KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956801
Entry
101956801         CDS       T10664                                 
Symbol
Cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X3
  KO
K04855  voltage-dependent calcium channel T type alpha-1H
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010  MAPK signaling pathway
iti04020  Calcium signaling pathway
iti04713  Circadian entrainment
iti04925  Aldosterone synthesis and secretion
iti04927  Cortisol synthesis and secretion
iti04929  GnRH secretion
iti04934  Cushing syndrome
Brite
Ion channels [BR:iti04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   101956801 (Cacna1h)
SSDB
Other DBs
NCBI-GeneID: 101956801
NCBI-ProteinID: XP_013219458
LinkDB
Position
Unknown
AA seq 2291 aa
MGVQGMPGWPAGGQGGYSLHVLLNASTWFEHVSMLVIMLNCVTLGMFRPCEDLECRSERC
SILEAFDDFIFAFFAVEMVIKMVALGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNV
SLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWA
GLLRNRCFLDSTFVRNNNLTFLRPYYQTEEGEENPFICSSRRDNGMQKCSHIPGRRELRM
QCTLGWEAYVQPQAAGASHNACINWNQYYNVCRSGDLNPHNGAINFDNIGYAWIAIFQVI
TLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMRE
QRARYLSNDSTLASFSEPGSCYEELLKYVGHVIRKVKRRGLRLYARWQSRWRKKVDPSSS
LQGQGQGPGQRQRRAGRCTASVHHLVYHHHHHHHHHYHFSHGSPRRPTPEPGTRDTRLVP
AGTPRSPPSLGHRPPDSESVHSIYHAGCHVEGPQERARVAHTAATTAASLKLASGLGTMN
YPTILPSGLVGNKSSTSPGPKGQRAVPPRTMGHSPLSLGSPGPYEKMQHVVGEHGLGRAS
SRLSGLSVPCPLPSPQAGTLTCELKNCPYCASALEDPELEFSGSESGDSDAHGVYEFTQD
VQRSDRRDPMQPPPAADTPGQGGVQCRPQRQPAPGGPGWPGRLWASFSGKLRRIVESKYF
NRGIMVAILVNTLSMGVEYHEQPEELTNALEISNIVFTSMFALEMLLKLLACGPLGYIRN
PYNIFDGIIVVISVWEIVGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNV
ATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQED
WNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDATRSDSDEDKTS
THFEEDLDKFRVLPASEMKMSSLVVTPNGHLEGRGSLPPPLIMHTAATPIPTPKSSPHLD
VAHGLLDSRRGSSSSVDPQQGDQKSLASLRSSPCAHWGPSSAWSSRRSSWSSLGRAPSLK
HRGQRGERESLLSGDGKGSTDDEAEDGRPGTSSRPGSSPGPQASPLRRAESLDHRSTLDL
QSPRPATLLPAKFHDCNGQTVALPSEFFLRIDSHKEDTVELDDDVEDSCCFRLHKVLEPY
TPQWCRSRESWALYLFSPQNRLRACCQKVIAHRMFDHVVLVFIFLNCITIALERPDIDPG
STERAFLSVSNYIFTAIFVVEMMVKVVALGLLWGERAYLQSSWNVLDGLLVLVSLVDIVV
AMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFF
IIFGILGVQLFKGKFYYCEGADTRNISTKAECRAAHYRWVRRKYNFDNLGQALMSLFVLS
SKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKC
RQHQEAEEARRREEKRQRRLERRRRKAQRRPYYADYSQARRSIHSLCTSHYLDLFITFVI
GLNVITMSMEHYDQPKSLDEALKYCNYVFTIVFVIEAVLKLVAFGFRRFFKDRWNQLDLA
IVLLSIMGIALEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALP
QVGNLGLLFMLLFFIYAALGVELFGRLECTEDNPCEGLSRHATFANFGMAFLTLFRVSTG
