Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956249
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Entry
101956249 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: optineurin
KO
K19946
optineurin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04137
Mitophagy - animal
iti04140
Autophagy - animal
iti05014
Amyotrophic lateral sclerosis
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101956249
04137 Mitophagy - animal
101956249
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101956249
05022 Pathways of neurodegeneration - multiple diseases
101956249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101956249
Membrane trafficking [BR:
iti04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101956249
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101956249
Autophagy
Mitophagy
PINK1-Parkin associated proteins
101956249
Xenophagy
Cargo receptors
101956249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
zf_C2H2_10
zf-C2H2
B3R
Motif
Other DBs
NCBI-GeneID:
101956249
NCBI-ProteinID:
XP_040133689
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MNRPSMLDQGKATAEDWHGGGKGGAGAQRMLSAPSSPGRAEDALTAAASSALGDCSAGTS
VMSHQPLSCLTEKGDSPIETTGNGPPILAHPSLDTFTPEELLQQMKELLVENHQLKVDLF
MCFTPCHFQDPTGDSRLPKVIAEQEVEQLKTQVASLQAEKADLLVIVSELQLKLTASGSS
EDSFVEIKMAEGEADGTLKEIKNSLEPTRTVSIDMSKYAKGAKNYLEFEELTVSQLLLCL
REGNQKVERLEIVLKEAKERISEFENKANDHSEVETQTEDSEEKENEEEKDTETVGSEVE
MLNLQAISLFKELQEAHTKLSEAELMKKRLXXRCQVLERKNSAIPAELNEKQELVYNNKK
LELQVESMRSEIKMEQAKTEDGKSKLAILQLTHNKLLQKHNNALKTIEELIRKESEKVNR
AVLQELNAKLEMAERALASKQLQMDEMKKTIAKQEEDLETMGVLRTQMEVYCSDFHAERA
AREKIHEEKEQLALQLAILLKEXNVFEDGGSRQSLMEMQSQHGVRTSDPDQQAYLIQRGA
EDRNWRQEQSQSIPIHSCPKCGEVLPDIDTLQIHVMDCII
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaccatctatgctggatcaaggcaaggccaccgcagaggactggcacggtggt
gggaagggcggcgcgggagcgcagcggatgctgtcagccccttccagcccagggagggca
gaggacgccctaacagcggccgccagtagcgccctgggcgactgctctgcgggaacttct
gtcatgtcccaccaacctctcagctgcctgactgaaaaaggggacagtcccattgagacc
acaggaaatggaccccccattctggctcaccccagcctggatacattcaccccagaggag
ctgctgcagcagatgaaggagctcttggttgagaaccaccagctgaaagttgatttgttt
atgtgctttactccttgtcatttccaggaccccactggtgactctaggcttcccaaggtg
atagcagagcaggaagtggaacagctgaagacccaggtggcaagccttcaggctgaaaag
gcagacctgctggtcatcgtgtctgaattacagctcaagctgactgccagcggctcctca
gaagactcctttgttgaaatcaagatggctgaaggagaagcagatggaacattaaaagaa
atcaagaatagtcttgagcctacaagaacagtctccattgacatgagcaaatatgccaaa
ggtgccaagaattatttggaatttgaagaattaactgtgagccagctcctgctttgccta
agggaaggaaaccagaaggtggagagacttgaaattgtgctcaaagaagccaaagaaaga
atttcagagtttgaaaataaagcaaatgatcattctgaagttgagactcagacagaggac
agcgaagaaaaagagaatgaagaggagaaagacacagagactgttggaagcgaagtagaa
atgttgaaccttcaggcgatatcgctgtttaaggagcttcaagaggctcatacaaaattg
agtgaagccgagctgatgaagaagagacttcannttagatgccaggtccttgaaaggaaa
aattctgcaatcccagcagagctgaatgaaaagcaagagcttgtttataataacaagaag
ctagagctgcaagtggaaagcatgcgatcggaaataaaaatggagcaagctaaaacagag
gatggaaagtccaagttagccattctacagttaacacacaacaagcttcttcaaaaacat
aataatgcattgaaaacaattgaggaactaataaggaaagagtcagaaaaagtaaacagg
gcagtgctgcaagaactaaatgcaaaactggaaatggcagagagggcactggcttccaag
cagcttcaaatggatgagatgaaaaagaccattgccaagcaggaggaggatctggaaacc
atgggtgtccttaggactcagatggaggtttattgttctgattttcatgctgaaagagca
gcaagagagaagattcatgaagaaaaggagcaactagcattgcagctggcaattttgcta
aaagaanncaacgtttttgaagatggaggcagtaggcaatccttgatggaaatgcagagc
cagcatggggtaagaacaagtgacccagaccagcaggcttacctcatccaaagaggagct
gaggataggaactggcggcaagagcaatcacaaagtattccaattcattcctgtcccaag
tgtggagaagttctgcctgacatagatacattacagattcatgtgatggactgcatcatt
taa
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integrated database retrieval system
