Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955313
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Entry
101955313 CDS
T10664
Symbol
Nptx1
Name
(RefSeq) neuronal pentraxin-1
KO
K25709
neuronal pentraxin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101955313 (Nptx1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pentaxin
Laminin_G_3
Laminin_G_2
MRP-S27
Gp58
DUF6583
DUF16
DUF6626
DUF848
SlyX
Motif
Other DBs
NCBI-GeneID:
101955313
NCBI-ProteinID:
XP_005332693
UniProt:
I3N3W3
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All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MLAGRAARTCALLALCLLGSGAQDFGPTRFICTSVPVDADMCAASVAAGGAEELRSNVLQ
LRETVLQQKETILSQKETIRELTTKLGRCESQSTLDSGPGEARAGGGRKQPGSGKNTMGD
LSRTPAAETLSQLGQTLQSLKTRLENLEQYSRLNSSSQTNSLKDLLQSKIDDLERQVLSR
VNTLEEGKGGPKNDTEERVKIESALTSLHQRISELEKGQKDNRPGDKFQLTFPLRTNYMY
AKVKKSLPEMYAFTVCMWLKSSAAPGVGTPFSYAVPGQANELVLIEWGNNPMEILINDKV
AKLPFVINDGKWHHICVTWTTRDGVWEAYQDGTQGGNGENLAPYHPIKPQGVLVLGQEQD
TLGGGFDATQAFVGELAHFNIWDRKLTPGEVYNLATCSTKALSGNVIAWAESHIEIFGGA
TKWTFEACRQIN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgctggctggccgcgccgcgcgcacctgtgcgctgctcgctctttgcctcctgggcagt
ggggcccaggattttgggccgacgcgcttcatctgcacctcggtgccggtggacgccgac
atgtgcgccgcgtccgtggccgctggcggcgcggaggagctccggagcaatgtgctgcag
cttcgcgagaccgtgctgcagcagaaggagactatccttagccagaaggagaccatccgc
gaactgaccaccaagctgggccgctgcgagagtcagagcacactggactccggtcccggc
gaggccagggcgggcggcggccgcaagcagcccggctcgggcaagaacaccatgggcgac
ctgtcccggacgccggccgcggagacgcttagccaactcgggcaaactttgcagtctctc
aaaacccgcctggagaacctcgagcagtacagccgcctcaattcctccagccagaccaac
agcctcaaggatctgctgcagagcaagatcgatgacttggagcggcaggtgctatctcgg
gtgaacacgttggaggaaggaaaggggggccccaagaacgacaccgaggaaagggtcaag
atcgagagcgccctgacctccctgcaccagcggatcagcgagctggagaaaggtcaaaaa
gataaccgccctggagacaagttccagctcacattcccgctgcggaccaactacatgtac
gctaaggtgaagaagagcctgcctgagatgtacgccttcaccgtgtgcatgtggctcaag
tccagcgctgcgcccggcgtgggcacgcccttctcctatgctgtgcccggccaggccaat
gagctcgtcctcatcgagtggggcaacaaccccatggagatcctcatcaatgacaaggtg
gccaagctgccctttgtaatcaatgatggcaagtggcaccacatctgcgtcacctggacc
acccgggacggggtctgggaagcctaccaggacggcacccagggcggcaatggcgagaac
ctggcaccctaccaccccatcaagccgcagggcgtgctggtgctgggccaggagcaggac
actctgggtggcgggtttgatgccacacaagcatttgtgggtgagctggcccatttcaac
atctgggaccgcaagctgaccccaggggaagtatacaacctggccacctgcagcaccaag
gccctctctggcaatgtcatcgcctgggcagagtcccacattgagatctttggcggagcc
accaagtggacattcgaggcctgtcgccagatcaactga
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