagtaccactac
gtggcctga
DBGET
integrated database retrieval system
