Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956719
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Entry
101956719 CDS
T10664
Symbol
Sec16b
Name
(RefSeq) protein transport protein Sec16B isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101956719 (Sec16b)
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101956719 (Sec16b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
101956719
NCBI-ProteinID:
XP_005319825
UniProt:
I3MKN8
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MRKTHSRQSSVQGNKTTVQLTQTQEKSRGSGMEPWAPLRPSQPRGRPMAPPKDPSRGLQS
GPHLPVPHPRHNGEGFHQWQDIRGSPRPLQDPRADHLQPPHAPRSGVDYYDGAYPSQGYS
RPGFEDPYQRYHSPTMREEYAYGSYYYRGHPQQLQEERVPRQGTPYIWHEDYGDQKYLGG
DRHRENQNSSFGMNSETQFQSISRSPYKDSPASSSAQERPGELFSESRLTGVCKNKPSLT
SKSNLVQQHESGLSSSSYELSQYMADAPEQYDPRATAVWSPGQAGDVSAAGPNTPVKFYI
PHVSVSFGPGGQLVCVCPNSPPDGQTALVELHSMEVILNDSEDQEEMRSFSGPLIREDVH
KVDIMTFCQQKAAQRLKSETPGSRDSALLWQLLVLLCRQNGSMVGSDIAELLMQNCKLEK
YKKQPPVANLINLTDEAWPVNSGPRNLLTGEVPPTVETPAQIVEKFTKLLYYGRKKEALE
WAMKNHLWGHALFLSSKMDPRTYNWVMSGFTSTLALNDPLQTLFQLMSGRIPQAATCCGD
KQWGDWRPHLAVILSNQAGDPELHQRAIVTMGDTLAGKGLVEAAHFCYLVAHVPFGHYTV
KTDHLALLGSSHSQEFLKFATTEAIQRTEIFEYCQMLGRPKSFIPSFQVYKLLYASRLAD
YGLASQALHYCEAIGAAVLSQGESSHPVLLVELIKLAEKLKLSDPLALERRRGDRDQEPD
WLLQLRRRHRELEQKAAGDIGDPPSARSDISGARGRITDTSCQDLLGHQGHSEVPGYHSA
LWPTPEQTGLPEPSPQQPFPLHQGPYPVGGGSGHTEAPVPLYSVPETHLQGPSSDSGGDS
VAVTGAPGGRVWEEALQTHPPSGESAASQDTSWQLDDPKDISKPQAPPAPRAHSFSESST
NVGQEDQEEPSEEADQKPSPSAAEREKPGDVKENAKSSGFGWFSWFRSKPASNVSPSGEE
DTSDSTDSEEPPRASSPHQGLSPMPLLESPPLPGAGASSRGTGGGDLGRSSSRGATAEGT
GTGGFSELEGVSSELYSRPGVLPPPALKGAVPLYNPSQVPQLPRAPSLSQPSRLAQRRYP
TQPC
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaacacattccaggcaatccagtgtgcagggaaataaaacaactgtacagctg
actcaaacccaagagaaatccagagggtcagggatggaaccttgggctcccctgcggcca
tctcagccacggggaaggcccatggcacctccaaaggaccccagccgagggcttcaaagt
ggacctcatctgcctgttcctcaccctcggcacaatggagagggattccaccaatggcaa
gacatccgtgggagcccacggccactgcaggacccccgggcagaccacctgcagcccccc
catgcacccaggtctggggtggactactatgacggggcctaccccagccaggggtactcc
aggccaggcttcgaggatccctatcagagatatcactctccaactatgagggaagaatat
gcctatgggagttattactaccgtggccatccgcagcagcttcaggaagaaagagtgcca
aggcaagggactccttacatctggcatgaagactatggagatcagaagtacctcggtggg
gatcgccatcgcgaaaaccagaacagttcatttgggatgaacagtgagacccagtttcaa
tccatcagccggagcccttataaagacagtcctgcttccagctctgcacaggagcggcct
ggggagctgttttcggagagtcggttaactggtgtctgcaagaataagccatcactgacc
agcaagtccaacctcgtccagcagcacgagtctggtctcagctccagcagctatgagctc
agtcagtacatggcggatgcccctgagcagtatgatcctagggcgacagcagtttggagt
