Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956008
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Entry
101956008 CDS
T10664
Symbol
Lrrn3
Name
(RefSeq) leucine-rich repeat neuronal protein 3
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101956008 (Lrrn3)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
101956008 (Lrrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
Ig_3
I-set
LRR_9
fn3
ig
LRRNT
LRR_1
Ig_2
LRRCT
LRR_At5g56370
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
101956008
NCBI-ProteinID:
XP_005335996
UniProt:
I3MZ64
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MKDMPLQIHVLLGLAITILVQAVDKKLDCPQLCTCEIRPWFTPRSIYMEASTVDCNDLGL
LSFPARLPADTQILLLQTNNIAKIEYSIDFPVNLTGLDLSQNNLSSVTNINVKKMHQLLS
VYLEENKLTELPEKCLSGLSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMIN
SKWFDALPNLEILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLES
ISFYDNRLIKVPHVALQKVVNLKFLDLNKNPINRIRRGDFSNMLHLKELGINNMPELISI
DSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLESLMLNSNALSALYHGTIESLPNL
KEISIHSNPIRCDCVIRWINMNKTNIRFMEPDALFCVDPPEFQGQNVRQVHFRDMMEICL
PLIAPESFPSNLDVEANSYVSLHCRATAEPQPEIYWITPSGQKLLPNTLTDKFYVHSEGT
LDISGITPKEGGLYTCIATNLVGADLKSIMIKVDGSFPQDNNGSLNIKIRDIQANSVLVS
WKASSKILKSSVKWTAFVKTENSHAAQSARIPSDVKVYNLTHLNPSTEYKICIDIPTIYQ
KNRKQCINVTTKGVDQGRKEYEKSNTIMFMACLGGLLGIIGVICIFSCLSQEINCDDKHS
HVRNYLHKPTFAFSELYPPLINLWETGKEKSTNLEVKATVIGVPTNMS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatgccactccaaattcatgtgctacttggcctagctattactatactagta
caagctgtagataaaaaattggattgcccacagttatgtacatgtgaaatcaggccttgg
tttacacccagatccatttatatggaggcatctacagtggattgtaatgatttaggtctt
ttaagtttcccagccagattgcctgctgacacacagattctgctcctacagactaacaat
attgcaaaaattgaatattccatagactttccagtaaaccttactggcctggatttatct
caaaacaatttatcttcagtcaccaatattaatgtaaagaagatgcatcagctcctttct
gtgtacctagaagaaaacaaacttactgagctgcctgaaaaatgtctgtctggactgagt
aacttacaagaactctatattaatcacaacttgctttctacaatttcacctggagctttt
attggcctacataatcttcttcgacttcatctcaattcaaatagactgcagatgatcaac
agtaagtggtttgatgctcttccaaatctagagattctgatgattggagaaaatccaatc
atcagaatcaaagacatgaactttaagcctcttatcaatcttcgcagtctggttatagct
ggtataaacctcacggaaataccagataatgccttggttggacttgaaaacttagaaagc
atctctttttatgacaacaggcttatcaaagtgccccacgttgctcttcaaaaagtcgta
aacctcaaatttttggatttaaacaaaaatcctattaatagaatacgaagaggtgatttt
agcaatatgctacacttaaaagagttggggataaataatatgcctgagctgatttccatt
gacagtcttgctgtggataacttgccggatttaagaaaaatagaagctactaacaaccct
agattgtcttacattcaccctaatgcatttttcagactccccaagctggaatcactcatg
ttgaacagcaatgccctcagtgccctataccatggtaccattgagtctctgccaaacctc
aaagaaatcagcatacacagcaatccaatcaggtgtgactgtgtcatccgttggattaat
atgaacaaaaccaacattcgatttatggagccagatgcactgttttgtgtggacccacct
gaattccaaggccagaatgttcgacaagtgcatttcagggatatgatggaaatttgcctc
cctcttatagctcctgagagctttccttctaatttggacgtagaagctaatagctatgtc
tcccttcactgtagagcaacggcagagccacagcctgaaatttactggataacaccttct
ggtcaaaaactattacctaatactctgacagataagttctatgttcattctgaaggcaca
ctagatataagtggcataacccccaaagaagggggtttatatacttgtatagcaactaac
ctagttggtgctgacttaaagtctattatgatcaaagtggatggttcttttccccaagat
aacaatggatctttgaatatcaaaataagagatattcaggccaattcagttctggtatct
tggaaagcaagttcaaaaattctcaaatccagtgttaagtggactgcctttgtcaagact
gaaaattctcacgctgcccaaagtgctcgaataccatctgatgtcaaggtatataatctt
acgcatctgaacccatccactgagtacaaaatttgtattgatatccccacaatatatcag
aaaaacagaaaacaatgtataaatgtcaccacaaaaggtgtggaccaaggtcgtaaagag
tatgaaaagagtaacaccataatgtttatggcctgtcttgggggccttctagggattatt
ggtgtaatatgtattttcagctgcctctctcaagaaataaactgtgatgataaacatagc
catgtaaggaattacttacacaaaccaacctttgcattcagtgagctttatcctcctctg
ataaacctctgggaaacaggtaaagagaaaagtacaaacttagaagtgaaagcaacagtc
ataggtgtgccaacaaatatgtcataa
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