Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955158
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Entry
101955158 CDS
T10664
Symbol
Depdc5
Name
(RefSeq) LOW QUALITY PROTEIN: GATOR complex protein DEPDC5
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
101955158 (Depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101955158 (Depdc5)
Membrane trafficking [BR:
iti04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
101955158 (Depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
101955158
NCBI-ProteinID:
XP_040146847
LinkDB
All DBs
Position
Unknown
AA seq
1567 aa
AA seq
DB search
MRTTKVYKLVIHKKGFGGSDDELVVNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSIDEFPEINQA
SIRQDHKGRFYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSAPRDSRLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKPASEKAKNGRDTSLGTPKESENALPIQVDYDAYDAQVFRLPGPSRAQRLAT
CRSVRERENHNRKSASSCDVSSSPSLPNRALPTEEVRSQASDDSSLGKSANILMIPHPHL
HQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDPTHSSAELLE
LAYHEAAGRHSTSRQPGDGLSFLNFSGTEELSVSLLSNSGAGTNPRIQNKDSLEDNVSTS
PDPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPEADMDRLVQK
KQLPVVGMNLSQLEEVLLFFLLGLVSRNRPEEEDQYWLSMGRTFHKVTLKDKMITVTRYL
PNLPFELVSEMKPCAVSSDDSTPVERWNLAYQSERDHLEHFKYLIFLTTTLCFPXSSXSL
IESLKFWRTRFLLLPACVTATKRITEGEVHCDIYGDRPRADEDEWQLLDGFIRFVEGLNR
IRRRHRSDRMMRKGTAMKGLQMTGPISTHSLESTGPTAGKKTSALSALLEMEASQKCLGE
QQAALHSGKSSTQSAESSSVAMTPTYVDSPRKDGAFFMEFVRSPRTASSTFYPQVSLEQT
VIPVLDNTSLGVSTGQSVDRGNSQTFGNAQNIGEQAFPSANSSDSSSQQQAASSLTSSST
LAEILEAMKHPSTGVQLLSEQKGLSPCCFISAEVVHWLMNNVDGVHTQAMAIDIMQKMLE
EQLIMHASGEAWRTFIYGFYFYKIVMDKEPDRVAMQQPTATWHTVGVDDFASFQRKWFEV
AFVAEELLHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTL
DVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLL
VPVLEGPFALPSYLYGDPLRAQLFIPLNISCLLKEGSEHLFDSFEPETYWDRMHLFQEAI
AHRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFLQLPYSKRKFSGQQRRRRNSTSSTNQ
NMFCEERVGYNWAYNTMLTKTWRSSATGDEKFADRLLKDFTDFCINRDNRLVMFWTSCLE
KMHASAP
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaacaaaggtctacaaactggtcatccacaagaagggctttgggggcagtgat
gatgagctagttgtgaaccccaaagtgtttcctcacatcaagcttggagacattgtggag
attgctcaccccaacgatgaatatagccctttgcttttgcaagtcaagtcacttaaggag
gatttacaaaaagaaactatcagtgtggaccagactgtgactcaagtgttccggctaaga
ccttatcaagatgtatacgtgaatgttgtagaccctaaagatgtgacccttgacctagtg
gaattaacttttaaggatcagtacattggccgaggggatatgtggcgactaaagaaaagt
ttggtcagcacatgtgcctatatcacccagaaggtggaatttgctggcatcagggcacaa
gctggtgagctgtgggtcaagaatgagaaggtcatgtgtggttatatcagtgaagatacc
agggtggtgttccgttctacgtcagctatggtttacatatttattcagatgagctgtgaa
atgtgggattttgatatttatggggatctgtattttgagaaagctgtgaatggtttcctt
gctgatctatttaccaagtggaaggagaagaattgtagtcatgaagtgacagtggttctg
ttttctagaactttctatgatgcaaaatctattgatgaatttcctgaaataaatcaagcc
tcaattcgacaggatcacaaagggcgattctatgaagacttttacaaagtggttgtgcag
aatgagagaagagaagaatggacttcacttctagtgaccattaaaaagctcttcatccag
tatccagttttggtgcgactggaacaggcagagggctttcctcaaggagataattctacc
tcagcacaaggaaactacctagaggccatcaatctgtcattcaatgtgtttgacaagcac
tatatcaaccgcaactttgaccggactgggcagatgtctgtggtgatcacgcctggggtg
ggtgtctttgaagtggaccgcctactcatgattttgaccaaacaacggatgatagataat
ggaattggtgtagacttggtgtgcatgggagagcaaccattacatgctgtcccattgttc
aagctacacaatcggagtgctcctcgagattctcggctgggtgatgactataatattcct
cattggataaaccacagtttctacacatccaaaagccagcttttttgtaacagtttcacc
ccacgaattaaactggccggaaagaagcctgcctctgaaaaagcaaaaaatggacgtgat
acatctcttgggactccaaaagaatctgagaatgcccttccaatccaagtagattatgat
