Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956700
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Entry
101956700 CDS
T10664
Symbol
Herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101956700 (Herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101956700 (Herc3)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101956700 (Herc3)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
HECT type E3
101956700 (Herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
101956700
NCBI-ProteinID:
XP_005337584
UniProt:
I3M2I0
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYWSLGQPGIGTNLQGIVAEPQVCRFISDRSVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHEREGNKPEQIGALADQHIIHVACGESHNLALSDRGQLFSWGAGSDGQLGLMT
TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS
PQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA
CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFK
YHIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNA
NTINGVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSMILE
QILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDTNP
SKVLDNWWSQVCPKYFMKLINLYKGAVLYLLRGRKTFLIPVLFNNYITAALKLLEKLYKV
NLKVKHVEYDAFYIPEISSLVDIQEDYLMWFLHQAGMKARSSIIQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDT
CFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQE
LLDYPGEDVEETFCLNFTICRESYGVIEQKKLIPGGDKVTVCKDNRQEFVDAYVNYVFHI
SVHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEELEETAIYKGDYSATHP
TVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTASGEEYLPVAHTCYN
LLDLPKYSSKEILSARLTQALDNYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgctggggatattggtctctgggccaaccaggtatcggcaccaacctgcaagga
attgtggctgagccacaggtgtgtagattcatatcagacagaagtgtcaaggaagtggcc
tgtggaggaaaccactcagtgttcctgctggaggatggagaggtgtacacatgtggcttg
aacaccaaggggcagctgggccatgagagggaaggaaacaagccagaacaaattggagct
ctggcagatcagcacattattcatgtggcatgtggagagtcccacaatctggcccttagt
gaccggggccagctgttctcttggggtgcagggagtgatggtcaactaggactcatgact
actgaggattctgtggcagtgcccaggttaatacagaagctgaaccaacagacaatatta
caagtttcctgtggcaactggcattgcttggctcttgcagcagatggccagttcttcacg
tggggaaaaaacagccatggtcagctggggctggggaaggagttcccttctcaagccagc
ccgcagagggtgaggtccctggagggcatcccgttggcccaggtggtagcaggaggggct
cacagctttgccctatctctctcaggagctgtttttggctgggggatgaataatgcagga
cagctaggactcagtgatgaaaaagatcgagagtctccttgccatgtaaaacttttacga
acccagaaagttgtctatattagttgtggagaagaacatacagcagtcctcacaaagagt
ggaggtgtgttcacctttggtgctggttcttgtgggcaacttggacatgactccatgaat
gatgaggttaatccaagaagagttctagagctgatgggcagtgaagtaactcagattgct
tgtggcagacaacacactctagcctttgtgccttcttctggactcatctacgcatttggt
tgtggagctagaggtcaactaggaactggacacacttgtaatgttaaatgcccatctcct
gtgaagggttattgggctgcccacagtggacagctttcagcccgagccgatcgctttaaa
tatcatattgttaagcagatcttctctggaggagaccaaacttttgtactctgctccaaa
tatgagaattcttctcctgctgttgactttaggaccatgaaccaagcacattataccagt
ctaataaatgatgaaaccatagcagtttggagacaaaaactctcagaacacaacaatgca
aatacaatcaatggcgttgttcagatattatcttctgcagcctgttggaatggaagtttt
cttgaaaaaaagattgatgaacattttaaaacaagtcccaaaattcctgggattgatctg
aactcaactagggtattatttgagaaattaatgaactctcagcactccatgattctagaa
cagatcttaaacagctttgaaagttgcctgattccccagttgtcaagttcaccaccagat
gttgaagcaatgaggatctacttaatactacctgagtttcccctactccaggattccaag
tattatataacattgactattcccttggcaatggccattctgcgattggatacaaaccct
agcaaagtattagataactggtggtctcaggtatgcccaaagtatttcatgaagctgata
aacctctataaaggagcagtcctttatctactgagagggagaaagacgttcttaattcct
gtactgtttaacaattatattacagcagctctcaagctcttggagaaattatataaggta
aatcttaaagtgaaacatgtggaatatgatgcattttacattcctgagatttccagtctc
gtggacattcaggaagactacctcatgtggttcttacatcaagcagggatgaaggctaga
tcatctataatacaggatgctgtaacactttgttcgtatcctttcatttttgatgcccaa
gctaagaccaaaatgttgcagactgatgctgaactacagatgcaggtggcagtcaatgga
gccaatctgcagaatgtcttcatgcttctcactctggagcctctgctggccagaagcccc
ttcctggtccttcacgttcgcaggaataacctcgttggagatgccctaagagagttgagc
attcattctgatattgatttgaaaaagcctctcaaagtgatctttgatggggaagaagca
gttgatgctggtggtgttacaaaggagttcttccttttgttgttaaaagaacttttgaat
cccatctatggaatgtttacctactatcaggattcaaatctcttgtggttttcagataca
tgttttgtagagcacaactggtttcacttgattggcataacctgtggactagctatctac
aactccaccgtggttgatctccatttcccgttggctctttacaaaaaattactgaacgta
aaacctggcttggaagatttaaaggaactgtcacccactgaaggaaggagtcttcaagag
cttttagattaccctggtgaagatgttgaggaaactttctgcctcaatttcacgatctgc
cgagaaagctatggagtaattgaacagaagaagctgatacctggaggagacaaagtaact
gtgtgcaaggataacaggcaggaatttgtggatgcctatgtcaattatgtcttccacatc
tcggttcatgaatggtacacagcattctccagtggcttcctaaaggtgtgcggtggcaaa
gtacttgagctcttccagccttcagaactgagggccatgatggtggggaacagcaactac
aactgggaagaactagaagagactgccatctacaagggtgattactcagccacacatccc
actgtgaaactattctgggaaacatttcatgagtttccattggaaaagaagaagaagttt
ctcttattcctgactggcagtgaccggattcccatctatggcatggccagcctacagatt
gtcatccagtccacggccagtggggaggagtacttgcctgtggcccacacttgctacaac
ctgctcgacctccccaagtacagcagcaaagagattctgagtgcacgactgacccaggcg
cttgacaattatgaggggtttagtttggcctga
DBGET
integrated database retrieval system
