Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955555
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Entry
101955555 CDS
T10664
Symbol
Actn4
Name
(RefSeq) alpha-actinin-4 isoform X3
KO
K05699
actinin alpha 1/4
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04510
Focal adhesion
iti04520
Adherens junction
iti04530
Tight junction
iti04670
Leukocyte transendothelial migration
iti04810
Regulation of actin cytoskeleton
iti05146
Amoebiasis
iti05203
Viral carcinogenesis
iti05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101955555 (Actn4)
04520 Adherens junction
101955555 (Actn4)
04530 Tight junction
101955555 (Actn4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101955555 (Actn4)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101955555 (Actn4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101955555 (Actn4)
09174 Infectious disease: parasitic
05146 Amoebiasis
101955555 (Actn4)
09163 Immune disease
05322 Systemic lupus erythematosus
101955555 (Actn4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101955555 (Actn4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101955555 (Actn4)
04147 Exosome [BR:
iti04147
]
101955555 (Actn4)
Membrane trafficking [BR:
iti04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101955555 (Actn4)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101955555 (Actn4)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101955555 (Actn4)
Exosomal proteins of colorectal cancer cells
101955555 (Actn4)
Exosomal proteins of bladder cancer cells
101955555 (Actn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
XisI
Motif
Other DBs
NCBI-GeneID:
101955555
NCBI-ProteinID:
XP_005340560
UniProt:
I3MZF4
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MVDYHAANQSYQYGPSSGGNGAGGGGGMGDYMAQEDDWDRDLLLDPAWEKQQRKTFTAWC
NSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIA
SKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPY
KNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPVTNLNNAFEVAEKYLDIPKM
LDAEDIVNTARPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYER
LASDLLEWIRRTIPWLEDRVPQKTIQEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTL
QTKLRLSNRPAFMPSEGRMVSDINNGWQHLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQ
KASIHEAWTDGKEAMLKHRDYETATLSDIKALIRKHEAFESDLAAHQDRVEQIAAIAQEL
NELDYYDSHNVNTRCQKICDQWDALGSLTHSRREALEKTEKQLETIDQLHLEYAKRAAPF
NNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAES
NHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDRALLEEQSKQQSNEHLRRQFSSQANV
VGPWIQTKMEEIGRISIEMNGTLEDQLSHLKQYERSIVDYKPNLDLLEQQHQLIQEALIF
DNKHTNYTMEHVRVGWEQLLTTIARTINEVENQILTRDAKGISQEQMQEFRASFNHFDKD
HGGALGPEEFKACLISLGYDVENDRQGDAEFNRIMSVVDPNHSGLVTFQAFIDFMSRETT
DTDTADQVIASFKVLAGDKNFITAEELRRELPPDQAEYCIARMAPYQGPDAVPGALDYKS
FSTALYGESDL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggtggactaccacgcggcgaaccagtcgtaccagtacggccccagcagcgggggcaat
ggtgctggcggcgggggtggcatgggcgactacatggcccaggaggacgactgggaccga
gacctgctgttggacccggcctgggagaaacagcagcgcaagaccttcacagcctggtgt
aactcccacctgcggaaggcgggcacgcagatcgagaacatcgatgaggacttccgcgac
gggctcaagctcatgctgctcctggaggtcatttcaggggagcggctgcctaagcccgag
cgtgggaagatgcgggtgcacaagatcaacaacgtgaacaaagccctggacttcatcgcc
agcaaaggggtcaagctggtctccattggagcggaagagatcgtagacggcaacgccaag
atgactctgggcatgatctggaccatcatcctcaggttcgccatccaggacatctccgtg
gaagagacctctgccaaggaagggctcctcctctggtgccagagaaagacggcaccatat
aagaacgtcaacgtgcagaacttccacatcagctggaaggacggccttgccttcaacgcc
ctgatccaccggcaccggccagagctgattgagtacgacaagctgagaaaggacgatcca
gtcaccaacctgaacaatgccttcgaagtggctgagaaatacctcgatatccccaagatg
ctggatgcagaggacatcgtgaacacggcccggcccgacgagaaggccataatgacctat
gtgtccagcttctaccatgccttctcaggagcgcagaaggccgagactgcggccaaccgc
atctgcaaggtgctcgccgtcaaccaggagaacgagcacctgatggaggactacgagcgg
ctggccagcgacctcctggagtggatccggcgcaccattccctggctagaggaccgcgtg
ccccagaagaccatccaggagatgcagcagaagctggaggatttccgcgactaccggcgc
gtgcacaagccgcccaaggtgcaggagaagtgccagctagagatcaacttcaacacgctg
cagaccaagctgcgcctcagcaaccggccggccttcatgccctctgagggcaggatggtc
tcggacatcaacaatggctggcagcacctggagcaggcggagaagggctatgaggagtgg
ctgctgaatgagatccgcaggctggagcggctcgaccacctggcggagaagttccggcaa
aaggcctccatccacgaggcctggactgacgggaaggaggccatgctgaaacaccgggac
tatgagacagccaccctgtcagacatcaaagccctcatccgcaagcacgaggccttcgag
agtgacctggccgcacaccaggaccgcgtggaacagattgcagcgattgcccaggaactc
aacgagctggattactatgattcccacaatgtcaacactcggtgtcagaagatttgtgac
cagtgggacgccctaggctctctgacccacagccgcagggaagccctggagaaaacagag
aagcagctggagaccattgaccagctgcacctggagtacgccaagcgggccgcgcccttc
aacaactggatggagagcgccatggaggacctgcaggacatgttcatcgttcacaccatc
gaggagatcgagggcctgatctcagcccacgaccagttcaagtccaccctccccgacgcc
gacagggagcgggaggccatcctggccatccacaaggaggcccagaggatcgcagagagc
aaccacatcaagctgtctggcagcaacccctacaccaccgtcaccccccagatcatcaac
tccaagtgggagaaggtgcaacagctggtgccaaagagggaccgtgcacttctggaagag
cagagcaagcagcagtctaacgagcacctccgccgccagttctcgagccaggccaacgtg
gtggggccctggatccagaccaagatggaggagatcggacgcatctccattgagatgaac
gggaccctggaggaccagctgagccacctgaagcagtacgagcgcagcatcgtggactat
aagcccaacctggacctgctggagcagcaacaccagctcatccaggaggccctcatcttc
gacaacaagcacaccaactacaccatggagcacgtgcgcgtgggctgggagcagctgctc
accaccatcgcccgcactatcaacgaggtggagaaccagatcctcacccgggatgccaag
ggcatcagccaggagcagatgcaagaattccgggcgtccttcaaccacttcgacaaggac
catggcggggcgctggggcccgaggagttcaaggcctgcctcatcagcctgggctacgac
gtggagaacgaccggcagggcgacgctgagttcaaccgcatcatgagcgtggtcgacccc
aaccacagcggccttgtgaccttccaagccttcattgacttcatgtcaagggagaccact
gacacagataccgctgaccaggtcatcgcctccttcaaggtcctggccggggacaagaac
ttcatcacggccgaggagctgcggagggagctgccccccgaccaggccgagtactgcatc
gcccggatggcgccctaccagggccccgacgccgtgcccggggccctcgactacaagtcc
ttctccacggccctctacggggagagtgacctgtga
DBGET
integrated database retrieval system
