Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955091
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Entry
101955091 CDS
T10664
Symbol
Pja2
Name
(RefSeq) E3 ubiquitin-protein ligase Praja-2
KO
K10634
E3 ubiquitin-protein ligase Praja2 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101955091 (Pja2)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101955091 (Pja2)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101955091 (Pja2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
EHMT1-2_CRR
Motif
Other DBs
NCBI-GeneID:
101955091
NCBI-ProteinID:
XP_005327278
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MSQYTEKEPSAMDQDSNKAGWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAG
DDYEVLELDDVPKENSSGSSALDQDHSLPNEPIFEKSETEIPTCGTALDQTIESSPPAAA
VHQSEEGREILGSSENVPNHSEGEYTPGACNASSVQNGIALVHTDSYDPEGKHGEDNDHL
QLSVQVVEGDKYQDALGNTVIELENGEAEAYNGLSPVPSLNCEIRDEFEVLDSAPLVKNS
TGDTELVHQNGQELKRSSSEDEVVRKKQDNTDQERQIENSTEDATCIPERICSEQNGSDR
DKNRGSSPEQVVRPKVRKVISASQVDQEVGFNRHEAKQRSVQRWREALEVEESGSDDPLI
KCEEYDGEHDCMFLDPPYSRVTQRETEHHHVTPESGATAGRQEVRDNSFWNGCGDYYQLY
DKDEDSSECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEPELQSDSSGPEEEN
QELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPANEFAQPEAFMLDGNNNLEDDSS
VSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDV
EVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSEYIKDDIATELPCHHFFHKPCV
SIWLQKSGTCPVCRRHFPPAVIEASAPASSEPDPDAPPSNDSTAEAP
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagtacactgaaaaggagccatcagcaatggatcaagactccaacaaggctggt
tggcccaaaccagcaggaggctatcagacaattacaggcaggagatatggaagaagacat
gcctatgtcagttttaaaccatgtatgaccagacatgaaagaagcttaggtcgggctggt
gatgactatgaagtgttggaactagatgatgttccaaaggaaaattcctcaggttccagt
gcattggatcaagatcattctttacccaatgaacccatatttgaaaaaagtgaaacagaa
attcccacctgtggtacagcattggatcaaaccattgagagcagtccacctgctgctgct
gtgcaccagagtgaggaaggcagggagatcttaggaagcagtgagaatgttcctaatcac
tctgagggagagtacactccaggagcgtgtaatgcctcaagcgtccaaaatggaattgcg
ttggttcatactgactcttatgatccagaaggcaaacacggagaggataatgaccatctt
caactttctgtacaagttgtggaaggtgataagtatcaggatgcattaggcaatacagta
attgagttggaaaatggagaggcagaggcatacaatggtctttcaccagttccctctctt
aactgtgaaataagagatgagtttgaagtgttagattcagcacctttagtgaaaaattcc
actggtgatactgagcttgtccatcagaacggccaggaattaaagaggtcctcttctgaa
gatgaagttgttagaaagaaacaagataatactgaccaggaaagacaaatagaaaattca
actgaagatgccacctgtattcctgagcggatttgtagtgaacaaaatggcagtgatagg
gacaaaaaccgtggaagttctcctgaacaggtagtgaggccaaaagttagaaaagtgata
agtgcaagtcaggtggaccaagaagtgggttttaataggcatgaggctaaacaaagaagt
gttcagagatggagggaggctttggaagttgaggagagtggctcagatgaccccttaata
aaatgtgaagaatatgatggagaacatgactgtatgttcttggatccaccctactcaaga
gttacacaaagggaaacagaacatcaccatgtaacacctgaaagtggagccacagccgga
aggcaagaagttcgggataacagcttttggaatggctgtggagattattaccaactctat
gacaaagatgaagatagttcagaatgtagtgatggggaatggtctgcttctttgcctcat
cgattttctggtacagaaaaagatcagtcctcaagtgatgaaagctgggagactctgcca
ggaaaagatgagaatgaacctgagctgcagagtgatagcagtggccctgaagaagaaaac
caagaattatctcttcaggaaggggaacagacatctttggaagagggagaaattccttgg
ttacagtacaatgaagtcaatgaaagcagcagtgatgagggcaatgagcctgccaatgaa
tttgcacaaccagaagctttcatgttagatggtaacaacaaccttgaagacgactccagt
gtgagtgaagacttagatgtggactggagcctatttgatggctttgcggatggactggga
gtggctgaagctatttcttatgtggatcctcagttcctcacctatatggcactggaagaa
cgcttagcccaggctatggagactgcactggcacatttagagtctctggcagtggatgtt
gaggttgccaatccaccagccagtaaggaaagcattgatggtcttccagaaacccttgtt
cttgaagatcacactgctattggtcaggaacaatgctgtccaatctgttgcagtgagtat
attaaggatgatatagcaacagagttgccctgtcaccatttctttcacaagccttgtgtc
tcaatttggctacagaagtcgggaacatgccctgtgtgccgccgtcatttcccacctgca
gttatcgaagcatctgcacctgcttcctccgaacctgatcctgatgccccaccttcaaat
gacagtactgcagaagccccctaa
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integrated database retrieval system
