Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955163
Help
Entry
101955163 CDS
T10664
Symbol
Fip1l1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X2
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101955163 (Fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101955163 (Fip1l1)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101955163 (Fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
101955163
NCBI-ProteinID:
XP_005320059
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEMQDGRFGLFKVQQGR
TGNSEKETALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRS
ARAFPYGNVAFPHLTGSAPSWPSLVDTTKQWDYYARREKDRDRERDRDRERDRDRDRERE
RTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETR
HKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcggcaccggaggggat
gaggaggaagagtggctgtatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagacgaaaatgaagttgaaaggccagaagaagaaaatgccagcgctaatcct
ccatcaggaatagaagatgaaactgctgaaaatggcgtaccaaaaccgaaagtgactgag
acagaagatgatagtgatagtgacagtgatgatgacgaggatgatgttcatgtcactata
ggagatattaaaacaggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aatatcaagacagggggaagagtttatggaactacaggaacaaaggtcaaaggagtagat
cttgatgcacctggaagcattaatggagttccactcttggaggtagatttggattccttt
gaagataaaccgtggcgtaaacctggtgctgatctttctgattattttaattatgggttc
aatgaagatacttggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaa
gttataccagttacttctactacaaataaaattacggccgaagactgtactatggaagtt
acaccaggtgcagagatgcaagatggcagattcggtctttttaaggtacagcagggcaga
actggaaattcagagaaagaaacagcacttccatctacaaaagccgagtttacttctcct
ccatctttgttcaagactggactcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccaattcaagcgttgggaagtggcaggatcgatatggg
agggccgaatcacctgatctaaggagattacctggagcaattgatgttattggtcagact
ataactattagccgagtagagggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccacctccgtttttc
cctccaggagctcctcccacccaccttccaccacctccatttcttccaccacctccaact
gtcagcactgctccacctttgattccaccaccaggttttcctcctccaccaggtgctcct
cctccatctcttataccaacaatagaaagtggacattcctctggttatgatagccgttct
gcacgtgcatttccatatggcaatgttgcctttccccatcttactggttctgctccttca
tggcctagtcttgtggacaccaccaagcaatgggactattatgcaagaagagaaaaagac
cgagatagagaaagagacagagacagagagcgagatcgtgatagggacagagaacgagaa
cgcaccagagagagagagagggagcgtgatcacagtcctactccaagtgttttcaacagt
gatgaagagcgatacagatacagggaatatgcagaaagaggctacgagcgtcacagagca
agtcgagagaaagaagaacgacacagagaaagacgacacagagagaaagaggaaaccaga
cacaagtcatctcgcagtaatagtagacgtcgccatgaaagtgaagaaggagacagtcac
aggagacataagcacaaaaagtctaaaagaagcaaagaaggaaaagaagctggcagtgag
cctgcccccgaacaggagagcactgaagctgcacctgcggagtag
DBGET
integrated database retrieval system
