Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956784
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Entry
101956784 CDS
T10664
Symbol
Cltcl1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04142
Lysosome
iti04144
Endocytosis
iti04721
Synaptic vesicle cycle
iti04961
Endocrine and other factor-regulated calcium reabsorption
iti05016
Huntington disease
iti05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101956784 (Cltcl1)
04142 Lysosome
101956784 (Cltcl1)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
101956784 (Cltcl1)
09156 Nervous system
04721 Synaptic vesicle cycle
101956784 (Cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101956784 (Cltcl1)
09164 Neurodegenerative disease
05016 Huntington disease
101956784 (Cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101956784 (Cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iti04147
]
101956784 (Cltcl1)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
101956784 (Cltcl1)
Exosome [BR:
iti04147
]
Exosomal proteins
Proteins found in most exosomes
101956784 (Cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
101956784
NCBI-ProteinID:
XP_021588366
LinkDB
All DBs
Position
Unknown
AA seq
1667 aa
AA seq
DB search
MAQILPIRFQEHFQLPNLGINPTNIGFSTLTMESDKFICVREKVGEQAQVVIIDMNDPMA
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIGLKSKMKSHTMAEEVLFWKWISVNTIA
LVTETVVYHWNMEGDSQPMKMFDRHASLARCQMIHYRTDEYQKWLLLIGISAQQNRVVGA
MQLYSVERKVSQPIEGHAAAFAEFKIEGNTKPVTLFCFAVRSSTGGKLHIIEVGQPAAGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGAKHGVIYLITKYGYLHMYDLESAVCIYMNRISA
DTIFVTVPHELTSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLGLRLAVRSNLPGA
EELFVRKFSTSFAQGNYAEAAKVAASAPKGILRTSDTVQKFQSIPAQPGQASPLLQYFGI
LLDQGQLNKLESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPILALSVYL
RANVPSKVIQCFAETGQFQKIVLYSKKVGYIPDWISLLRSVMRISPEHGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDILKNDHPAEGHLQTQLLEMNLIHAPQVADAIL
GNQMFTHYDRIHIAQLCEKAGLLQRALEHYSDINDIKRAVVHTHLLSPEWLVNFFGSLSM
EDSMECLHAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHLKYIQAACKTGQIKEVERICRESSYYNPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYHNNLQKYIEIYVQKVNPSRLPAVVGGLLDVDCSEEVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHESCEEPATHNALAKIYIDSNNSPERFLRENAYY
DSSVVGQYCEKRDPHLACIAYERGQCDLELIQVCNENSLFKSEARYLVRRKDPELWAHVL
AETNPSRRHLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADQTRVMEYISRLDNYDAADIASIAISSVLYEEAFTIFYKFGVNAS
AIQVLIENIGNLDRAYEFAEKCNEPAVWSQLAQAQLQKDLVKEAIDSYIRADDPTSYLEV
VQAATKSNNWEDLVKFLQMARKNSRASYIETELIFALAKTSHLSELEDCINAPNNANIQQ
VGDRCYEEGMYEAAKLLYNNISNFARLASTLVHLGEYQAAVDSSHKANNTETWKEVCFAC
VDGQEFRLAQLCSLHIIIHADELEELIYYYQDRGYFEELMSLLEAALGLERAHMGMFTEL
AILYSKFKPQKMPEHLELFWSRVNIPKVLKAAEQAHLWAELVFLYDKYEEYDNAVLTMMS
HPIESWKEGQFKDFIAKVANIELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFFS
KAGQLPLVKPYLCSVQNHNNKNVNEALNHLLTEEEDYQGLRASIDAYDNFDNISLAQRLE
KHQMIEFRRIAAYLYKCNNRWAQSVELCKKDHLYKDAMQHASESRDPELAEKLLQWFLEE
GKWECFAASLFTCYDLLHPDVVLELAWRHNLMDFAMPYFIQVMREYLNKVDKLDALESLH
KHKEHVGEPAPLVFGQQLTLTVSSAGFPYGYAAAPAFTQPPVFGFSV
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattctccctatccgcttccaggagcacttccagctcccaaacctaggaata
aatccaaccaatattggatttagcacactgactatggagtctgacaagttcatatgtgtc
cgagagaaagtcggggagcaggcacaagtggtgattattgacatgaatgacccaatggca
cccatcagacgtcctatctcagcagagagtgccatcatgaatccagcttctaaagtgata
gctctgaaagctgggaagactcttcaaatctttaatattgggctgaaaagtaaaatgaag
tctcatactatggcagaagaggtgttattttggaaatggatctctgtgaacactattgcc
ttggtgactgagaccgtggtctaccactggaacatggaaggtgactcccagcccatgaag
atgtttgataggcatgctagtctggctaggtgccagatgatccactaccgaactgatgaa
taccagaagtggctgctccttattggcatctcagctcagcaaaaccgtgtggttggagca
atgcagctctattctgtggagaggaaggtttcacaacccatagaaggccatgctgctgcc
tttgcagagttcaagatagaagggaataccaagcctgtcactctcttctgctttgctgta
cgcagttccacaggaggcaagttgcacataattgaagttggacagcctgcagcaggaaac
cagccttttgtaaagaaagctgtggatgtgtttttccctccagaggcacagactgatttt
ccggtggctatgcagattggagccaaacatggtgttatatatttgatcacaaagtacggc
tacctacatatgtatgatttagagtctgctgtgtgcatctacatgaaccgtattagcgct
gacacaatctttgtaactgttccacatgaactaacctctgggattattggtgtcaacaaa
aaaggacaggtgctgtcagtttgtgttgaggaagaaaacattgtgaattacgcaaccaat
gtgcttcagaatccagacctgggtctgcgtttggctgttcgtagtaacctgccaggggca
gaggagttatttgtaagaaaattcagtacctcctttgcacaggggaactatgctgaagcc
gccaaagtagcagcatctgcaccaaagggaattctgcgtaccagtgatacagtccagaag
ttccaaagtatacctgcccagcctggccaagcctctcctttgctccagtactttggaatc
ctgcttgaccagggtcagctcaataaacttgaatctttagagctttgccggccagttctt
cagcaggggcgcaagcaactcttagagaagtggctgaaagaagataagctagagtgttca
gaggaactgggagatttggtcaaaactgctgaccctatactggctctgagtgtgtacctt
cgggcaaatgtaccaagcaaagttatccagtgttttgcagaaacaggccaattccaaaaa
attgtgctgtattccaaaaaggttggttatatcccagactggatctctttgctgaggagt
gtgatgaggatcagtccagaacacggcctgcagttttcccaaatgctagtgcaggatgag
gagccattggccaacattaaccagattgtggacgttttcatggaaaacagtttaattcag
cagtgtacttccttcttgctggacatcttgaagaatgatcacccagctgaggggcacctc
cagacccagctgttggaaatgaatctgatccatgcaccccaggttgcagatgccatcctt
ggaaatcagatgtttacacattatgatcgaatccatattgcccagctttgtgagaaggca
ggcctcctgcaacgggcgctggagcactacagtgacatcaatgacatcaagagggctgta
gtccacacccatcttctcagtcctgagtggcttgtcaatttctttggttccttgtcgatg
gaggattccatggagtgtctacatgccatgttgtctgctaacatcagacagaaccttcag
ctgtgtgtacaggtggcttctaagtaccacgaacagctgggcacacagtccttggtagag
ctttttgaatccttcaagagttatgaaggcctcttctacttcctgggctcaattgtgaac
tttagccaagacccagatgtgcatttgaagtacattcaggctgcctgcaagacagggcag
atcaaggaggtggagagaatatgccgcgagagcagctactataacccagatcgggtgaag
aatttcctaaaggaggctaagctcacagaccagctccccctcatcattgtgtgtgaccgc
