Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956509
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Entry
101956509 CDS
T10664
Symbol
Zc3h12a
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101956509 (Zc3h12a)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101956509 (Zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
CUSTOS
UBA_N4BP1
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
101956509
NCBI-ProteinID:
XP_005317885
UniProt:
I3NAS2
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MSGTRGERPVQEASPTMSLWGLEDSHSCRGTPRPAREPTPEEASALELQMKVDFFRKLGY
SSSEIHSVLQKLGVQADTNTVLGELVKHSTANEHERQASQDPGPQLPLVPRGGGTPKAPS
LEPSLPEEDKEGSDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVTWFLERGHTDITVFVP
SWRKEQPRPDVPITDQHILRELEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAYDSDGVV
VSNDTYRDLQGERQEWKRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPLSSE
HRKQPCPYGRKCTYGVKCRFFHPERPSRPQRSVADELRANALLSPPRAPGKDKSSQRPST
SSQSGSLPAEGEQSSQEGKKLGAQAPSGPRQEGLTQTFAPAGRGCLPSGGSGGHLGPTDW
LPQTLDSLPYISQDCLDSGIGSLESQMSELWGVRAGGPGEPGPPQGPYSGYRHYGSELQA
VPAFPAFGRAMGAGHFSVPADYTPPPRAFASREYWSEPYPLPPPTPVLQEAPVPGPGASG
GPWGGAGGLAKERASVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAEILSYKSQHLTE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacccgaggagagaggcctgtccaggaagccagccccaccatgagtctgtgg
gggcttgaggacagccacagctgtcgcggtaccccccggcctgcccgggagcccacccca
gaggaggcatcagctttggagctacagatgaaagtggacttcttccggaagctgggctac
tcatcctctgagatccacagcgtcctgcagaagctgggggtccaggcagacaccaacaca
gtgctgggggagctggtgaagcatagcacagctaacgagcatgagcgccaggcctctcaa
gaccccggccctcagctccctctggtgccccggggtggaggcacccccaaggcccccagc
ctggagccctcactcccagaggaggacaaggagggcagtgacctgaggccagtggtcatc
gatgggagcaacgtggccatgagccacgggaacaaggaggtgttctcctgccggggcatc
ctactggctgtgacctggtttctagagcggggccacaccgacatcacagtgttcgtaccg
tcctggaggaaggagcagcctcggcccgacgtgcccatcacagaccagcacattctgcgg
gaactggagaagaagaagatcctggtgttcacaccgtcccggcgcgtgggaggcaagcgg
gtggtatgctatgatgaccgcttcatcgtgaagctcgcctacgactcggatggggttgtg
gtctccaacgacacctaccgggacctccagggcgaacggcaggagtggaagcgcttcatc
gaggagcgactgctcatgtactcctttgtcaatgacaagttcatgcccccggatgacccc
ttgggccggcatggacccagcctggacaacttcctgcgtaagaagccactttcttctgaa
cacagaaaacaaccatgcccttatgggaggaaatgcacctacggggtcaagtgccgattc
ttccaccctgagcggcccagccgcccccagcgctccgtggctgatgagctccgtgccaac
gccctcctctcaccccccagggcccctggcaaggacaaaagtagccagcggccttccact
tcctctcagtctggctctctgcctgcagagggtgagcagagcagccaggagggaaagaag
ctgggggcccaagcaccctcagggccccgccaggaggggctgactcagacctttgcccct
gcgggcaggggctgcctacccagcggaggcagcggtggacacttggggcccacagactgg
ctcccgcagaccctggactcgctcccatacatctcccaggactgcctggactctggcatc
ggctccctggaaagtcagatgtcagaactgtggggggttcgggcgggaggccctggtgag
ccgggaccccctcagggcccctactctggctaccgccattatgggtccgagctccaggct
gtgcctgccttccctgcctttggacgggccatgggtgccggccacttcagtgtccctgct
gactacacgcccccaccacgcgcattcgcgtcccgagagtactggtctgagccctacccg
ctgcccccacctaccccagtcctccaggaggccccggtgccaggcccaggggctagcggg
ggtccctggggtggggcggggggcctggccaaggagcgggccagtgtgtacaccaagctg
tgtggcgtcttccccccgcacctggtggaggccgtgatggggcgcttcccgcagctcctg
gacccccagcagctggcggcggagatcctttcttacaagtcgcagcacctcactgagtga
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