DNWNGIMKDTLRECAREDKHCLGYLPALSPLYFVTFVLVAQFVLVNVVVAVLMKHLEESN
KEAREDAEMDAELELEMSQGPPAHPSPPESPDTGPDGPTLLAVRKVSVSRTLSLPNDSCM
FRPVAPATAPHPHPLQEARMETYAGSTPSGLVTSAHSPSLEPSASLQVPSATSPPARGSD
PQCTLSPHGAPHSPSLGRLLCRQEAMRRESLEEQADGRGDSAPESTESFEKSPARQDSLG
GPPRSPPCSPRPASIRTRKHMFGQHCISSRLPAPSGDEAEASDPADEEVSHITSSAQPWP
LASTHSLAASPVTSPVARGVAGSAQDLRRFCSVDTQGFLDKPGRVDMQRWPSMELGSGDS
HLDPREVKAWVPELEPALGSRRKKKMSPPCISVDPPMEDESSTRPPAAEGGSSTLRRRTP
SCEAALHRDCLEPTEGPGAGGDPAAKAERWGQACRAEHLTVPSFAFEPLDVGGPSGDPLL
DSDHSGTPEPTASFSGATTSLEPHETEPPSPSGDVPQKDQGLYLTVPQNPLKKAGLLPAT
PALGDSADGSV
NT seq 6876 nt   +upstreamnt  +downstreamnt
atgggggtccagggtatgccaggctggcctgccggtgggcaggggggctattcactgcac
gtgctccttaacgccagcacgtggttcgagcacgtcagcatgctggtcatcatgctcaac
tgtgtgaccctgggcatgttccggccctgcgaagacctggagtgccgctccgagcgctgc
agcatcctggaggccttcgatgacttcatcttcgccttcttcgctgtggagatggtgatc
aagatggtggccctggggctctttgggcagaagtgctacctgggtgacacgtggaacagg
ctggacttcttcattgtcatggcaggtatgatggagtactccctggacggacacaacgtg
agcctctctgccatccgcacagtgcgcgtgctgcggcccctccgcgccatcaaccgcgtg
cccagcatgagaatcctggtcaccctgctgctggacacgctgcccatgctcgggaatgtc
ctcctgctctgcttcttcgtcttcttcatctttggcattgttggtgtccagctctgggct
ggcctgctgcggaaccgctgcttcctggacagcaccttcgtcaggaacaacaacctgacc
ttcctacggccgtactaccagacggaggagggcgaggagaacccctttatctgctcctca
cgccgtgacaacggcatgcagaagtgctcccacattcccggccgccgggagctgcgcatg
cagtgcacattgggctgggaggcctacgtgcagccccaggctgcgggggccagccataac
gcctgcatcaactggaaccagtactacaatgtgtgccgctcaggggacctcaacccccac
aacggcgccatcaacttcgacaacatcggctacgcttggatagccattttccaggtgatc
acgctggagggctgggtggacatcatgtactacgtcatggacgcccactccttctacaac
ttcatctacttcatcctgctcatcatcgtgggctccttcttcatgatcaacctgtgcctg
gtggtgatcgccacgcagttctcggagaccaagcagcgggagaaccagctgatgcgtgag
cagcgtgcccgctacctgtccaatgacagcacattggccagcttctcagagccaggcagc
tgctacgaggagctgctcaagtatgtgggccacgtcatccgcaaggtcaagcgccgcggc
ttgcgcctctatgcacgctggcagagccgttggcgcaaaaaggtggaccccagcagcagc
ctgcagggccagggccagggccccgggcagcggcagcgccgggcaggcaggtgcacagcc
tccgtgcaccacctggtataccaccaccaccaccaccaccaccaccactatcacttcagc
catggcagcccgcgcaggcccactcctgaaccaggcacccgcgacactaggctggtgccc
gccggcacgccacgctcgccgccctccctgggccataggccgcctgactccgagtctgtg
cacagcatctaccacgccggctgccatgtggaggggccgcaggagagggcccgggtcgca
cacactgcagctaccactgccgccagcctcaagctggcctcggggctgggcaccatgaac
taccctactatcctgccctcaggcctggttggcaacaaaagcagcaccagccccgggccc
aagggccagcgggccgtgcccccaaggaccatggggcacagccccttgagcctaggcagc
cctggcccctatgagaagatgcagcacgtggttggggaacatggactgggccgggcttct
agccgcctgtcaggcctgagtgtgccctgccctctgcccagcccccaggcgggcacactc
acctgtgaacttaagaactgcccgtactgtgccagcgccctggaggaccctgagcttgag
