Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956018
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Entry
101956018 CDS
T10664
Symbol
Gpc6
Name
(RefSeq) glypican-6 isoform X1
KO
K08112
glypican 6
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
iti00535
]
101956018 (Gpc6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
101956018 (Gpc6)
Proteoglycans [BR:
iti00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
101956018 (Gpc6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
iti00537
]
Others
101956018 (Gpc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
DUF5856
Motif
Other DBs
NCBI-GeneID:
101956018
NCBI-ProteinID:
XP_005317102
UniProt:
I3MS15
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MPSWIGAVILPLSGLLLSLPARADVKARSCGEVRQAYGAKGFSLADIPYQEIAGEHLRIC
PQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRHKKFDEFFRELLENAEKSL
NDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWARLLERMFQLINPQY
HFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAARTFVQGLTVGREVANRVSKVSP
TPGCIRALMKMLYCPYCRGLPAVRPCNNYCLNVMKGCLANQADLDTEWNLFIDAMLLVAE
RLEGPFNIESVMDPIDVKISEAIMNMQENSMQVSAKVFQGCGQPKPAPALRSARSAPENF
NTRFRPYNPEERPTTAAGTSLDRLRTVWRTMQDSVTDIKEKLKLSKKVWSALPYAICKDE
RVTAGTSNEEECWNGHSKARYLPEIMNDGLTNQINNPEVDVDITRPDTFIRQQIMALRVM
TNKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDVCPTEFEFVTTEAPAVDPDRREEDSS
AAGLGHSLLSWSLVCMVLALQRLCR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttggatcggggctgtgattcttcccctttcggggctgttgctgtccctcccg
gcccgggcggatgtgaaagctcggagctgcggcgaggtccggcaggcgtacggtgccaag
ggattcagcctggcggacatcccctaccaggagatcgcaggggaacacttaagaatctgt
cctcaggaatacacgtgctgcaccacagaaatggaagacaagctgagccagcagagcaaa
ctagaatttgagaacctcgtggaagagaccagccattttgtgcggaccacttttgtgtcg
aggcacaagaagtttgatgaatttttccgagaacttctagaaaatgcagagaagtccctc
aatgacatgtttgtccggacctatgggatgctctacatgcagaattcggaagtgttccag
gacctcttcacggagctgaagagatattacactgggggcaacgtgaaccttgaagagatg
ctgaatgacttctgggctcggctcctggaacgaatgttccagctgatcaaccctcagtat
cacttcagtgaggactacctggagtgcgtgagcaaatacacagaccagctgaagccattt
ggagatgtgccccggaagctgaagatccaggtcacccgtgccttcattgctgctcgcacc
tttgtccaggggctgaccgtgggcagagaggttgcaaaccgggtttccaaggtcagcccc
acccccgggtgcatccgtgctctcatgaagatgctgtactgcccatactgtcgaggcctt
ccggctgtgagaccgtgcaacaactactgcctcaatgtcatgaaaggctgcctggcgaat
caggccgatctggacacagagtggaatctgtttatagatgcaatgctcttggtggcagag
cgactggaagggcctttcaacatcgagtctgtcatggaccccatagatgtcaagatttct
gaagccattatgaacatgcaggagaacagcatgcaggtgtctgcaaaggtctttcaggga
tgtggccagcctaaacctgctccggctctcagatctgcccgatcggctcctgaaaacttt
aatacacgttttaggccctacaatcccgaggaaaggcccaccacggctgcaggcacaagt
ttggaccggctgaggacggtgtggaggacaatgcaggatagtgtcacagacataaaagag
aaattgaagctctctaaaaaggtctggtcggcattaccctacgccatctgcaaggacgag
cgcgtgacagcgggcacttccaacgaggaggagtgctggaatggccacagcaaagccaga
tacttgcctgagatcatgaatgacggcttgaccaaccagatcaataaccctgaggtggat
gtggacatcacacggccagacaccttcatcagacagcagatcatggctctgcgcgtgatg
accaacaaattgaagaatgcctacaatggcaatgacgtcaacttccaggacaccagtgac
gaatccagcggctcagggagtggcagtgggtgcatggatgatgtgtgtcccacagagttt
gagtttgtcaccacggaggcccctgcagttgaccccgacaggagagaagaggactcttct
gctgccgggcttggccactccctgctgtcatggtccctggtctgcatggtgttggcactg
cagagactgtgcagataa
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