Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955419
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Entry
101955419 CDS
T10664
Symbol
Tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X2
KO
K16573
gamma-tubulin complex component 6
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101955419 (Tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101955419 (Tubgcp6)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
101955419 (Tubgcp6)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
101955419 (Tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
101955419
NCBI-ProteinID:
XP_021588719
LinkDB
All DBs
Position
Unknown
AA seq
1655 aa
AA seq
DB search
MAGITQLFDDLCEALLPAAPARPRQRGVARSRAKQTLKRVAYNALFTSLFQEETQQPQPD
LPKLPVRNKVLMLSFDLRVGGLGPEADRLEELVEGLEADPCCPLVELGSALDLLVQLAGS
GPPRTLRRKRDYFCHNRHAGRNVPYGGYDCCDLRLLEMDVQSLIASEEYSCHSMVQETLQ
VMEAAPGTGLPTVGLFSFGDPCGDRFERETRISIFGALVHSRTYDMDVRLDLPPVPDSAD
LSGLAIKVPQSVDQWEDEGFQSASNLTPDSQSEPSMTPDVDLWEAALTYEPSKRRCWERV
GCPPGHREEPYLTEAGRDAFDRFCRLRQGELQALSGGLLQAPRPLLVKEQELVKDSLNVL
LGVVSATFSLCQLSQAFVVERGVHVSGASPESISSILSEVAEYGTCYTRLSHFSVQPVLG
SSCSRGLVFQAFTSGLRRYLQYYRACVLATPPTLSLLTIGFLFKKLGRQLRYLAELCGVG
TVLPGSSGGEPRDAFPTGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIHDWV
YSGVFRDVYGEFMIQVNHEYLGFRDKFYWTHGYVLISKEVEDCVPVFLKHIAHDVYVCGK
TINLLKLCCPRHYLCWSDVPVPRISVIFSLEELKEIEKDCAVYVGRMERVARHSSISKEE
KELRMEIAKQELIVHAREAASRVLSELSDRQMSEQMALDARKREQFQRLKEQFVKDQERR
LAARQEELEDDFSYAREVRDREKRLTALEEELDRKARQALVDHYSKLSAEAARREQRALW
RIQRHRLESARLRFFLEDEKRVQEMLKNVAEVCQPQELLGHLPGTCSQVNALLQVTSPGP
EHPDRGPTCNSAPTELHLAAWDCPGRPSVPATQAIESPAVGAGGSGTRLAEGAEPFSAGL
SITDFLPLGPSAEQPVQTNRALPLEEALQTISSDLPAVSPGEAHATAGTQPAQPQEYDFS
TVLRPAAATSPSPGPLQAVEGSLGPEEHAPWEGTHEGTQMALSPPLRHVTSEEGSNQPTG
QLHRHVSDASIRVGENMPDVAPSRPRWNVHGHVSDASIRVGENMPDVAPSRPRWNVHGHV
SDASIRVGENMLEAEPIPPWPHQNPPSHESQAGSSLEVQNPALEHGPRLPVDTEPSICCP
KVGSLQNLPSVASKSSTLGDSVSEEPGAGKNGDNDDLSPSWPPNSQVGRTQPGEGSMQGA
PHALFQHKPKGAWEQLLGGVPTLSLDSQEGTAAPSSPEAAAEVEALRWGKEQAYVAGLAS
RYHLEQYPDSYESMSEAPAAHLVRHVLPRAFAFPVDPWVQSAVDETTVQLTELLTLPVLM
QRSLTAPLAAHVSLVNKAAVDYFFAELHLEAHFEALRHFLLMEDGEFAQSLSDLLFEKLG
AGQTPGELLNPLVLNCILSKALQYSLHGDTPHATNLSFALKYLPEVFAPNAPDVLSCLEL
RYKVDWPLNIVITENCLSKYSGIFSFLLQLKLMMWTLKDICFHLKRTALVSHTAGSVQFR
QLQLFKHEMQHFVKVTQGYIANQILHVSWCEFRARLATVGNLEEIQRAHAEYLHKAVFRG
LLTEKAAPVMNIIHSIFSLVLKFRSQLISQAWGPASGPQGAEHPNFALMQQSYSTFKYYS
HFLFKVVTKLVNRGYQPHLEDFLLRINFNSYYQDA
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggccggcatcacccagctgttcgatgacctgtgcgaggccctcctgccagcggccccg
gctcgcccgcgccagcgcggcgtggcccggagccgggcgaagcagaccctcaagcgggtg
