Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955860
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Entry
101955860 CDS
T10664
Symbol
Optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04137
Mitophagy - animal
iti04140
Autophagy - animal
iti05014
Amyotrophic lateral sclerosis
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101955860 (Optn)
04137 Mitophagy - animal
101955860 (Optn)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101955860 (Optn)
05022 Pathways of neurodegeneration - multiple diseases
101955860 (Optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101955860 (Optn)
Membrane trafficking [BR:
iti04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101955860 (Optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101955860 (Optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
101955860 (Optn)
Xenophagy
Cargo receptors
101955860 (Optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
Motif
Other DBs
NCBI-GeneID:
101955860
NCBI-ProteinID:
XP_040133714
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MSHQPLSCLTEKGDSPIETTGNGPPILAHPSLDTFTPEELLQQMKELLVENHQLKGEQPL
NPYSPLTWGLYETKAPELEEVKSEAEALDSCFQVPSMALLQLKAEYHLGSGRPIGPLVDL
FMCFTPCHFQDPTGDSRLPKVVAEQEVEQLKTQVARLQAEKADLLGIVSELQLKLTASGS
SEDSFVEIKMAEGEADGTLKEIKNNLEPTRTDSIDMSKSAKGAKNYLEFEELTVSQLLLC
LREGNQKVERLEIALKEAKERISDFENKANDHSEVETQTEGSKEKENEEEKDTETVGSEV
EMLNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPAELNEKQELVYNNK
KLELQVESMRSEIKMEQAKTEDGKSKLAILQSTHNKLLQEHNNALKTIEELIRKESEKVD
RAVLQELNAKLEMAERALASKQLQMDEMKQTIAKQEEDLETMGVLRTQMEVYCSDFHAER
AAREKIHEEKEQLALQLAILLKENNVFEDGGSRQSLMEMQSRHGARTSDPDQQAYLIQRG
AEDRNWRQEQSQEYSNSFLSQVWRSSA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccaacctctcagctgcctgactgaaaagggggacagtcccattgagaccaca
ggaaatggaccccccattctggctcaccccagcctggatacattcaccccagaggagctg
ctacagcagatgaaggagctcttggttgagaaccaccagctgaaaggtgagcagccactc
aacccgtattctccactcacctggggcctttatgaaacaaaggctccagaattggaagaa
gttaaatcagaagctgaagctttggacagctgctttcaagttcccagcatggcactgctc
cagctgaaggcagagtatcacctgggcagcgggagacccatcgggcccttagttgatttg
tttatgtgctttactccttgtcatttccaggaccccactggtgactctaggcttcccaag
gtggtagcagagcaggaagtggaacagctgaagacccaggtggcacgccttcaggctgaa
aaggcagacctgctgggcatcgtgtctgaattacagctcaagctgactgccagcggctcc
tcagaagactcctttgttgaaatcaagatggctgaaggagaagcagatggaacattaaaa
gaaatcaagaataatcttgagcctacaagaacagactccattgacatgagcaaatctgcc
aaaggtgccaagaattatttggaatttgaagaattaactgtgagccagctcctgctttgc
ctaagggaaggaaaccagaaggtggagagacttgaaattgcactcaaagaagccaaagaa
agaatttcagattttgaaaataaagcaaatgatcattctgaagttgagacccagacagag
ggcagcaaagaaaaagagaatgaagaggagaaagacacagaaactgttggaagcgaagta
gaaatgttgaaccttcaggtgacatcgctgtttaaggagcttcaagaggctcatacaaaa
ttgagtgaagctgagctgatgaagaagagacttcaagaaaaatgccaggctcttgaaagg
aaaaattctgcaaccccagcagagctgaatgaaaagcaagagctcgtttataataacaag
aagctagagctgcaagtggaaagcatgcgatcggaaatcaaaatggagcaagctaaaaca
gaggatggaaagtccaagttagccattctacagtcaacacacaacaagcttcttcaagaa
cataataatgcattgaaaacaattgaggaactaataaggaaagagtcagaaaaagtggac
agggcagtgctgcaggaactaaatgcaaaactggaaatggcagagagggcactggcttcc
aagcagcttcaaatggatgagatgaaacagaccattgccaagcaggaggaggatctggaa
accatgggtgtccttaggactcagatggaggtttattgttctgattttcatgctgaaaga
gcagcaagagagaagattcatgaagaaaaggagcaacttgcattgcagctggcaattttg
ctaaaagagaacaacgtttttgaagatggaggcagtaggcaatccttgatggaaatgcag
agccggcatggggcaagaacaagtgacccagaccagcaggcttacctcatccaaagagga
gctgaggataggaactggcggcaagagcaatcacaagagtattccaattcattcctgtcc
caagtgtggagaagttctgcctga
DBGET
integrated database retrieval system
