Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955303
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Entry
101955303 CDS
T10664
Symbol
Atxn2
Name
(RefSeq) ataxin-2 isoform X7
KO
K23625
ataxin-2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti05014
Amyotrophic lateral sclerosis
iti05017
Spinocerebellar ataxia
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101955303 (Atxn2)
05017 Spinocerebellar ataxia
101955303 (Atxn2)
05022 Pathways of neurodegeneration - multiple diseases
101955303 (Atxn2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101955303 (Atxn2)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101955303 (Atxn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
101955303
NCBI-ProteinID:
XP_013215904
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHEKSTESSSGPKREEIM
ESILFKCSDFVVVQFKDMDSSYARRDAFTDSAISAKVNGEHKEKDLEPWDAGELSTSEEL
EALENDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLA
EEIESSAQYKARVALENDDRSEEEKYTAVQRNSSEREGHSINTRENKYIPPGQRNREVIS
WGSGRQNSPRMGQPGSGAMPSRSTSHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPS
RYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSP
KAQRHPRNHRVSAGRGSISSGLEFVSHNPPSEAATPPVARTSPAGGTWSSVVSGVPRLSP
KTHRPRSPRQNSIGNTPSGPVLASPQAGIIPAEAVAMPIPAASPTPASPASNRAVTPSME
AKDSRLQDQRQNSPSGNKENVKPNETSPNFSKAENKGISPVVSEHRKQIDDLKKFKNDFR
LQPSSTSESMDQLLNKNRDGEKSRDVIKDKIEPSAKDSFIENSSSNCTSGSSKPNSPSIS
PSILSNTEHKRGPEVTSQGVQTSSPACKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRS
FSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPLYPIP
MTPMPVNQAKTYRAVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQ
FPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMY
VSTGSLAQQYAHPNTTLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALH
LASPQQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHM
AHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHP
SVQAHHQQQL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggttcatatacttacatcagttgttggatccaaatgtgaggtgcaagtgaaa
aatggaggtatttatgaaggagtttttaaaacatacagtcctaagtgtgatttggtactt
gatgctgcacatgagaaaagtacagaatccagttcggggccaaaacgtgaagaaataatg
gagagtattttgttcaagtgttcagactttgttgtggtacagtttaaagatatggactcc
agttatgcaagaagagatgcttttactgactctgctatcagtgctaaagtgaatggtgaa
cacaaagagaaggacctggagccctgggatgcaggtgaactctcaaccagcgaggaactg
gaggctttggaaaacgatgtatctaatggatgggatcccaatgatatgtttcgatataat
gaagaaaattatggagtagtgtctacatatgatagcagtttatcttcatatacggtaccc
ttagaaagggataactcagaagaatttttaaaacgggaagcaagggcaaaccagttagca
gaagaaattgaatcaagtgctcagtacaaagctcgggtggccctggaaaatgatgataga
agcgaggaagaaaaatatacagcagttcagagaaattccagtgaacgtgaggggcacagc
ataaacactagggaaaataaatatattcctcctggacaaagaaatagagaagtcatatcc
tggggaagtgggagacagaattcaccgcgtatgggccagcctggatcgggcgccatgcca
tcaagatccacttctcacacttcagatttcaacccgaattctggttcagaccaaagagta
gttaatggaggtgttccctggccatcgccttgcccatctccttcctctcgcccaccttct
cgctaccagtcaggtcccaactctcttccacctcgggcagccacccctacacggccgccc
tccaggcccccctcgcggccatccagacccccgtctcacccctctgctcatggttctcca
gctcctgtctctactatgcctaaacgcatgtcttcagaagggcctccaaggatgtcccca
aaggcccagcgacaccctcgaaatcacagagtttctgctgggaggggctctatatctagt
ggcctagaatttgtatcccacaatccaccaagtgaagcagctactcctccagtggcaagg
actagtcctgcagggggaacatggtcatcagtggtcagtggtgttccaagattatctccc
aaaactcacagacccaggtctcccagacagaacagtattggaaatactcccagcgggcca
gtgcttgcttctccccaagctggtatcattccagctgaagctgttgccatgcccattcca
gctgcatctcctacacctgccagtcctgcatccaacagagctgtgaccccatcgatggaa
gctaaagattccaggcttcaagatcagaggcagaactctccatcagggaataaagaaaat
gttaagcccaatgaaacatcacctaacttttcaaaagctgaaaacaaaggtatatcacca
gttgtttctgaacatagaaaacaaatcgatgatttaaagaagtttaagaatgattttagg
ttacagccaagttctacttctgaatctatggatcaactactaaacaaaaatagagatgga
gaaaaatcaagagatgtgatcaaagacaaaattgaaccaagtgctaaggattctttcatt
gaaaatagcagcagcaactgcaccagtggcagcagcaagccaaacagtcccagcatctcc
ccttcaatacttagtaacactgagcacaagagaggacctgaggttacatcccaaggggtg
cagacttctagcccagcatgtaaacaagagaaggatgataaagaggagaagaaagatgca
gctgagcaagttaggaaatcaacattgaatcccaatgcaaaggagttcaaccctcgctcc
ttttctcagccaaagccttctacaaccccaacttctcctcgacctcaagcacaacctagc
ccatctatggtgggtcaccaacagccaactccagtttatactcagcctgtttgttttgca
ccaaatatgatgtatccagtcccagtgagcccaggtgtgcaacctttatacccaatacct
atgacgcccatgccagtgaatcaagccaagacatatagagcagtaccaaatatgccccaa
cagcggcaagaccagcatcatcagagcaccatgatgcacccagcctctgcagcaggtcca
cccattgtcgccaccccaccagcttactccactcagtatgttgcctatagtcctcagcag
tttccaaatcagccactagttcagcatgtgccacattatcagtctcagcatcctcatgtt
tatagtcctgtaatacagggtaacgcgagaatgatggcaccaccagcacatgcccagcct
ggtttagtatcttcttccgcaacccagtacggggctcacgagcagacacacgcgatgtac
gtttccacgggctcccttgctcagcagtatgcgcaccctaacactaccctgcacccacat
actccacatcctcagccttcagctacccccactggacagcaacaaagccaacatggtgga
agtcatcctgcacccagtcctgttcagcaccatcagcaccaggccgcccaggctctccat
ctggccagtccacagcagcagtcagccatttaccacgcggggcttgcaccaaccccacct
tccatgacacctgcctccaatacgcagtcgccacagaatagtttcccaacagcacaacag
accgtctttacaatccatccttctcacgttcagccggcatataccaatccaccccacatg
gcccatgtacctcaggctcatgtacagtcaggaatggttccttctcatccaactgcccat
gcgccaatgatgctaatgacgacacagccacccggcggtccccaggccgccctcgctcaa
agtgcactacagcccattccagtctcgacaacagcgcatttcccctatatgacgcaccct
tcagtacaagcccaccaccaacagcagttgtaa
DBGET
integrated database retrieval system