gcctacaatgcccttttcacgagcctgttccaagaggagactcagcagccgcagcccgac
ctcccgaagctccccgtgagaaacaaggtcctcatgttgtccttcgacctgagagtgggc
ggcctgggccccgaggctgaccgactggaggagctggtggaggggctggaggcagacccg
tgctgtccactcgtggagctgggctctgcgctggacctcctcgtccagctggcagggagc
ggcccgccacgcaccctgcggagaaaacgggactacttctgccacaacaggcacgcgggc
cggaacgtcccctacggcggctacgactgctgcgacctgcggcttttggagatggacgtc
cagtccctgatcgccagcgaggagtactcctgtcacagcatggtccaggaaacgcttcaa
gtgatggaggctgctccaggcactggcctgcccaccgtagggctcttctccttcggtgac
ccttgtggtgacaggtttgagagagaaacccgcatctccatcttcggtgctcttgtgcac
agtcgcacttatgacatggatgtgcgactagacttgccccctgtgcctgatagtgcagac
ctctctggactggccattaaggtccctcagagtgtggatcagtgggaagacgaagggttc
cagtcagcatccaatttgactcctgattctcagtctgaaccaagcatgactccagatgtg
gacttgtgggaagctgccctcacgtatgagcccagcaagcggaggtgctgggagcgagtg
ggatgcccccctggccacagagaggagccctacctcactgaggcgggaagggacgccttt
gacaggttctgcaggctccgccaaggtgagcttcaggcgctcagtgggggcctcctgcag
gccccaaggcccctgctggtgaaggaacaagagctggtgaaggactcgctgaacgtcctg
cttggggtggtgtccgccacgttctccctctgccagctctctcaggcctttgttgtggag
cggggtgtccacgtgtcaggggcttctcccgagagcatcagcagtatcctgtcagaggtg
gctgagtatgggacctgctatacacgcctgagccacttctccgtgcagcccgtgctgggc
tcctcctgcagcaggggccttgtgtttcaggccttcaccagcggcttgaggcggtacctg
cagtactaccgggcctgcgtcctcgccaccccgcccacactcagcctcctcaccattggc
tttctctttaagaagttgggccggcagctcaggtacctggctgagctttgtggtgttggc
actgtgctccctgggtccagcggaggagagcccagggatgcattccctaccggggtgaag
ctgctgtcctacctctaccaggaagccctggacaactgcagcaatgagcactaccctgtg
ctgctgtccctgctgaagacaagctgtgagccctatacacggttcattcatgactgggtg
tacagcggggtcttcagagacgtgtatggggagttcatgatccaggtgaaccacgagtac
cttggcttcagagacaagttttactggacccatggctatgtgctcatctccaaagaggtg
gaggactgtgtgcctgtgttcctgaagcacattgcccacgacgtgtacgtctgtgggaag
accatcaacctgctgaagctctgctgtccccggcactacctctgttggtcagatgtccct
gtgcctcgcatttcggtgattttctccctggaggagttgaaggagatagagaaggactgt
gccgtctacgttgggcggatggagagggttgcccgccacagctccatcagcaaggaggag
aaggaactacgtatggaaattgcaaaacaagaattaattgtccatgcccgggaagcagcc
tccagggtcctgagtgagctgagcgaccggcagatgtccgagcagatggccttagatgcc
cggaagcgagagcaatttcagcgtctaaaggagcaatttgtgaaggaccaggagcgacgc
ctggcggcccgacaggaagaactggaagatgacttcagctatgctcgtgaggtccgggac
cgagagaagcggctgacagccctggaggaagagctggacaggaaggccaggcaggcactg
gtggaccactatagcaagttgtctgcagaggcagctcgtcgggagcagagggcactgtgg
agaatccagaggcaccgattggaaagtgcacggcttcgttttttcctagaagatgaaaag
cgtgtccaggagatgctgaagaacgtggctgaggtttgccagccccaggagctgctgggt
cacctcccaggtacctgctcccaggtcaatgccctgttgcaggtcacatctccaggcccc
gagcacccagacagaggtcctacctgtaattcagcacccacagagctgcacttggctgcc
