Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955428
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Entry
101955428 CDS
T10664
Symbol
Exosc4
Name
(RefSeq) exosome complex component RRP41 isoform X2
KO
K11600
exosome complex component RRP41
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101955428 (Exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101955428 (Exosc4)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101955428 (Exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
101955428 (Exosc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101955428
NCBI-ProteinID:
XP_005316111
LinkDB
All DBs
Position
Unknown
AA seq
245 aa
AA seq
DB search
MAGLELLSDQGYRVDGRRARELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRSRALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQ
IDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVEGTALADLSHVEEAA
GGPQLALALLPASGQIALLEMDARLHEDHLEQVLEAAAQAARDVHTLLDHVVRQHVREAS
ILLGD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggagctcctgtctgaccagggttaccgggtggacggtcgtcgcgccagg
gagctgcgcaagatccaggcgcgcatgggcgtgttcgcgcaggccgacggctcggcctac
atcgagcagggcaacaccaaggcgctggcagtggtctacgggccgcacgagatccggggt
tccaggtctcgagccctgcctgaccgggctctggtgaactgtcaatatagttcagcaacc
ttcagcacaggtgagcgcaagcggaggccacatggagaccgtaagtcctgtgaaatgggc
ctacagctgcgccagacctttgaggcagccattcttactcagctgcacccacgatcccag
attgacatctatgtgcaggtgctgcaggctgatggtggaacctacgcagcttgtgtgaat
gccgccacgctggcagtgttggatgctgggatacccatgcgggactttgtgtgtgcatgt
tcagctggttttgtggaaggcacagccctggcagacctcagccatgtggaggaagcagct
ggtggtccccaactagccctggccctgctgccagcctcaggccagatcgcgctgcttgaa
atggatgcccggctgcatgaggaccacttggagcaggtgcttgaggccgccgcccaagca
gctagagatgtgcacaccttgttggaccatgtggtacggcagcatgtgcgtgaggcatct
atcttgctgggggactga
DBGET
integrated database retrieval system
