Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955236
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Entry
101955236 CDS
T10664
Symbol
Sort1
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04142
Lysosome
iti04722
Neurotrophin signaling pathway
iti04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101955236 (Sort1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
101955236 (Sort1)
09156 Nervous system
04722 Neurotrophin signaling pathway
101955236 (Sort1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
101955236
NCBI-ProteinID:
XP_040145050
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All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MPPAVMQFEEISTVDIQSVPHLGIRIQDPRSRRRREPMRSGPGKKDRRPAYAGGEARLRV
SKERQARARGCGAAPAGDCVRVPDFVAKLANNTHQHVFDDLRGSVSLSWVGDSSGVILVL
TTFHVPLVIITSEQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSGKVILTAE
VSGGSRGGRIFRSSDFAKNFVQTDLPFHPLTQMMYSPNNSDYLLALSTENGLWVSKNFGG
KWEEIHKAVCLAKWGSENTIFFTTYANVSCKADLGALELWRTSDLGKSFKTIGVKIYSFG
LGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANDDMVFMHVDE
PGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSTLSEDNSIQT
MITFDQGGRWKHLRKPENSQCDATAKNKKECSLHIHASYSISQKLNVPMAPLSEANAVGI
VIAHGNVGDAISVMVPDVYISDDGGYSWAKMLNGPHYYTILDSGGIIVAIEHSNRPINVI
KFSTDEGQCWQTYMFTKEPIYFTGLASEPGARSMNISIWGFTESLLTRQWVSYTIDFKDI
LERNCEEKDYTIWLAHSTDPEDYEDGCILGYKEQYLRLRKSSVCQNGRDYVVTKQPSICP
CSLEDFLCDFGYFRPENDSKCVEQPELKGHDLEFCLYGREEHLTTNGYRKIPGDRCQGGV
NPAREVKDLKKKCTSNYLSPKKQNSKSNSVPIILAIVGLMLVTVVAGVLIVKKYVCGGRF
LVHRYSVLQQHAEADGVDALDTTSHANKSGYHDDSDEDLLE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccacctgcagtgatgcagtttgaggaaatatctactgtagacatccaatcagtcccg
catcttggcatccgaatccaggacccccgaagccggagacgacgcgagccaatgaggagt
gggccagggaagaaggacaggcggccagcctatgcgggcggagaggcccggctgcgcgta
tccaaggagcgccaggctcgggctcgggggtgtggcgcagcgccggcgggggactgcgtt
cgggtcccagacttcgtcgcgaagctagccaacaacacgcaccagcatgtgtttgatgat
ctcaggggctcagtatccttgtcctgggttggagatagcagtggggttattctagtcttg
actaccttccatgtaccactggtaattattacttctgaacagtccaagctatatcgaagt
gaggattatgggaagaactttaaggatattacaaatctcatcaacaacacctttattcgg
actgaatttggcatggctattggtcctgagaactctggaaaggtgatattaacagcagag
gtatctggaggaagtcgtggaggaagaatcttcaggtcatcagattttgcaaagaacttc
gtgcagacagatctcccttttcatcctttgactcagatgatgtatagccccaataattct
gattacctgttagccctcagcactgagaatggcctgtgggtgtccaagaattttggggga
aaatgggaagaaatccacaaagcagtgtgtttggccaaatgggggtcagagaacaccatc
ttctttactacctatgcaaatgtctcctgcaaagctgatcttggggccctggaattatgg
agaacttcagacttgggaaaaagcttcaaaaccattggtgtgaaaatctactcatttggt
cttgggggacgtttcctttttgcctctgtgatggctgataaggatacaacaagaaggatc
catgtgtcaacagatcaaggggacacatggagcatggcccagcttccctctgtgggtcag
gaacagttctattctattctggcagcgaatgatgacatggtattcatgcatgtagatgaa
cctggagatactggatttggcacaatctttacctctgatgatcggggcattgtgtactcc
aagtctttggaccgacatctctacactaccacaggtggagagactgacttcacgaatgtg
acctccctccgcggggtctacataacaagcacgctctcagaagataattccattcagacc
atgatcactttcgaccaaggaggaaggtggaagcacctgcggaagcctgaaaacagccag
tgcgatgccaccgcaaagaacaaaaaagagtgcagccttcatattcatgcttcctatagc
atctctcagaaactaaacgtcccgatggccccgctctccgaggctaacgccgtaggcata
gtcattgctcatggtaacgtgggggatgccatctcggtgatggtcccagatgtgtacatc
tcagacgatgggggttattcctgggcgaagatgctgaatggaccccactattataccatc
ttggattctggaggcatcattgtggccattgagcacagcaaccgtcctatcaatgtgatt
aagttctccacagatgaaggtcaatgctggcaaacctacatgttcaccaaggagcccatc
tatttcaccggcctggcttcagaacctggagccaggtctatgaatatcagcatttggggg
ttcacagaatctttactaacccgccaatgggtctcctacaccattgattttaaagatatc
cttgaaaggaactgtgaagagaaggattataccatatggttggcacactccacagaccct
gaggattatgaagatggctgcattttgggctataaggaacagtacctacggctgcgcaag
tcgtccgtctgtcagaatggtcgagactatgttgtaaccaagcagccatccatctgtccc
tgttccttggaggatttcctctgtgattttggctacttccgtccagaaaatgactcaaag
tgtgtggaacagccagagctgaaggggcatgacctagagttttgtctatacgggagagaa
gaacacctgacgacaaatgggtaccggaaaattccaggagacagatgccaaggtggggtg
aatccagctcgagaagtaaaagacttgaaaaagaagtgcacgagcaactatctgagtccc
aaaaagcagaattccaagtcaaattctgttccaattatcttggccatcgtgggattgatg
ctggtcacagtcgtagcaggagtgctcattgtgaagaaatatgtgtgtggtggaaggttc
cttgtgcacaggtactcagtgctacagcagcacgcagaggctgatggtgtggatgctttg
gacacaacctctcatgctaataaaagtggttatcatgacgactcagatgaggacctcctg
gaatag
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