tgggattgtccaggcaggccgagtgtgcccgctacgcaggccattgagtctccagcagtt
ggggctggtggctcagggaccagactggcagagggggctgagccgttctctgctggcctc
agcatcacagacttcctgcccttgggtcccagcgctgagcagcctgtgcagaccaacagg
gcccttcccctggaggaggcgctgcagaccatcagctcagacctgcctgccgtttcccct
ggggaggcccatgccacagctggcacacagcctgcccagccacaggagtacgacttcagc
accgtcctgaggccagctgcggccacctcaccttccccaggtccccttcaggctgttgag
ggcagcttgggccctgaggagcacgcgccatgggagggcacgcacgagggcacacagatg
gctctgtcccccccactcaggcatgtcacctctgaggagggaagcaaccagcccacaggg
cagctccataggcacgtgtcagatgccagcatcagggttggcgagaacatgccagatgtg
gctccctctcggccacggtggaacgtccacgggcacgtgtcggatgccagcatcagagtc
ggggagaacatgccagacgtggctccctcccggccgcggtggaacgtccacgggcacgtg
tcagatgccagcatcagggtgggggagaacatgctagaagctgagcccatcccaccctgg
ccccaccagaaccctcctagccacgagtcccaggcaggctcaagcctggaagtacagaac
cctgccctggaacatgggccacggctacctgtagacacggagccttccatctgctgtccc
aaagtgggcagcctgcagaacttgccctctgttgcgtccaagtccagcactttgggagac
agtgtctctgaggagccaggtgcagggaagaatggtgacaatgatgacctctctccaagc
tggcctccaaactctcaggttggaaggacacagcctggggaggggagcatgcagggagcc
ccacatgcccttttccaacacaaacccaagggggcctgggagcagctgctgggcggggtg
cccaccttgagtttggattctcaggaaggcacagctgccccgagcagccctgaggcagca
gctgaggtggaggcgctgcgctggggcaaggagcaggcctatgtggcaggcctggccagt
cggtaccacctggagcagtacccggacagctacgagtccatgtcagaggcccccgctgcc
cacctggtacgccacgtgcttccccgggccttcgccttccccgtggacccctgggtgcag
tcggctgtggacgagaccacggtgcagttgaccgagctgctgacgctgccggtgctcatg
cagcgctcccttactgccccgctggctgcccacgtctccctggtgaacaaagctgcagtt
gactacttctttgcggagctgcacctggaggcgcactttgaggctttgcggcacttcctg
ctgatggaggatggggagtttgcccagtccctgagtgacctgctctttgagaagctcggg
gctgggcagacacctggggaactgctcaacccactggtcctcaactgcatcctgagcaag
gccctccagtacagcctccatggggacaccccacatgccaccaacctctccttcgccctc
aagtacctgcctgaagtgtttgctcccaatgccccggatgtgctgagctgcctggagctc
aggtacaaggtcgactggcccctcaacatcgtcatcaccgagaactgcctgagcaagtac
agcggcatcttctccttcctgctgcagctgaagctcatgatgtggacgctcaaggacatc
tgcttccacctcaagcgcacagccctggtgagccacacagctggctcagtgcagttccgc
cagctgcagctgttcaaacacgagatgcagcactttgtgaaggtcacccagggctacatc
gccaaccagatcctgcatgtcagctggtgtgagttcagggcccggctggccacagtgggc
aaccttgaggagatccagcgcgcccatgcagagtatctgcacaaggctgtcttcaggggc
ctgctcactgagaaggcagcaccggtcatgaacatcatccatagcattttcagcctggtg
ctgaagttccgcagccagctcatctcccaggcctggggcccagccagtggcccccagggt
gctgagcaccccaactttgctctcatgcagcagtcctacagtaccttcaagtactactcc
cacttcctcttcaaagtggtgaccaagttggtgaaccgtggttaccagccccacctcgag
gacttcttgctgcgcatcaacttcaacagctactaccaggacgcctga
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integrated database retrieval system
