Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956816
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Entry
101956816 CDS
T10664
Symbol
Pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X2
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iti03016
]
101956816 (Pus7)
Enzymes [BR:
iti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
101956816 (Pus7)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101956816 (Pus7)
Prokaryotic type
101956816 (Pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
101956816
NCBI-ProteinID:
XP_005319519
UniProt:
I3N101
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MEMTEMTGMSLKRGCLSMEDDDSAAPTEEIKKQKVSECCLTKRPDGLQNDCLPNRENVPG
PPEPVSAKRGKMTSDDQLEEEEEEEEDGLSEEGEEEEEAESFADMMKHGLTELDVGITKF
VSSHQGFSGILKERYSDFVVHEIGKDGQISHLDDLSVPVDEEDPSEDVFTILTAEEKQQL
EELQLFKNKETSVAIEVIEDTKEKRTIIHQAIKSLFPGLETKTEDREGRKYIVAYHAAGK
KALANPRKHSWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAIT
VQEIAVLKITAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNITGTDDQV
QQAMNSLKEIGFINYYGMQRFGTTAVPTYQVGRAILQNSWTEVMDLILKPRSGAEKGYLV
KCREEWAKTKDPAAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSY
QSYVWNNMVSKRIEDYGLKPVPGDLVLKGATATYIEEEDVDNYSIHDVVMPLPGFDIIYP
KHKISEAYREMLTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLF
NTDVDNLEGKPPPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQMNTTW
LR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgacagaaatgactggcatgtctctgaaacgtgggtgcctttctatggaagat
gatgacagtgcggccccaactgaagagataaaaaaacagaaggtctctgaatgctgtctg
accaaaagaccagatgggctgcagaatgactgcttacccaatagagaaaatgtgcctggg
ccaccagaacctgtaagtgccaagagaggcaaaatgacttctgatgatcagttggaggaa
gaggaagaagaggaggaagatggcctttcagaggagggggaggaggaagaggaagcagag
agttttgcagacatgatgaaacatggacttactgaacttgatgtaggcatcactaagttt
gtaagttctcatcaaggattctcgggaattttaaaagaaagatactccgactttgttgtt
catgaaatcggaaaagatggacagatcagccatttggatgacttgtctgttccggtggat
gaggaggatccttcagaagatgtatttacaattttgacagctgaagaaaagcagcaactg
gaagagctccagctttttaaaaataaggaaaccagtgttgccattgaggttattgaggac
accaaagaaaaaagaacaatcatccatcaagctattaagtctctgtttccaggattagag
acaaaaacagaggatagagaagggaggaaatatattgtagcctaccacgcagctggaaaa
aaggctttggcaaatccaagaaaacattcttggccaaaatctaggggaagttactgccac
tttgttctgtataaggaaaacaaagataccatggatgctattaatgtactatccaaatat
ttaagagtgaagccaaacatcttctcttatatgggaaccaaagataaaagggctataacg
gttcaagaaattgctgttcttaaaataactgcacaaagacttgcccacctgaataaatgc
ttgatgaactttaagctaggaaatttcagctatcagaaaaaccctctgaaattgggagag
cttcaagggaatcacttcactgttgttctcagaaatataacaggaactgatgaccaagta
caacaagctatgaactctctcaaggagattggatttattaactactatggaatgcaaaga
tttggaactacagctgtccctacatatcaagttgggagagctattttacaaaattcctgg
acagaagtcatggatttaatactgaaaccccgttctggagctgaaaaggggtacttggtg
aaatgcagggaagaatgggcgaagaccaaggacccagctgctgccctcagaaaactacct
gtcaaaaggtgtgtggaagggcagctgcttcgaggactttcaaaatatggaatgaagaat
atagtctctgcatttggcataataccaagaaataatcgtttaatgtatattcatagctat
cagagctatgtgtggaataatatggtgagcaagagaatagaagattatgggctgaaacct
gttccaggggaccttgttcttaaaggagccacagccacctatattgaagaagaagatgtt
gacaattactccattcatgatgtggtaatgcccttgcctggttttgatattatctaccca
aagcataaaattagcgaagcctacagggaaatgctcacagcagacaatcttgatattgac
aacatgagacacaaaatacgtgattactccttatcaggggcttaccgaaagatcattatt
cgtcctcaaaatgtcagttgggaagtagttgcatatgatgatccgaaaattccacttttc
aacacagacgtagacaacctagaagggaaaccaccaccagtttttgcttctgaaggcaaa
tacagggctctcaaaatggatttttctctccctccttctacttatgctaccatggctatt
cgagaagtgctaaaaatggataccagcatcaagaaccagacccagatgaatacaacctgg
ctgcgctaa
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