Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956645
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Entry
101956645 CDS
T10664
Symbol
Snx6
Name
(RefSeq) sorting nexin-6
KO
K17920
sorting nexin-5/6/32
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101956645 (Snx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101956645 (Snx6)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101956645 (Snx6)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Macropinocytosis
Sorting nexins
101956645 (Snx6)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101956645 (Snx6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
101956645
NCBI-ProteinID:
XP_040131294
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MRQSLLLCLPHLIFFLGALGPPTQQEGLDDGPDFLSEEDRGLKAINVDLQSDAALQVDIS
DALSERDKVKFTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPR
PDFDASREKLQKLGEGEGSMTKEEFTKMKQELSSEYLAIFKKTVAMHEVFLCRVAAHPIL
RKDLNFHVFLEYNQDLSVRGKNKKEKLEDFFKNMVKSADGVIVSGVKSYGCLCYLLYLIW
CISHVADSCSVSIFKLMTKYILETFSIGAADDYNRIGSSLYALGTQDSTDICKFFLKVSE
LFDKTRKIEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARA
KNKDVLQAETSQQLCCQKFEKISESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNL
QLLQNCLAVLNGDT
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagagtctccttttgtgtcttccccacctcatcttcttcctcggcgcgctcggc
ccgccgacccagcaggaaggcctggacgatggccccgacttcctctcggaggaagaccgc
ggacttaaagcaataaatgtagatcttcaaagtgatgctgcgctgcaagtggacatttct
gatgctcttagtgagagggataaagtaaaattcactgttcacacaaaaagttcattgcca
aattttaaacagaacgagttttctgttgttcgacaacatgaagaatttatctggcttcat
gattccttcgttgaaaatgaagactatgcaggatatattattccaccagcaccaccaaga
cctgattttgatgcttcaagggaaaaactacagaagcttggagaaggagaagggtcaatg
acaaaggaagaattcacaaagatgaaacaggaactttctagtgaatatttggcaatattc
aagaagacagttgcaatgcatgaagtgttcctatgtcgtgtggcagcacatcctattttg
agaaaagatctaaatttccatgtcttcttggaatataatcaagatttgagtgtgcgagga
aaaaataaaaaagagaaacttgaagatttctttaaaaacatggttaaatcagcagacgga
gtaattgtttcaggagtaaagagttatggttgtttatgttatttactttacttgatttgg
tgtatctcacatgttgcagatagctgttcagtcagtatttttaaattaatgaccaaatat
attcttgaaactttttccataggtgctgcagatgattacaatagaattggttcttcatta
tatgctttaggaactcaggattctacagatatatgcaagtttttcctcaaagtttcagaa
ctgtttgataaaactagaaaaatagaagcaagagtatctgctgatgaagacctcaaactt
tctgaccttttgaaatattacttaagagaatctcaagcggctaaggatctcctctaccga
agatctcgatcactagtggattatgaaaatgctaacaaagcactggataaagcaagagcg
aaaaataaagatgttctacaggctgaaacatcccaacaattatgttgtcagaagtttgaa
aaaatatctgaatctgcaaaacaagaacttatagattttaagacaagaagagttgctgca
tttagaaaaaatttagtggaacttgcagaattagaactgaagcatgcaaagggtaacctc
cagttactgcagaactgcctggcagtgttaaatggagacacataa
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