gcctacgatgctcaagtgttcaggctgcctggcccatcccgggctcagcgcctcgccacc
tgcaggtctgtgcgggagcgggagaatcacaatcgcaagagtgccagctcttgtgatgtc
tcatccagtccttcccttccgaaccgtgcactacccactgaggaagtaagaagccaggct
tctgacgacagctccctgggcaaaagtgccaacatcctgatgatcccacacccccacctg
caccagtatgaagtcagcagctccttgggctacaccagcactcgagatgtcctggagaac
atgatggagccaccacagcgagactccagtgcaccagggaggttccatgtaggcagtgca
gagtccatgctacatgttcgacctggtggatacacaccccagagagcactgattaacccc
tttgccccctcacggatgcctatgaagctcacgtccaatagaagacgttggatgcacact
tttcctgtgggaccatctggagaggcgattcagatccatcatcagacccggcagaatatg
gcggagctgcagggcagtgggcagagggatccaactcactcctctgcagagctgttggag
ttagcatatcatgaagcagctggaagacacagcacttcccgccagcctggtgacggcttg
tccttcttgaacttcagtggaacagaagaactttctgtcagcctgcttagcaacagtggt
gcaggtacgaatcctaggattcaaaataaggattctctagaggacaatgtttctacctct
ccagacccaatgccaggcttctgttgcacagttggagtggactggaagtctctcactact
ccggcatgcctccccctcaccaccgactacttccccgaccgccagggcctgcagaatgac
tacacggaaggctgctatgatctcctgccggaagcagacatggacaggttggttcagaaa
aagcaattgcctgttgtaggaatgaacctcagccagttggaggaagtcttattatttttc
ctattaggccttgtgtcccgaaatcgccctgaggaggaggaccagtattggttgagtatg
ggcagaactttccacaaagtgacactgaaggacaagatgatcacagtaactcgatacctt
cccaatcttccttttgagcttgtgtctgaaatgaagccatgcgctgtatcatcagatgac
agcacaccagtggaaaggtggaaccttgcataccaatcagagagagatcacttggagcac
tttaagtatctaatttttcttaccactactttgtgttttccttgatcctctngtagctta
attgaatctctgaagttctggaggacccgcttcctgcttttgccggcctgtgtcactgcc
accaagcgcatcacagagggggaggtccactgcgacatctatggggatagacctcgtgct
gatgaggatgagtggcagctcctggatggctttatccgttttgtggagggtttgaaccgg
atccgcaggcggcatcgctcagatcgcatgatgcggaaaggaactgccatgaaaggcttg
cagatgactgggcccatttccacacactcccttgagtctacaggtcccactgctgggaag
aaaacctcagctctgtctgccctgctagagatggaggccagtcagaagtgtctgggagaa
cagcaggcagctctgcacagtggaaaaagctctacccaatcagctgagagcagcagtgtt
gcaatgactcccacctatgtggacagcccacgaaaggatggggccttctttatggagttt
gtccgcagtccacgcacagcatcatctaccttctaccctcaggtatctctggaacaaact
gtcattccggtgttggataacaccagtttgggggtaagcacaggtcaatctgtggacaga
ggcaacagccagacctttgggaacgctcagaacataggagaacaggcctttccatctgca
aactctagtgacagcagttctcagcagcaggcagcaagctccttgacatcatcttctacc
ctggcagagatcctggaagccatgaagcatccctcgacaggagttcagttgctctctgaa
cagaagggcctctcgccatgctgctttatcagtgctgaggtggtgcactggctgatgaac
aatgtggatggggtccatacgcaggcaatggccattgacatcatgcagaaaatgctggaa
gaacagctcatcatgcatgcatctggtgaagcctggcggaccttcatctacggtttctat
ttctacaagatagtaatggacaaagagcccgaccgagtggccatgcagcaacccactgcc
acctggcacactgtaggcgtggatgactttgctagtttccagcgcaagtggtttgaggtt
gcctttgtggcagaagagctcttgcactctgagattcctgcctttctcctaccctggctg
cccagccggccagcctcctatgctagcaggcatagctcctttagccgcagttttggagga
cggagccaggcagctgcacttttagctgccactgtcccagagcagaggactgtgaccctg
gatgttgacgtgaacaaccgtacagaccggctggagtggtgcagctgttactaccatggt
aacttctccttgaatgcagcctttgagatcaagctacactggatggcagtgactgctgct
gtgctatttgagatggtccaaggttggcatcgaaaagctacctcctgtggctttttgttg
gtaccggtattggagggtccttttgcacttcccagctacttgtatggcgatcccctgcga
gcccagctcttcatcccgctcaatatcagctgcttactcaaggagggcagtgaacacctg
tttgatagctttgaaccagaaacatattgggatcgaatgcatctttttcaggaagccatt
gcacacaggtttggatttgtacaagataaatattctgcctctgcgtttaacttccctgct
gagaacaagcctcagtatatccatgttacaggaacagtgtttctgcagctgccctactcc
aagcgcaagttctcagggcagcagaggaggcggcggaactccaccagctccaccaaccaa
aacatgttctgtgaggaacgggttggctataactgggcctacaacaccatgcttaccaag
acatggcgctctagtgccacaggggatgagaagtttgcagataggctgctgaaagacttc
acagatttctgcatcaaccgtgacaaccgactggttatgttctggacgagttgcctagag
aagatgcatgccagtgccccatga
DBGET
integrated database retrieval system
