Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955657
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Entry
101955657 CDS
T10664
Symbol
Cntnap1
Name
(RefSeq) contactin-associated protein 1
KO
K07379
contactin associated protein 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101955657 (Cntnap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101955657 (Cntnap1)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
101955657 (Cntnap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
EGF
Laminin_G_3
F5_F8_type_C_2
Ntox6
Motif
Other DBs
NCBI-GeneID:
101955657
NCBI-ProteinID:
XP_021579817
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MRLQLFCILLATAVSGTRGWGYYGCDEELVGPLYARSLGASSYYGLFTTARFARLHGISG
WSPRIGDPNPWLQIDLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQQGHN
AVRQMCTLGEPPLFWGLGGALAWNPRGKIGLRLGLYGCPYKSDILYFDGDDAISYRFPRG
VSRSLWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELQGAHLLLHMSLGSSPIQPRPGHT
TVSAGGVLNDQHWHYVRVDRYGREANLTLDGYVQRFVLNGDFERLNLDTEMFIGGLVGAA
QKNLAYRHNFRGCMENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHN
FVQVPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELMLSEGQVNVSIAQTGRKK
LQFAAGYHLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSSPLLIRTGTSYFFGGCPKP
ASRWGCHSNQTAFHGCMELLKVDGQLVNLTLVEFRRLGYFAEVLFDTCGITDRCSPNMCE
HDGRCYQSWDDFICYCELTGYKGETCHQPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKP
FVVYCDIRENRAWTVVRHDRLWTTRVTGSSMERPFLGAVQYWNASWEEVSALANASQHCE
QWIEFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALHC
NCDADQPQWRTDKGLLTFVDHLPVTQVVVGDTNRSSSEAQFFLRPLRCYGDRNSWNTISF
HTGAALRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGRYCQWRRPYVRVELNTSRDVVF
AFDVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVVRPMPLQTYIWLE
YDQPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRFPCFH
GGRCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSR
PVPGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFST
DSAPAVLLYVSSFVRDYMAVLIKEDGTLQLRYQLGTSPYVYQLTTRPVTDGQPHSVNITR
VYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCL
SGVRFNNVAPLKTHFRAPRPMTAELAEALRVQGELSESNCGAMPRLVSEVPPELDPWYLP
PDFPYYHDDGWVAILLGFLVAFLLLGLVGMLVLFYLQNHRYKGSYHTNEPKATHDYHSGS
KPPLPTSGPAQAPTPTPAPTQVPAPAPAPAPAPASGPGPRDQNLPQILEESRSE
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctccagctcttctgcattttgctagccaccgcggtctctggaactcggggctgg
ggctactatggctgcgatgaagagctggtgggtcccttgtatgcacgctccctgggtgcc
tcctcctactatgggctcttcaccacagcccgctttgccaggttgcatggcatcagtgga
tggtcaccccggattggggatccaaatccctggctccagatagatttaatgaagaagcac
cggatccgagctgtggccacacaaggctcctttaattcttgggactgggtcacacgttac
atgctactctatggcgaccgtgtagacagctggactccgttctaccagcaaggacacaac
gcagtacgccagatgtgcacacttggggagcctcctctattctggggcctgggtggggca
ctagcctggaacccgcgaggcaagatcggcctgcgactcggtctctatggctgcccctac
aagtcagacatactctacttcgacggcgacgatgccatctcctaccgcttcccaagagga
gtcagccgaagtctgtgggacgtatttgctttcagtttcaagacggaggagaaagatggg
ctactactgcacgctgagggcgcccagggcgactacgtgacgcttgagctgcagggggcg
cacctgctactgcacatgagcctgggcagcagccccatccagccaaggcctggtcacacc
acggtgagcgctggcggtgtcctgaacgaccagcactggcactatgtgcgagtggatcga
tatgggcgagaagcaaatctcaccctagatggctatgtacagcgcttcgtgctcaatggt
gactttgagaggctgaatctggacacagagatgttcattgggggtctggtgggtgccgcg
cagaagaatctagcgtatcggcataacttccgtggctgcatggaaaacgtcatcttcaac
