Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956212
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Entry
101956212 CDS
T10664
Symbol
Lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iti03016
]
101956212 (Lcmt2)
Enzymes [BR:
iti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
101956212 (Lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
101956212 (Lcmt2)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101956212 (Lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_2
Kelch_6
Kelch_1
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
101956212
NCBI-ProteinID:
XP_005316537
UniProt:
I3N9J6
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MGPRSRERRAGAVQSTNDSSALSKSSLAARGYVQDAFVSLLVPGTARRAPLIHRGYYVRA
RAVRHCVHAFLRRACAYPEAPRSQILSLGAGSDSLYFCLKTDGLLARAAVWEVDFPDVAR
RKAERIAETPELCALTGPFQRGSPASVLCFESLDYHILGLDLRQLQELDEALASAGLDVT
TPTLLLAEAVLTYLEPVSAASLIAWAARRFPDALFVVYEQMKPQDAFGQFMLQHFQQLNS
PLHGLDSFPDVEAQRCRFLQAGWTACSAMDMNEFYHCFLPAEERWRIENLEPFDEFEEWH
LKCAHYFVLAASRGDTLSQTLVFPPAEVFPRVDPASPSGVFDARIVTNDNQGSTLKTFGH
ASVLLSSGIILSAGGFGEQKRRHCRVNKFHLLSRNSDSEWKGFHIDSCGTGTQWDGRLYH
TMTRLSDTQVLVLGGRLSPVNPALSPLQIHLFKNEDNSTESLNVTVTRAGPGNFTLSCWR
HSTTEVSYKNQKYLFVYGGRSVLEPVLSDWHFLHVGTMASVKIPVEGEAPEARHSHSACS
WQGGALIAGGLGASEEPLNSVLFLRPISCGFLWESIDIQPPITPRYSHTAHVLNEKLLLV
GGIWIHSSLVPGVTVVNLTTGLSSEYQIDTTCVPRPLMLHNHTSILLPEEQQLLLLGGGG
NCFSFGTYFNPHTVTLDISSLSVGQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgggcccgcggagccgggagcggcgggcaggagcagtacagagtaccaatgacagcagc
gctctcagcaagagttccctagccgcgcgtgggtacgtgcaggacgccttcgtctcgctg
ttggttccggggaccgcgcgccgcgcgccgcttattcacagaggttactacgtccgtgcg
cgcgcggtgcggcattgtgtacacgcctttctgaggcgagcgtgcgcgtaccctgaggcg
cctcgctcgcagatcttgtctttgggcgcgggttctgactctctgtatttctgcctcaaa
accgatggcctcctggccagggctgcagtatgggaagtggatttcccggatgtggcgcgg
cgcaaagccgagagaattgcagagacaccggaactgtgcgcgttaactgggcctttccag
aggggcagtcccgcgtccgtgctgtgctttgagagcttggactaccacatcctgggcttg
gacctaaggcagctccaggaattggatgaggccctggcctccgcgggcttggacgtgacc
acacccactctgctcctggccgaggcggtgctgacctacctcgagccggttagtgctgcc
tccctcattgcctgggcagcccgacgttttcctgatgccctttttgtggtctatgagcaa
atgaagcctcaagatgcatttgggcagttcatgctgcaacactttcagcagctgaattcc
ccccttcatggcctggacagctttccagatgtggaggcccagcggtgccgcttccttcaa
gctggctggactgcctgtagtgccatggacatgaatgaattctatcactgctttctcccc
gcagaggaacgctggcggatagaaaatcttgaaccctttgatgagtttgaggagtggcat
cttaagtgtgcccactacttcgttttggcagcctctaggggagacaccctgtcccagact
ctggtgtttccacccgcagaggtatttcctcgagtagatcctgcttcaccttcaggagtc
ttcgatgccagaatagtcactaatgacaatcagggctcaactcttaaaacattcggccat
gcttctgtcctcctgagctctggcattattctcagtgcaggaggatttggagaacagaag
aggcggcactgcagagtgaacaagtttcacttgctgtcaagaaatagtgactctgaatgg
aaaggcttccatatagacagttgtgggacgggaacccagtgggatggacgtctttatcac
accatgacaagactttcagatactcaggttttggttctgggagggagactgtccccagta
aatccagccttgagccctctacagattcatttatttaaaaatgaagataatagcactgag
agcctgaatgtgacagtaacaagggctggtccaggaaatttcactttgtcttgttggcgg
cattcaacaactgaagtgtcctataagaatcagaaatatttgtttgtatatgggggtcga
agtgtgctagaacctgtactaagtgactggcatttcttgcatgtagggacaatggcttcg
gtcaagatcccggtggaaggggaagcacctgaagctaggcattcccacagtgcctgcagt
tggcaagggggagcccttattgctggaggtcttggggcttctgaggagccattgaactct
gtactctttctgaggccaatctcttgtggatttctctgggaatcaatagatatccaacct
cctattaccccaaggtactcccacacagctcatgtactcaatgaaaagcttctactggta
ggagggatctggattcattcttccttagtcccgggagtgactgttgtcaatttgactaca
ggattgagctctgagtatcagattgacacaacatgtgtgccgcggccattaatgttacac
aaccatactagcatcctccttcctgaagagcaacagctcttgctccttggaggtgggggt
aattgcttttcctttggtacttatttcaacccccatacagtgacattagatatttcttcc
ttaagtgttgggcagtaa
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