Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101955971
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Entry
101955971 CDS
T10664
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03018
RNA degradation
Brite
Enzymes [BR:
iti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101955971 (Dhx36)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101955971 (Dhx36)
Translation factors [BR:
iti03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101955971 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101955971
NCBI-ProteinID:
XP_005325748
UniProt:
I3M3A1
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSYDSHQNWSRDGGSRSSGGGYGGGRGGSRGPGGSGGGRGGRGRHPGHLKGREIGLWYAK
KQTQKNKDAERQERAVVHMDERREEQIVQLLNSVQAKNDKDSEAEISWFAPEDHGYGTEV
SDETKPSSEKKLDSQEKKVKNQDKKTFRIRDKSYIDQDSEYLLQENEPDGTLDQKLLEDL
QKKKTDPRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNY
IERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSIL
YCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLQFRSDLKVILMSAT
LNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEQRSQFKRGFMQGHVN
RQEKEEKEAIYKERWPDYIRELRRRYSASTVDVIEMMDDDKVDLNLIAALIRYIVLEEED
GAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIV
IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP
GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVL
LSIKHLMELNALDKLEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK
DPFVIPLGKEKIADARRKELAKQTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSS
NTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRL
NLGKKRKMVKVYTKTDGLVALHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPY
CLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVD
WKDTKSRDCAVLSAITDLIKTQEKATPRNFPPRFQDGYYS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactcccatcagaactggagccgcgacgggggatcccgaagctctggcggg
ggctatggcgggggccgcgggggaagcagaggacctgggggtagtgggggagggcggggc
ggccgcggccggcatcccgggcacctgaagggccgcgagattggcctgtggtacgcgaaa
aagcagacgcagaagaacaaggatgccgagaggcaggagagagctgtggtacacatggat
gaacgacgagaagagcaaattgtgcagctgctaaattctgtccaagcaaagaatgataaa
gattcagaagcagagatatcctggtttgcgcctgaggatcatggatatggtactgaagtt
tctgatgagacaaaaccaagctcagagaagaaacttgacagccaggaaaagaaagtgaaa
aaccaagataaaaagacatttaggatcagggacaaatcatacattgaccaagattctgag
tatctcctacaagaaaatgaaccagatggaaccttagaccaaaagttactggaggattta
caaaagaaaaaaactgaccctcgttatattgaaatgcagcatttcagggaaaagctgcct
tcatatggaatgcaaaaggagttggtaaatttaattgataatcatcaagtaacagtaata
agtggtgaaactggttgtggaaaaaccactcaagttactcagttcattttggataactac
attgaaagaggaaaaggatctgcatgcaggatagtttgtactcagccaagaagaattagt
gccatttcagttgcagagagagtggctgcagaaagggcagaatcttgtggcaatggaaac
agcactggataccaaattcgtctccagagtcggttgccaaggaaacagggttctatctta
tactgtacaacaggaatcatccttcagtggctccagtcagacccgcatttatccagtgtt
agtcatattgtacttgatgaaatccatgaaagaaatctacagtcagatgttttaatgact
gtgattaaagatcttctccagtttcgatctgacctaaaagtaatattgatgagtgcaaca
ctgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatatacctggt
tttacttttccggttgtagaatatcttttggaagatattattgaaaaaataagatacgtt
ccagaacagaaagaacagagatcccaatttaagaggggtttcatgcaaggacatgtaaat
agacaagaaaaagaagaaaaagaagcaatctataaagaacgatggccagattacatcagg
gaactgcgaagaaggtattctgcaagtactgtagatgttatagaaatgatggatgatgat
aaagttgatctgaatttgattgctgcccttattcggtacattgttttggaagaagaggat
ggtgcaatactggtctttctaccaggctgggacaacatcagcacattacatgatctattg
atgtcccaagtgatgtttaaatcagataagtttattattatacctttgcattcactgatg
cctacagtaaaccagacacaggtatttaaaagaactcctcctggtgttcggaagatagta
attgctaccaacattgctgagactagcattaccatagatgatgtagtttatgtgatagat
ggaggaaaaattaaagagacacactttgacactcagaacaacatcagcacaatgtctgct
gagtgggttagtaaagctaatgccaaacagaggaaaggtcgagctggaagagttcaacct
gggcattgctatcacctgtataatggcctgagagcaagtcttctggatgattatcaacta
ccagagattctgagaacacctttggaagaactttgtttgcagataaagattttaagacta
ggtggaattgcttattttctgagtaggttaatggatccaccatcaaatgaggcagtgtta
ctgtccataaaacacctgatggaactgaatgctctggataaactagaagaactgacacct
cttggagtccacttagcccggttaccagttgagccacatattgggaagatgattcttttt
ggcgctctcttctgctgcttagacccagtgctcaccattgctgctagtctcagcttcaaa
gatccctttgtcattccattgggtaaagaaaagattgcagatgcaagaagaaaggaattg
gcaaagcaaactagaagtgatcacctgaccgttgtgaatgcatttgagggctgggaagaa
gctaggcggcgtggttttagatatgagaaggactactgctgggagtattttctgtcctca
aacacactgcagatgctgcataacatgaaaggacagtttgctgagcatcttcttggagct
ggatttgtaagcagtagaaatcctaaagacccagaatctaatataaattcagataatgag
aagataattaaagctgtcatctgtgctggtttatatcccaaagttgctaaaattcgacta
aatttgggtaaaaaaagaaaaatggtaaaagtttacacaaaaacagatggcctggttgct
cttcatcctaaatctgttaatgtggagcaaacagattttcactacaactggcttatctat
cacctgaagatgagaacaagtagtatatacttgtatgactgcacagaagtttccccatac
tgtctcttgttctttggaggtgatatttccatccagaaggataatgaccaggaaaccatt
gctgtagatgaatggatcgtgtttcaatctccagcaagaattgcccatctcgttaaggaa
ttaagaaaggagctagatatccttctacaagagaagattgaaagccctcatcctgtagac
tggaaggacacgaaatccagagactgtgctgtcctgtcagctattacagacttaatcaaa
acacaggagaaagcaactcccaggaactttccaccacgcttccaggatggatattacagc
tga
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