tttgactttgtgcatgaccttgtcctgtatttataccacaacaacctgcagaagtacatt
gagatctacgttcagaaggtcaaccctagccgtctcccagctgtggttggagggctgctt
gatgtggattgttctgaagaagtaattaaaaacttaatcatggtggtgagaggacagttc
tctactgatgagctggtggctgaagtagaaaaaagaaacaggctcaaattgcttcttccc
tggctggagtctcggattcatgaaagctgtgaagagcctgccactcataatgcactggct
aaaatctacattgacagcaacaatagccctgagcgatttttgagagagaatgcctactat
gatagtagtgtggtgggccagtactgtgagaagcgggacccacatctggcctgcattgcc
tatgagcgcggacagtgtgacctagagctcatccaggtttgcaatgaaaattctctgttc
aaaagtgaggcccgctacctggtacgcaggaaggatccagagctgtgggcccatgtcctt
gcagagaccaacccatctaggagacacctaattgaccaggtggtacaaacagcattatca
gaaacacaggatcctgaagaggtttcagtcactgtcaaagcctttatgacagctgacctc
cctaatgaattgattgaactgctggagaagattgttctggataattctgtcttcagtgaa
cacaggaatctccagaatctgctcatcctgactgccatcaaggcagatcaaacacgggtc
atggagtatatcagccgcctggacaactatgatgctgcagacatcgcaagcattgccatc
agtagtgtgctgtatgaggaggccttcaccatcttctacaagtttggtgtgaatgcctca
gcgatccaggttctgattgagaatattggaaacctagaccgagcatatgagtttgcagaa
aaatgcaatgagcctgctgtgtggagtcagctggcccaagcacagcttcagaaggacttg
gtgaaggaagccatcgactcctacatcagagcagatgaccctacctcttacctggaagtt
gttcaggccgccaccaagagcaacaactgggaggatctagtgaaattcctgcagatggct
aggaaaaacagccgtgcatcctatatagagactgaacttatttttgcattggctaaaacc
agccatctgtccgagctggaagattgcattaatgcacccaacaatgccaacatccagcag
gttggagaccgctgttatgaggaagggatgtatgaggctgccaaactgctatataacaat
atttctaactttgcccgtctggcttccactttggtccacctaggtgagtatcaggcagca
gtggacagcagccacaaggccaacaacactgagacatggaaagaggtatgctttgcctgt
gtggatgggcaagagttccgccttgcacagctgtgtagccttcacatcatcattcatgca
gatgagctagaggagttaatatactattaccaggatcgaggatactttgaggagctcatg
tccctactagaagcagccctgggcctggagagggcccacatgggcatgttcactgagctg
gccattttgtactccaaattcaagcctcagaagatgccagagcacctggagctcttctgg
tcccgtgtcaacatcccaaaggtgctgaaggccgcagagcaggcacatctctgggcagag
ctggtgttcctctatgacaagtatgaggaatatgacaatgctgttctcaccatgatgagt
caccccattgaatcttggaaagaaggtcagttcaaggacttcattgccaaggttgccaac
attgagctctattataaagccctacagttctatttggactataagcctctgctcattaat
gacctgctgttggtgctctcaccccggctggaccatacccggacagtcagttttttttca
aaggcaggccagttgcccctagtgaagccttacctgtgttcagttcagaaccacaacaac
aaaaatgtgaatgaagcactcaaccatctgctgactgaagaggaagattatcagggcttg
agagcatctatcgatgcctatgacaactttgacaacatcagcctggctcaacggctagag
aagcaccagatgatcgaatttaggcgcatcgcagcctatctttacaagtgcaacaatcgg
tgggcccagagtgtggaactctgcaagaaggaccatctctataaggatgccatgcagcat
gcctcagagtcacgtgatcctgagctagctgagaagttactacagtggttcctggaggaa
ggaaagtgggagtgttttgcagcctctctcttcacctgctatgatctgcttcacccagat
gtggtgctcgagctagcctggagacataacctcatggattttgctatgccttacttcatt
caggtgatgagagagtaccttaacaaagtggacaaactggatgccttggagagtctgcac
aagcataaggagcatgtgggggagcctgccccacttgtgtttggccagcagctgacgctg
acagtgagctctgctggcttcccctatggatatgcagctgctcctgccttcacccagcct
cctgtgtttggcttcagtgtgtag
DBGET
integrated database retrieval system