cgggtcaacatcgcagacttggccgttcggcgtcattcccggatcactttcgagggtaag
gtggcattccgttgcctggatccagttccgcaccccattaactttggaggtcctcacaac
tttgtccaagtgccaggtttcccgcgccgaggccgccttgcagtctccttccgcttccgc
acctgggacctcacagggctgctgcttttctcccgcctgggcgacggactgggccatgtg
gagctgatgcttagcgaagggcaggtcaacgtgtccattgcacagaccggccgcaagaaa
cttcagtttgctgctggatatcacctaaatgatggcttctggcacgaggtgaattttgtg
gcacaggaaaaccatgcagtcatcagtattgatgatgtggagggggcagaggtcagagtc
tcatcccccctgctgatccgtacagggacttcgtacttctttggaggttgtcccaaacca
gccagtcgatggggctgccactccaaccagacggcattccatggctgcatggagctgctg
aaggtggatggtcaactggtcaacctgactctggtggagtttcggcggcttggatatttt
gctgaggtcctctttgacacatgtggcatcaccgataggtgtagccctaacatgtgtgaa
catgatggacgctgctaccagtcttgggatgacttcatatgctactgtgaactgactggc
tacaaaggggagacctgtcaccaaccattgtataaggaatcctgtgaggcttatcgactc
agtggaaaaacttctggaaacttcaccattgatcctgatggcagtggccccctgaagcct
tttgtagtgtactgtgatatccgagagaaccgagcatggacagttgtgcgacatgacagg
ctgtggacaactcgggtaacaggttccagcatggagcggcccttcctaggggctgtccag
tactggaatgcatcatgggaggaagtcagcgctctagccaacgcttcccagcactgtgag
cagtggatcgagttctcctgctataattcccggctgctcaacactgcaggaggctacccc
tacagcttttggattggccgaaatgaggagcagcacttctactggggaggctcgcagcct
gggatccagcgctgtgcctgtggattggaccggagctgtgtggaccctgccctgcactgc
aattgtgatgctgaccagccccagtggagaactgacaaggggctgctgacttttgtggac
catctgcctgtcactcaggtggtggtgggggatacgaaccgctccagttcagaggcccag
ttcttcctgaggcctctgcgttgctatggcgaccgaaactcctggaacaccatttccttc
cacacgggggctgcactacgcttccccccaatccgtgccaaccacagtctcgacgtctcc
ttctacttcaggacctcggctccctcaggagttttcctagagaatatggggggccgttat
tgccagtggcgtcgaccttacgtgcgggtggaactcaacacatcccgggatgtggtcttc
gcctttgatgtggggaatggggatgagaacttgacggtacactcggatgactttgagttt
aatgatgatgaatggcacctggtccgggctgaaatcaacgtgaagcaggcccggcttcga
gtggatcaccggccctgggtggtgcggcccatgccactgcagacctacatctggctggag
tatgaccagcccctctatgttggatctgcggaacttaagaggcgcccctttgtgggctgc
ttgagggccatgcgtctgaatggagtgactctgaacctggagggccgtgctaatgcctct
gagggtacttctcccaactgcacaggccactgcgcccaccctcggttcccctgtttccat
ggaggccgctgtgtggagcgctacagctattacacatgtgactgtgacctcacagctttt
gatgggccatattgcaaccacgacatcggcggtttctttgagccaggcacctggatgcgc
tataacctacagtcagctctgcgctctgcagcccgggaattttcccacatgctgagccgg
ccagtgccaggctatgagcctggctatatccctggttatgacactcccggttatgtgccc
ggctaccatggccctgggtaccgcctgcctgactaccccaggcctggccggcctgtgcca
ggttaccgggggcctgtctacaacgtcacaggggaggaggtctccttcagcttcagcact
gactctgcccctgcagtcctgctttacgtcagctcctttgtgcgtgactacatggctgtg
ctcatcaaggaagatgggaccctgcagctgagatatcaactgggcactagtccctatgtt
taccagctaaccacccggccagttactgatggccagccccacagtgtcaatattacccgg
gtctaccgcaacctcttcatccaggtggactacttcccgctgacagaacagaagttctct
ctgctggtagacagccagctggactcgcctaaagccttgtatctaggacgtgtgatggag
acgggtgtaattgacccagagatccagcgttacaacaccccaggtttctcaggctgcctg
tctggtgttcgattcaacaatgtggctccactcaagacccatttccgagctcctcggccc
atgaccgctgagctagcagaggcccttcgagttcagggagaactgtccgaatctaactgt
ggagctatgccacgccttgtctcagaggtgccacctgagcttgatccctggtatctgccc
ccagacttcccgtactaccatgatgatggatgggtcgccatacttttaggctttttggtg
gctttcctgctgctggggctggtgggaatgttggtgctcttctatctgcaaaatcatcgc
tacaagggctcctatcacaccaatgagcccaaggccacccatgattaccattctggcagc
aaacctcccctccctacttcgggccctgcccaggctcccacccccacaccagctcccacc
caagttccagcccctgcccctgcccctgcccctgcccctgcctctggtccaggcccccgg
gaccagaacctaccccagatcttggaagaatccagatctgaatga
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