Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955056
Help
Entry
101955056 CDS
T10664
Symbol
Whamm
Name
(RefSeq) LOW QUALITY PROTEIN: WASP homolog-associated protein with actin, membranes and microtubules
KO
K20479
WASP homolog-associated protein with actin, membranes and microtubules
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101955056 (Whamm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101955056 (Whamm)
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
101955056 (Whamm)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
101955056 (Whamm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
ZnuA
Motif
Other DBs
NCBI-GeneID:
101955056
NCBI-ProteinID:
XP_040132133
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MEDEQPDSLEGWVPLREDLFSSPERHQLRFLVAWNDAEGQFAVTCHDRTAQRRRXAXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAALWPPLERSFPQLPPELDVAGCGARDRG
RGLWALVWPVRVGLGETALQELCGQLERYLAEAADGCGGVTVRDALFPAESGAADCESPH
ELRERALRARRAEAGARLHQVLQGHEKANNMVSLMKIYQEEDEAYHELVTMATMFFQYLL
QPFRDMREVATLCKLGILKSLDEDNLGPKRVVALQKEAKEWSRRAEEAVVSIQEITVNYF
KETVKALAGMQKQMEQDGRRFGQAAWATATPRLEKLKLMLARETLQLMRAKELCLNHKRA
QIQRKVEDLPEQEKNIHVVDELEIQYYEIQLELYEVKFEILKNEEILLTTQLNSIKRLIK
EKQDEVVYYDPCESPEELKGMDHIADLQHGGNLEVKELSLQCQKLEAKRGRICARRASLR
NRKDQCKENHRLRLQQAEESTRYFHQHHSIQMKRDKIKEEEQKKKEWINQERQKTLQRLR
AYKEKYSVQSLQQTSCSEPGTPNLPADLPQQRSSPVSQLVSVAPPCSRKARSAPLVPEVC
TKKTPKDQDYHRNIPVQIFVPVGDRTHFKSSEELSLSPPXXXXXXXXXXXXXXXXXXXXX
XXXXQAANHWNLGLGTRVKDDQPRSLVCGSPAERPPNSLESFQCPGSMDEVLASLRHSRS
PLQEAEVPFSPAPRTSVNEHILAAIRQGVKLRKVHTDLGSGLSDKPTSDLERSIKAALQR
IKRVSADSEEDSDEQSPSEWDH
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgagcagcccgatagcctggagggctgggtgccactccgagaggatcttttc
agctcacccgaacggcaccagttgcgcttcctggtggcctggaacgacgcggagggccag
ttcgctgtgacttgtcacgaccgcacggcgcagcggcggcggncggcgtgnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctggcggcgctgtggccgcccctggaacgc
agcttcccacagctaccgcccgagctggacgtggctggctgtggggccagggaccgcggg
cgcgggctgtgggcgctagtgtggccggtgcgcgttggcctcggagagacggcgctacag
gagctctgcgggcaactggagcgctatctggccgaagcggctgacggctgcggcggtgtc
actgtgcgcgacgcgctcttccccgcggaaagcggcgcggccgactgcgagagcccgcac
gagctccgggagcgggccttgcgcgcgcggcgggccgaggcgggagcgcggctgcaccag
gttcttcaaggacatgaaaaagccaacaacatggtatcattgatgaaaatttatcaagag
gaagatgaagcttatcatgaattggttactatggcaaccatgttcttccagtatttactg
cagccattcagggacatgcgggaagttgcaactttatgtaagcttggtattttgaagtcc
ctggatgaggataatctgggtcctaaaagggtagttgccctgcagaaggaagccaaagaa
tggagcagacgtgctgaagaagctgttgtctctattcaggagatcactgtgaattatttt
aaggaaacagtaaaagcattagcaggaatgcagaaacaaatggaacaggatgggaggaga
tttggccaggctgcctgggccacagccactcccagattagaaaaactcaagctcatgcta
gctcgagagaccctgcaactcatgagagccaaggagctgtgtttaaatcacaaaagagcg
caaattcagagaaaggtggaagatcttccagaacaagaaaaaaatatacatgttgtagat
gaattagaaatacaatattatgaaattcaattggaactatatgaggttaaatttgagata
ttaaaaaatgaagaaatacttcttactacacagctgaactctattaaaagacttataaaa
gagaaacaggatgaagttgtctattatgacccgtgtgaaagtccagaggaacttaaaggt
atggatcatatagccgacctgcaacatggtgggaacttagaggtgaaagaactcagcttg
cagtgccagaagctggaggccaaacggggcaggatctgtgccaggagagcctcgctcagg
aacagaaaggatcagtgcaaagaaaaccatcggctcagattgcaacaggctgaagaaagt
acaagatattttcatcagcatcatagtattcaaatgaaaagagacaaaataaaagaagag
gagcaaaagaaaaaagagtggataaaccaagaacgccagaaaacactccagcgattaaga
gcctataaagagaaatactcagttcagtccttacagcagacatcctgctcggaacccggg
actccaaacctgccagctgaccttccccagcagaggtcctcaccagtttctcagcttgtg
tcagtcgctcccccatgctcacggaaggcccgaagcgctcctcttgtacctgaagtttgt
actaagaaaacccccaaggatcaagactatcacagaaatatccctgtccagatttttgtt
ccagttggtgaccgaacacacttcaaatccagtgaagagctgtcattgtccccaccnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnctcaagctgccaatcattggaacttaggtcttggaactcgggtaaaagat
gatcagccacgttctctagtgtgtgggtcacctgctgagagaccacccaattccttggaa
agttttcaatgcccaggatctatggatgaagtgttggcctccttaaggcacagcagaagc
cctctccaggaagcggaagtgcccttttcacctgctccccgcacgtcagtcaacgagcac
attctggctgccataagacaaggggtgaaactaaggaaagtccacacagacttgggctca
ggcctcagtgacaagccaaccagtgacctagagaggagcattaaagctgcactccaaaga
atcaagagagtgtctgctgactcagaggaagacagcgatgagcagagccccagcgagtgg
gaccattaa
DBGET
integrated database retrieval system
