Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955511
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Entry
101955511 CDS
T10664
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04064
NF-kappa B signaling pathway
iti04622
RIG-I-like receptor signaling pathway
iti05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101955511
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101955511
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101955511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101955511
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101955511
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101955511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
PRY
zf-Tbcl_FmdE
zf-Nse
Motif
Other DBs
NCBI-GeneID:
101955511
NCBI-ProteinID:
XP_040124408
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MGMERGAHAECPRSFPSQHRAATDMALPDMQQVSRPAQDQVPAPQLPALPSRPSQGQLLL
NNTSALRTFEDQVLCPICLEVFHNPVTTACGHNFCMTCLQSFWDHQAATGETHYCPQCRE
SFPSRPRLCKNVILGEMVACFTQGKNQATGPLWNTAGPRDVPCDFCSPQKLRSVKSCLHC
VASLCEKHLRSHFEDQMFQSHQLLEPVQDLKTRLCRKHRKLRQLYCRTEGCCVCGACLLE
EHKNHETAPLEEERARKEMEVRKVQANVENEMLIIASDSQKHQGRVTFLSKLIQTMRDEV
NTCFSEIIHEVKQLQIKVLDFVEKEEATALGKLGSSIQQSHNRLLKLEGDSVWLHTLLTN
RSDEQFLQEFPKLKHIPVSSEPLMGTNCEETQSFLQLPETLAELRTQLVDMGLRFVNQLL
MKGIRMNSYEVLPLTMDRKTLLQCYCNLNFDPSTASEELFLFKETHSVLNLGILLEPSAT
GGPVPGFKQWPQVLCSRGLSEGRYYWEAEVSNSWMCLGVTYRRSPQLNGVPRRNIVYLLG
RNPYSWCLEWDSLKFSVWHNNTQTVLHGAYHRTLGVALDCAAGCLSFYGVAGGVSLLYRF
LATFLEPLFPAVMVSSGASVTLKQRPDA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggggatggagcgaggcgcccacgccgagtgcccaaggtccttcccttctcaacacagg
gcagcaacggatatggctctccctgacatgcagcaagtttcacggccagcccaggaccaa
gtcccagccccacagctccccgccttgccctcaagaccttcccaaggccagctcctgctg
aataacacctccgctctccgcacattcgaggaccaagtcctgtgtcccatttgcttggag
gtgttccataatccggtcaccaccgcctgtggccacaacttctgcatgacctgtctccaa
agtttctgggaccaccaggctgccacgggggagacccactattgcccccagtgcagagag
agcttcccctccaggccccggctctgcaagaacgtcatcctaggggagatggtggcctgc
ttcacccagggtaagaaccaggccacggggcccttgtggaacacagctgggcccagggac
gtgccctgtgacttctgctccccccagaagctccggtctgtcaaatcgtgcctgcactgt
gtggcctctctgtgtgagaagcacctgcgcagccactttgaggaccagatgttccagagc
caccagctgctggagcctgtgcaggatctcaagacccgcttgtgtcgcaagcaccgcaag
ctccggcagctgtactgtcgcacggaaggctgctgcgtgtgtggcgcctgcctactagag
gaacacaagaaccacgaaacggccccactggaggaggagcgagcccgcaaggagatggag
gttcggaaagtccaggccaacgtggagaatgagatgctaatcattgcctccgacagccag
aagcaccaggggcgagtgacctttctctcgaaactcatccagacgatgcgggatgaggtg
aacacctgcttctctgagatcatccacgaggtcaaacagctgcagataaaggtcttggat
ttcgtggagaaagaggaggcaactgccctggggaagctgggcagctccatccagcagagc
cacaaccggcttctgaagctagagggggacagtgtctggctccacaccctgctcaccaac
agaagtgatgagcaattcctgcaggagttccccaaattgaagcatatcccagtctcctcg
gaacccctgatgggcaccaactgtgaggagacacagagcttcctccagctgccagagacc
ctggctgagctcaggacccagctggtggacatgggtctccgcttcgtcaaccagctcctg
atgaagggcattaggatgaactcctacgaggtgctgccactaaccatggacaggaaaaca
ctcctccaatgttactgcaacctgaacttcgacccctccaccgccagcgaggagctgttc
ctgttcaaggagacccactcggtgctgaacctgggcatcctcctggagccctcggccacg
ggcggcccggtcccgggcttcaagcagtggccgcaggtgctgtgctcccgcggcctgtcc
gagggccgctactactgggaggcggaggtgtccaactcgtggatgtgcctgggcgtcacc
taccgccgcagcccgcagctcaacggcgtcccgcgccgcaacatcgtctacctgctgggc
cgcaacccctactcgtggtgcctcgagtgggactcgctcaagttctccgtgtggcacaac
aacacgcagacggtgctgcacggcgcctaccaccgcacgctgggcgtggcgctcgactgc
gccgccggctgcctctccttctacggcgtggcgggcggcgtgagcctgctctaccgcttc
ctcgccaccttcctcgagccgctcttccccgcggtcatggtcagcagcggcgcctcggtc
acgctcaagcagcgccccgacgcgtag
DBGET
integrated database retrieval system
