Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955600
Help
Entry
101955600 CDS
T10664
Symbol
Atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04136
Autophagy - other
iti04140
Autophagy - animal
iti04211
Longevity regulating pathway
iti05010
Alzheimer disease
iti05014
Amyotrophic lateral sclerosis
iti05016
Huntington disease
iti05017
Spinocerebellar ataxia
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101955600 (Atg13)
04136 Autophagy - other
101955600 (Atg13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
101955600 (Atg13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101955600 (Atg13)
05014 Amyotrophic lateral sclerosis
101955600 (Atg13)
05016 Huntington disease
101955600 (Atg13)
05017 Spinocerebellar ataxia
101955600 (Atg13)
05022 Pathways of neurodegeneration - multiple diseases
101955600 (Atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101955600 (Atg13)
03029 Mitochondrial biogenesis [BR:
iti03029
]
101955600 (Atg13)
Membrane trafficking [BR:
iti04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101955600 (Atg13)
Atg1 complex
101955600 (Atg13)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101955600 (Atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101955600
NCBI-ProteinID:
XP_005330057
UniProt:
A0A287CW16
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYSSSSPMHPCNYRTAGEDAGV
TYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFSHQLSSS
RLSYQPAVLGLGSADLAYPVVFAAGLNAQHPHQLMVPGKEGGVPLAPNQPVHGAQADQEK
LAIHTPADVAHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDTDPMVNPPESPEPVSPLHGSLHSDGSSGGSSGNAHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagttcattaaatttttt
gccctcaagacagttcaagtgattgtccaggcgcgacttggtgaaaagatttgcactcgt
tcatcttcttctccaacgggttcagattggttcaatttagcaatcaaagacatcccggag
gttacacatgaggccaagaaggcattggcagggcagctgcccgctgtggggcggtccatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctggaaatttggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcctacacagtgtacaacagg
ctgtcactgctgctgaagtcccttcttgctataactagggtgacacctgcttacagactc
tcccgaaaacaagggcatgagtatgtcatattgtacaggatatattttggggaagttcaa
ctgaatggcttaggagaaggcttccagactgttcgtgttgggacagtgggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtccaccaggcaa
tttgagaggaccccacctatcatggggattatcattgatcactttgtggaccgtccctat
tccagctcctctcccatgcacccctgcaattacagaactgctggggaggatgctggagtg
acatacccatcagtggaagactctcaagaagtgtgtacaacctctttttccacctctcct
ccatcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacactctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgtcctgggccttggatcagctgacctggcttatccagta
gtgtttgctgctggcttaaatgctcaacaccctcaccagctaatggttcctgggaaggaa
ggtggggtgccccttgctcccaaccagccagtccatggtgcccaggctgaccaagagaaa
ctggcgatccacactcccgcagatgtggcccactgtgctgccacaccttccagcagtgag
gatactgaaaccgtgtccaatagcagcgagggacgggcctctccccacgatgtcctagag
accatctttgtccggaaagtgggggcttttgtcaacaaacccatcaaccaggtgactctg
acaagtctggacataccctttgccatgtttgctcccaagaatttggagctggaggatact
gatcctatggtgaatcctccagagtccccagagcctgtgtctcctctccatggcagcctg
cactcggatggctccagcgggggcagcagtggcaatgcccacgatgacttcgttatgatt
gacttcaaaccagctttttctaaagatgacattcttccgatggacttggggaccttctat
cgtgaatttcagaacccccctcagctgagcagcctctccatagatatcggggcacaatcc
atggctgaagacttggactcgttaccagagaagctggctgttcatgagaagaacgtgcga
gaatttgatgcctttgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
