Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101954995
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Entry
101954995 CDS
T10664
Name
(RefSeq) protocadherin beta-5-like
KO
K16494
protocadherin beta
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Protocadherins
101954995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101954995
NCBI-ProteinID:
XP_040129288
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MQTALAKPPQKRQVIFLAILLFWWGADSKAIRYSIPEETESGYSVANLAKDLGLRVGELA
TRGARIHHKGSKQLLQLDVKTGNLLLQEKLDREVLCGATEPCVLHFQLLLENPVQLFQVD
VQLIDVNDHSPEFLDREMILRIPESVQPGSVFALKSAQDLDMGSNSVQNYTISPNFYFRV
AIHNRGDGRKYPELVLGKALDREEESELRLTLTALDGGAPPRSGTVIVRIEVVDINDNAP
EFLQSLYEVQVPENSPINSLVLVVSARDLDAGTYGRVFYSLFEGDEVSQPFVIHEKTGEI
RLQRVLDFEATQYYIVEIVATDGGGFLGKCTVAIEVVDVNDNAPELTMSTLSSSIPENSP
ETVVAIFSVSDPDSGDNGRMVCSERDAARHRLVVLVKDNGEPPLSASVTLHVLLVDGFSQ
PYLPLPEEAPERAQGDSLTVYLVIALASVSSLFLFSVLVFVAVRLCRRRRAAPLGVCSVP
EGHFPGHLVDVSGTGTLSQSYQYEVCLAGNSGSGEFKFLKPIFPNLLLQNTGN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgctctagcaaaacccccgcagaaaaggcaagtcatttttcttgctatactg
ttgttttggtggggggctgactctaaggcgattagatattccattccagaagaaacagaa
agcggctactctgtggccaacctggcaaaagatctggggctcagggtgggggagctggcc
actcggggagcacgaatccatcacaaaggcagcaaacagctcttgcagcttgatgtaaaa
accggcaatttgcttctacaggaaaaactagaccgggaggtgctgtgtggggctacagaa
ccctgtgtattgcatttccaactgttactggaaaacccagtgcagttgtttcaagttgat
gtgcaactcatagatgtaaatgaccattctccagagttcctagacagggaaatgatcctt
agaatcccagagagcgtccagccagggtctgtgtttgctttgaaatcagctcaggacttg
gacatgggtagcaacagtgttcagaactacacaatcagccccaacttctattttcgtgtt
gctattcacaatcgcggtgatggcagaaaatacccagagctggtgttgggcaaagccctg
gaccgggaggaagagtctgagcttcgtttaactctcacagccctggatggtggggcgccg
cccaggtctgggactgtcatagttcgcattgaggtggtagacattaatgataatgccccc
gaatttttacagtccctgtatgaggtacaggttcctgagaacagtcccataaactcctta
gttctcgttgtctctgctcgagatttagatgcaggaacttatgggcgtgtattctattct
ttatttgaaggtgatgaagtttctcaaccatttgtaatacacgaaaaaacaggagaaatt
cgtctgcaaagggtattggattttgaggcaactcaatattatatcgtggaaattgtagcc
acagatggtgggggctttttgggaaaatgcacagtggccatagaagtggtggatgtgaat
gacaatgctcctgaactaaccatgtcgacactcagcagctctatcccagaaaactcccca
gagactgtagttgccattttcagcgtttctgatccagactctggggacaatggtaggatg
gtttgcagcgagcgcgacgcagccaggcacaggctggtggtgctggtcaaggacaatggc
gagcctccgctgtctgccagcgtcacgctgcacgtgctgctggtggatggcttctcccag
ccctacctgccgctccctgaagaggcgcccgagcgcgcgcagggggactcgctcactgtc
tacttggtcatcgccttggcatcggtgtcatcgctcttcctcttctctgtgctggtgttc
gtggcggtgaggctgtgcaggaggcgcagggcggcgccgctgggtgtctgctctgtgcct
gagggccactttcctggccacctggtggatgttagcggcactgggaccttgtcccagagc
taccagtatgaggtatgtcttgctggaaactctgggtctggtgagttcaagttcctgaaa
ccaatattccccaatctcttgcttcagaacactgggaactaa
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