ccaggtcaggcaggggatgtctcagcagcaggtcccaacacacccgtgaagttctacatc
cctcatgtgtctgtgagttttggtccaggaggtcagctggtgtgtgtgtgtcccaactct
ccccctgatgggcagacggcccttgtggagctacacagcatggaggttattcttaatgat
tctgaagaccaagaggaaatgagaagtttctcaggacccctgatccgggaagatgttcac
aaggtcgatatcatgacattttgccagcagaaagcagctcagaggctcaagtccgagacc
ccaggaagcagagactcagctctactgtggcaactgttagttctcctctgtcgccagaat
gggtccatggtggggtctgacatagctgagctgctgatgcaaaactgtaagctggagaag
tacaagaagcaacctcccgtggccaacctcatcaacctgaccgacgaggcctggccggtg
aactccgggccccgcaacctgctcaccggggaggtccccccgacggtggagacacctgcg
cagatcgtggagaaattcaccaagctgctgtactatgggaggaagaaggaggccttggag
tgggccatgaagaaccacttgtggggtcatgctttgttcctctccagcaagatggaccca
cggacctacaactgggtcatgagtggcttcaccagcacactggcgctcaacgaccctctg
cagaccctcttccagctcatgtcggggaggattccacaagcagccacgtgttgtggggac
aagcagtggggggactggaggccccacttggctgtgattctgtcaaatcaggctggggat
ccggagctgcaccaacgtgctattgtcaccatgggggacaccttggcggggaaagggctg
gtggaggccgctcacttctgctatctcgtggctcacgtgccctttggccactataccgtg
aagacagaccatctggccttgctgggcagcagtcacagccaagagtttttgaaattcgca
acaaccgaggctatccagaggacggaaatcttcgagtactgccagatgctgggccgcccc
aagtccttcatcccttcttttcaggtatataagctcctttatgcttcccgtctggcagat
tatggcctggcctcccaggccctgcattactgtgaagccatcggcgcagctgtcctgagc
cagggagagagtagtcaccctgtgctattagtggagctcatcaagctggcggagaaactg
aagctgtcagatcctctggctttagaaagacgccgtggggacagggaccaggagccagat
tggctacttcaactgcggaggaggcacagggagctggagcaaaaggcagcaggagacatt
ggagatcctccttctgctcgctcagatatttcgggagccagaggaagaatcacagacact
tcctgccaggatcttttgggacatcaaggccactcagaagtccctgggtaccactcagct
ctgtggccaacacctgagcagacgggcctccccgagcccagcccacagcagcccttcccc
ctgcatcagggcccctacccagtgggaggaggttcagggcacacggaggcgccggtgcct
ctctactcggttcctgagacccatctccaagggcccagcagtgacagtggcggagacagt
gtggcagtgacaggggctcctggaggaagggtctgggaggaagcactgcagacacaccct
ccctctggagagagcgcagcatcccaagacacctcttggcaactcgatgatccaaaggac
atttccaaacctcaggccccaccggcccccagagcgcacagtttctcggagagttccacc
aacgtgggccaggaagaccaggaagagccctctgaggaagcagatcagaaaccttccccc
agtgccgcagagagagagaagccgggggacgtgaaggagaacgcgaagagctcaggattt
ggctggttcagctggtttaggtccaagcccgcgagcaacgtgtcgccctctggagaggag
gacacctcagacagcactgactccgaggagccccccagagcgtcctctccccaccaggga
ctctcacccatgcctcttctcgagtctccacctctgcctggtgctggcgcctcctccagg
ggcacaggtgggggagaccttggaagatcctcgtccaggggggcaacagccgagggcact
gggactggagggttctcggagcttgagggtgtctcttctgagctctattccagacctggc
gttcttcctccacctgccttgaaaggggctgttccactctacaacccatctcaggttccc
cagctccccagggctcccagcctgagtcagcccagccgcctagctcagcgccgctaccca
actcagccttgctga
DBGET
integrated database retrieval system
