Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955118
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Entry
101955118 CDS
T10664
Symbol
Slc6a13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04082
Neuroactive ligand signaling
iti04721
Synaptic vesicle cycle
iti04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101955118 (Slc6a13)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
101955118 (Slc6a13)
04721 Synaptic vesicle cycle
101955118 (Slc6a13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
iti02000
]
101955118 (Slc6a13)
Transporters [BR:
iti02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101955118 (Slc6a13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
WHD_4th_Lhr
Motif
Other DBs
NCBI-GeneID:
101955118
NCBI-ProteinID:
XP_005334020
UniProt:
I3LXL0
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MDSKVSGTTSNGETKPVYPVMEKAEEDGTLERGHWNNKMEFVLSVAGEIVGLGNVWRFPY
LCYKNGGGAFFIPYLIFLFTCGIPVFLLETALGQYTSQGGITAWRKICPIFEGIGYASQM
IVILLNIYYIIVLAWALFYLFSSFTTDLPWGSCHHEWNTENCVEFQKTNGSLNVTTENAT
SPVIEFWERRVLKISDGIQHLGALRWELVLCLMLAWVICYFCIWKGVKSTGKVVYFTATF
PYLMLVVLLIRGVTLPGAAQGIQFYLYPNLTRLWDPQVWMDAGTQIFFSFAICLGCLTAL
GSYNKYHNNCYRDCIALCFLNSGTSFVAGFAIFSILGFMSQEQGVPISEVAESGPGLAFI
AYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVCVESLVTALVDMYPRVFRKKNRREILI
LAVSVVSFLVGLVMLTEGGMYVFQLFDYYAASGMCLLFVAIFESLCVAWVYGARRFYDNI
EDMIGYRPWPLIKYGWLFFTPAVCTATFLFSLVKYTPLTYNKKYTYPWWGDALGWLLALS
SMVCIPAWSLYKLSTLKGSFRERIRQLTCPAEDLPKWNQGGPPAPATHTTSLLRTSLKEP
ESHC
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggatagcaaggtctcaggcacaaccagtaatggagagacaaaacctgtgtatccagtc
atggaaaaagcggaggaagatggcaccctggagcgagggcactggaacaacaagatggag
tttgtgctgtcagtggctggggagatcgttggcttaggcaacgtctggaggtttccctat
ctctgctacaaaaatgggggaggtgctttctttatcccttacctcattttcctctttacc
tgtggcattcctgtcttcctcttggagacagcgctgggtcagtacacaagccagggaggt
atcacagcctggaggaagatctgccccatcttcgagggtattggctatgcctcccagatg
atcgtcatcctccttaacatctattatatcattgtcctggcctgggccctcttctacctc
ttcagcagcttcaccaccgacctcccctggggaagctgccaccatgagtggaatacagag
aactgtgtggagttccagaagaccaatggatccctgaatgtgaccactgagaatgccacg
tcccctgtcatcgagttctgggagaggcgggtcctgaagatctctgatggcatccagcac
ctgggggccctgcgctgggagttggtcttatgtctcatgctcgcatgggtcatctgctac
ttctgcatctggaagggggtcaagtccacaggcaaggtggtgtacttcacagccacattc
ccttacctcatgctggtagtcctgttaattcgaggagtgacactacctggtgccgcccaa
ggaatccagttttatctgtaccccaacctcacacgtctgtgggatccccaggtgtggatg
gacgctggcacccagatcttcttctcctttgccatctgtttgggctgcctcacggccctg
ggcagctacaacaagtatcacaacaactgctacagggactgcattgccctctgcttcctc
aacagtggcaccagctttgtggccgggtttgccatcttctccatcctgggattcatgtct
caggagcagggggtgcctatttctgaggttgctgagtcaggccctggcttggccttcatc
gcctaccctcgggctgtggtgatgctgcccttctctcccctctgggcctgctgtttcttc
ttcatggtcgttcttctgggactagatagccagtttgtgtgcgtagagagcctggtgacg
gcgctggtggacatgtatccccgggtgttccgcaagaagaaccggagggagatcctcatc
cttgcagtgtctgtcgtctccttcctggtggggctggtcatgctcacagagggtggcatg
tacgtgtttcagctctttgactactatgcagccagtggcatgtgcctcctgttcgtggcc
atctttgagtctctttgtgtggcttgggtttatggagccaggcgcttctatgacaacatt
gaagatatgattgggtacaggccatggcctcttatcaaatatggttggctctttttcacg
ccagctgtgtgcacggccaccttcctgttctccctggtcaagtacactccactgacctac
aacaagaagtacacatacccatggtggggtgatgccctgggctggctcctggctctgtcc
tccatggtctgcattcctgcctggagcttatacaaactcagcactctcaagggctccttc
agagagagaatccgccagctcacatgcccagctgaggacctgcccaaatggaaccaagga
ggaccccctgcccctgccacacatacaacgtcacttctcagaacgtcactcaaagaaccc
gagtctcactgctag
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