Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955275
Help
Entry
101955275 CDS
T10664
Symbol
Spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101955275 (Spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101955275 (Spast)
Enzymes [BR:
iti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
101955275 (Spast)
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
101955275 (Spast)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
101955275 (Spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
AAA_14
Mg_chelatase
MIT
IstB_IS21
DUF815
AAA_24
nSTAND3
NPHP3_N
AAA_2
DUF4368
DUF2515
Motif
Other DBs
NCBI-GeneID:
101955275
NCBI-ProteinID:
XP_005322527
UniProt:
I3MVJ7
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MSSPGGRGKKKGSGGPSSPVPPRPPPSCQAPAPHAAGPAPPPRSPHKRNLYYFSYPLIVG
FALLRLVAFHLGLLFVWLCQRFSRALMAAKRSSRAAPAPASASPPAPEPGGEAEHVRAFH
KQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAK
MMTNLVMAKDRLQLLEKLQPVLQFSKSQTDVYNDNTNLTCRNGHLQSESGAVPKRKDPLT
HASNSLPRSKTVLKTGSTGLSGHHRAPSCSGLSMVSGARQGPGPAAATHKGTPKTNRTNK
PSTPTTAPRKKKDLKNFRNVDSNLANLIMNEIVDNGTAVKFDDIAGQELAKQALQEIVIL
PSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGE
KLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSAGDDRV
LVMGATNRPQELDEAVLRRFIKRVYVSLPNEETRLLLLKNLLCKQGSPLTQKELAQLARM
TDGYSGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSVSPQT
LEAYIRWNKDFGDTTV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccgggtggacgagggaagaagaaaggctccggcggccccagcagcccggtg
cctccgaggcctccgccctcctgccaggcccccgcccctcacgctgccgggccggcccct
ccgccccggtcgccgcataagcggaacctgtattacttctcctacccgctcatcgtaggc
ttcgcgctgctgcgtctggtggccttccacctggggctcctcttcgtgtggctctgccag
cgcttctcccgcgccctcatggccgccaagaggagctcccgggccgcgccggcgccagcc
tcggcctcgccccctgcgcccgagccgggtggcgaggccgagcacgttcgggccttccac
aaacaggccttcgagtacatctccattgccctgcgcatcgatgaggacgagaaagcaggt
cagaaggagcaagctgtggaatggtataagaaaggtattgaagaactagaaaaaggaata
gctgttatagttacaggacaaggtgaacagtgtgaaagagctagacgccttcaagctaaa
atgatgactaatttggttatggccaaggatcgtttacaacttctagagaagctgcaacca
gttttgcaattttccaagtcacaaacggacgtctataatgacaatactaacttgacatgc
cgaaatggacatcttcagtcagaaagtggagctgttccaaaaagaaaagatcccctaaca
catgctagtaattcactgcctcgttcaaaaactgttctgaaaactggatccacaggtctt
tctggtcaccacagagcacctagttgtagtggtttatccatggtttctggagcaagacaa
ggacctggtcctgcagctgccactcataagggtactccgaaaacaaatagaacaaataag
ccttctacccctacaactgctcctcggaaaaagaaagacttaaagaattttaggaatgtg
gacagcaaccttgctaatcttattatgaatgaaattgtggacaatggaacagctgttaaa
tttgatgatatagctggtcaagagttggcaaaacaagccttgcaagaaattgttattctt
ccttctctgagacctgagttgttcacagggcttagagctcctgccagaggattgctactc
tttggtccacctggaaatgggaagacaatgctggctaaagcagtagctgcagaatctaat
gcaaccttttttaatataagtgctgcaagtttaacttcaaaatatgtgggggaaggtgag
aaattggtgagagctctttttgcggtggctcgagaacttcagccttctataattttcata
gatgaagttgatagccttttatgtgaaagaagagaaggggagcatgatgctagtagacgt
ctaaaaactgaatttctaatagaatttgatggtgtacagtctgctggagatgacagagta
cttgtaatgggtgccactaacaggccacaagaactcgatgaggctgttctcaggcgtttc
atcaaacgggtatatgtgtctttaccaaatgaagagaccagactacttttacttaagaat
ctgttatgtaaacaaggaagcccactgacgcaaaaagaactagcacaacttgctagaatg
actgatggatactcaggaagtgatctaacagctctggcaaaagatgcagcactgggccct
atccgagaactgaaaccagaacaggtgaagaatatgtctgccagtgagatgagaaatatt
cgattgtctgacttcacggaatccttgaaaaagataaaacgcagtgtgagtcctcaaacc
ttagaagcgtacatacggtggaacaaggactttggagataccactgtttaa
DBGET
integrated database retrieval system