ttcagtggttccgagagcggggattcagatgcccatggggtctacgagttcacacaggac
gtgcaacgcagcgaccgccgtgatcccatgcagccacccccagcagcagacacaccaggc
cagggcggtgtgcagtgccggccacagcggcaaccagcccccggcgggccaggctggcca
ggccgtctctgggcctccttcagtggcaagctacgccgcatcgtagagagcaagtacttt
aaccgtggcatcatggtggccatcctggtcaacacactgagcatgggcgtcgagtaccat
gagcagccagaggagctgaccaatgctctggagatcagcaacattgtgttcaccagcatg
tttgccttggaaatgctgctgaagctgctggcctgtggcccactgggctacatccggaac
ccctacaacatctttgatggcatcatcgtggtcatcagcgtctgggagatcgtggggcag
gcggatggaggcctgtcagtgctgcgcaccttccggcttctgcgggtgctgaagctagtg
cgcttcctgccggcgctgcggcggcagctcgtggtgctcatgaagaccatggacaatgtg
gccaccttctgcatgctgctcatgctcttcatcttcatcttcagcatcctgggcatgcac
ctctttggctgcaagttcagcctgaagacagacacaggagacactgtccccgacagaaag
aactttgactccctgctttgggccatcgtcactgtgttccagatcctgacgcaggaggac
tggaatgtggtgctgtacaatggcatggcctctacttcctcatgggccgccctctacttc
gtggccctgatgaccttcggcaactacgtgctcttcaacctgctggtggccatcctggtg
gagggcttccaggcagagggtgatgccaccagatccgactctgatgaggacaagacatcc
acccactttgaggaggatctcgacaagtttagggtcctgccagcctcagaaatgaagatg
tcatcgctggtggtgacccccaacgggcacctggagggccgggggagcctgccccctccc
ctcatcatgcatacggcagccacgcctattcccactcccaagagctctccacacctggac
gtggcccacggcctcctggactcacgccgtgggagcagcagctctgtggacccccagcag
ggggaccagaagtctctggccagccttcgcagctcaccctgcgcccactggggccccagc
agcgcctggagcagccggcgctcaagctggagcagcctgggccgcgcacccagcctcaag
caccgcggccagcgcggggagcgcgaatcgctgctgtctggcgacggaaagggcagcacg
gacgatgaggccgaggatggcaggccagggaccagctccaggccagggtcctcacccggg
ccccaagccagcccactgcggcgcgccgaatccctggaccaccgcagcacactggacctg
cagtccccgcggcctgccaccctcctgcctgccaagttccacgactgtaatgggcagaca
gtggccctgcccagtgaattcttcctgcgcattgacagtcacaaggaggacacagttgag
ctggatgacgatgtggaagacagctgctgcttccgcctgcacaaggtgctggagccctac
acgccccagtggtgccgcagccgcgagtcctgggccctctacctcttctccccgcagaac
aggctgcgtgcctgctgccagaaggtcattgcgcaccggatgtttgaccacgtggtcctc
gtcttcatcttcctcaactgcatcaccatcgccctggagaggccagacatcgaccccggg
agcaccgaacgggccttcctcagcgtctccaactacatcttcacagccatcttcgtggtg
gaaatgatggtgaaggtggtagccctgggcctgctgtggggcgagcgtgcctacctgcag
agcagttggaacgtgctggatgggttgctggtcctggtgtccctggtggacatcgttgtg
gccatggcctccgctggtggcgccaagatcctgggcattctgcgcgtgctgcgcctgttg
cggaccctgcgacctctgagggtcatcagccgggctccaggcctcaagctggtggtggag
acgctgatctcatcgctcaggcccatcgggaacatcgtactcatctgctgcgccttcttc
atcatcttcggcatcctgggggtgcagctcttcaaggggaagttctactactgcgagggt
gccgacaccaggaacatctccaccaaggctgagtgccgggctgcccactaccgctgggtg
cggcgcaagtacaacttcgacaacttaggccaggcgctgatgtcactgttcgtgctatcg
tccaaggacggctgggtgaacatcatgtacgacggactagacgctgtgggcatcgaccag
cagcccgtgcagaaccacaacccctggatgctgctgtacttcatctccttcctgctcatc
