Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956471
Help
Entry
101956471 CDS
T10664
Symbol
Dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
iti03041
]
101956471 (Dhx35)
Enzymes [BR:
iti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101956471 (Dhx35)
Spliceosome [BR:
iti03041
]
Complex C
Other components
Complex C specific factors
101956471 (Dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
Cas3-like_C_2
AAA_7
nSTAND3
Motif
Other DBs
NCBI-GeneID:
101956471
NCBI-ProteinID:
XP_005329892
UniProt:
A0A287CX99
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MAAPLGTVKFWRPGTEGPGVSISEERQSVTENSGTTIVYNPYAALSIEQQRQKLPVFKLR
NHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGITQPRRVAAVTVAGRV
AEERGAVLGHEVGYCIRFDDCTDPLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHE
RTLYTDIAIGLLKKIQKKRGDLRLIVASATLDAEKFRDFFNQNETSDPTRDTCVILTVEG
RTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARA
LARTGMKKHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITIGGIVYVIDC
GFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFDKLPQSTVP
EMQRSNLAPVILQLKALGIDNVLRFHFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLG
LRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVIPSNQKSQAMRVHRKFAV
EEGDHLTMLNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSE
GDPDPVLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQ
TSKYYMRDVTAIESAWLLELAPHFYQQGTHLSLKAKRAKVQDL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcccttgggaaccgtgaaattctggcgacccggtacagaggggccaggtgtc
agcatctctgaagagagacaaagtgtcaccgaaaattctgggacaaccattgtttacaat
ccttacgccgccctttccatagagcagcagaggcagaagctgcccgtgttcaagcttagg
aatcatattttatacttgatagaaaactaccagacagtggtgattgttggagaaacagga
tgtgggaaaagcacacagattcctcagtacctggcggaagctggctggacagccgaagga
agagtggttggcattacccagcctcggagagtggctgctgttacggttgcagggcgagta
gctgaggagaggggagcagtgctgggccacgaggtgggctactgcatccgctttgacgac
tgcaccgacccgctggccacaagaatcaagtttcttactgatggaatgctggtcagggaa
atgatggttgatccattgttaacaaaatatagtgtcattatgctggatgaagcccacgag
aggaccttgtacactgacattgccattggcttgctaaaaaagattcagaaaaagcgtggg
gatcttcggttgattgtggcttcagccactctggatgcagagaaatttcgggattttttt
aatcaaaatgaaaccagtgatccaaccagggatacgtgtgtgatccttacagtggaaggg
cgaacatttccggtggatatcttttatctacaaagtcctgttccagattatatcaaatca
actgtggaaactgtggtaaaaattcaccagacagagggagatggagacatactagccttt
cttactggccaggaagaggtggaaactgtcgtgtcaatgctgatcgagcaggcccgggcc
ctcgctcgcactgggatgaagaagcacctccgggttctccccatgtatgcaggtctgcct
tcctttgagcaaatgaaagtgtttgaaagggtctcacgcagcgtcagaaaggtgatagtg
gccaccaatgtggcagaaacctccattacaatcggtggcattgtgtatgtgatcgactgt
ggctttgtgaaactgcgggcctacaatcccaggacggctatagaatgcttggtggtggtt
cctgtgtcccaggcgtccgccaaccagcgcgcaggacgcggtgggcgcaaccgctctgga
aagtgttaccgcctctatacagaggaagccttcgacaagttgcctcaatctactgttcct
gagatgcagcggagcaatttggcccctgtcatcctgcagctgaaagcgctagggattgac
aacgtcctcaggtttcatttcatgtcgccccctccagcacagtcgatggttcaagctttg
gagttactctatgctctgggaggtctagacaaagactgtcgcctaactgaaccacttggc
ctgagaatagcagagtttcctttgaatcccatgttcgccaaaatgctgcttgagtcagga
aattttggctgttctcaggaaattctaagcattgcagccatgatgcagatccagaatgtc
tttgtgatcccctcaaaccagaagtctcaggcaatgcgggtgcaccgaaaatttgctgtg
gaagagggcgatcacctcaccatgctcaatgtgtatgaagcgtttatcaaacacaataag
agctcccagtggtgccaggaacatttcctgaattacaagggtcttgtcagagctgcgacc
gtgagagaacagttgaaaaagcttcttgtcaagtttcaggtgcccaagaagtctagcgaa
ggtgatcctgatcccgtcctgaggtgcattgtttctggattctttgcaaatgcagcaagg
tttcattctaccggagcttataggactatccgggatgatcacgagctgcacatccaccct
gcgtccgtcctctatgcagagaagccgcctcgatgggtcatctacaatgaagttatacag
acctccaagtactacatgagagatgtgactgccatagaatctgcatggctgttggagctg
gctccacacttttatcagcaaggaacgcacctgtccctgaaagccaaaagggccaaggtc
caggacttgtga
DBGET
integrated database retrieval system