gtcagcttctttgtgctcaacatgttcgtgggtgtggtggtagagaacttccacaagtgc
cggcagcaccaggaggctgaggaggcgcgccggcgggaggagaagcggcaacggcggctg
gagaggcggcgcaggaaggcccagcgccggccctactacgccgactactcccaggcacgc
cgctccatccactctctgtgcaccagccactacctggacctcttcatcacctttgtcatt
ggcctcaacgtcatcactatgtccatggagcactatgaccagcccaagtcgctggacgag
gccctcaagtattgcaactacgtgttcaccattgtctttgtcattgaggctgtgctgaag
ctggtggcctttgggttccggcggttcttcaaggacaggtggaaccagctggacctggcc
atcgtcctgctgtccatcatgggcattgccctggaggagattgaaatgaatgccgcatta
cccatcaaccccaccatcatccgcatcatgcgtgtgctccgtatcgcccgtgtgctgaag
ctgctgaagatggccacaggcatgcgggccctgctggacactgtggttcaagccctgccc
caggtagggaaccttggccttcttttcatgctcctgttttttatctatgctgccctggga
gtggagctgtttgggaggctagagtgcactgaggacaacccctgcgagggcctgagtagg
cacgccacctttgccaactttggcatggctttcctcacgctgttccgtgtgtccaccggg
gacaactggaatgggatcatgaaggacacactgcgggagtgtgcgcgtgaggacaagcac
tgcctaggctacctgcccgcactgtcgcccctgtacttcgtcaccttcgtgctggtggcc
cagttcgtgctggtcaatgtggtggtggccgtgctcatgaagcacctggaggagagcaac
aaggaggcccgcgaggacgcggagatggatgccgagcttgagctggagatgtcgcagggg
ccccctgcccatccctcacccccagaaagcccagacacaggcccagatggccccaccctc
ttggccgtgcgcaaggtgtctgtgtccaggacactctcactgcccaacgacagctgcatg
ttccggcccgtggcacccgccacggccccccacccgcaccccctgcaggaggccaggatg
gagacctacgcgggcagtaccccctcaggcttggtcacctccgctcactcgccgtccctg
gagccttctgcctccctgcaggtcccatcagccacatccccacctgccaggggcagcgac
cctcagtgtaccctgtccccccatggtgcaccccactcccccagcctcggtcggctgctc
tgcagacaggaggccatgcgcagagagtcgctggaagagcaggctgatggccgtggggac
agtgccccggaatccacagagtcttttgagaagagcccagccaggcaggactccctgggg
ggccccccacgctccccaccctgctccccacggcctgccagcattcgcacccgcaagcac
atgttcggacagcactgcatctccagccggctgccggcccctagtggagacgaggctgaa
gcctcagacccagctgacgaggaggtcagccacatcaccagctctgcccagccctggccc
ttggcctcaactcacagccttgcagcctccccggtgacctcccctgtggcccgaggggtg
gcaggcagcgcacaggacctacgcaggttctgcagtgtggacacccagggtttcctagac
aagccaggccgggtggacatgcagaggtggccctccatggagctgggcagcggggacagc
cacctggatccaagggaggtcaaggcctgggtccctgagctcgagccagccctggggtca
cgcaggaagaagaagatgagccccccctgcatttctgtggaccccccaatggaggacgag
agctctacccggccccctgcagcagaaggtggcagcagcaccctgcggcgcaggacccca
tcctgcgaggctgccctgcacagggactgcctggagcccaccgagggcccaggtgcagga
ggggaccctgcagccaaggcggagcgttggggccaggcctgccgagcagagcatctaact
gtgcccagctttgcctttgagccactggatgtggggggccccagtggagaccctttgctg
gacagtgaccacagtgggaccccagaacccacagcttccttctcgggggccacaacatct
ctagaaccccatgaaacagagccaccctcgccctccggagatgtcccacagaaggaccag
ggactatacctcacggttccccaaaacccgctaaagaaggcagggttgctcccagctacc
cctgccctgggtgacagtgcagatggatctgtgtag

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