Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956822
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Entry
101956822 CDS
T10664
Name
(RefSeq) interferon regulatory factor 4 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04659
Th17 cell differentiation
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
101956822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101956822
Transcription factors [BR:
iti03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
101956822
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
101956822
NCBI-ProteinID:
XP_013211893
UniProt:
I3NEL6
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MANGPWRKEEERVPISNGPMLRTGGPLRLRDWLVAQIESGLYAGLRWEDPDKTLFRIPWK
HAAKQGYQAQQDAALFRAWAVYKGKHLEGTDKEDPSTWKTRLRCALNKSIDFHEVRERSQ
LDTSHPYKVYRLVSDHTSRPVSKVHASPAKEGTPSSQQRPPGEATGPACRGHQDGSRLAT
EDEDKEQPPRLAQQGSLPPAALLPDPLADHRYQAQDLGHPWSSVPCEDFNRPDYWLHVRL
FYGPALVREATARTAEGCHLSPGTAASSAAAQRLLGPPARLAQVHFPEPPPGARVLRRLL
PHLERGVLLWVAPEGVFAKRLCQGRVYWRGQLAPHRAQPNKLEREHTCQLLDTRRFLEEL
HAHLQDGQPEPEYQIRLCFGEEYPGPPDQPEERLVMAHVEPFFARELLLHARRLRPGTPR
GPQQGILDGLTHL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggccaacggcccctggcggaaagaggaagagagggtcccgatcagcaatggacctatg
ttgagaaccgggggtcccctgcgtctccgcgactggctagtggcacagatcgagagcgga
ctctacgccgggttgcgctgggaagacccggacaagaccctcttccgcatcccctggaag
cacgcagccaagcagggctaccaggcacagcaggacgcagcgctcttcagggcctgggct
gtgtacaagggcaagcacttggagggtactgacaaggaggacccctccacctggaagacg
aggcttcgctgtgccctcaacaagagcatcgacttccacgaggtgcgcgagcgcagccag
ctggacacctcccacccctacaaggtctaccggctggtgtctgaccacacctcccgccca
gtttccaaggtccatgcttctcctgcaaaagagggcactccctcaagtcaacagcgaccc
cctggagaagcaactgggcctgcctgcaggggacatcaggatggctccagattagccaca
gaggatgaggacaaggagcagcccccaaggctggcccagcagggctccttgccaccagcc
gccctcctcccagaccctttggctgaccacaggtaccaggcacaggaccttggacacccc
tggagctcagtgccctgtgaggacttcaacaggcctgattactggctgcacgtgcgtctt
ttctatggcccggcgctggtgcgcgaagccaccgcgcgcaccgcggaggggtgccatctt
agccccgggacagccgcctcctccgccgccgcccagcgcctgctggggccgcccgcacgc
ttggcgcaggttcacttccccgagccgccgccgggcgcccgcgtgctgcggcgcctgctg
ccgcacctcgagcgcggcgtgctgctgtgggtggcgcccgagggcgtgttcgccaagcgt
ctgtgccagggccgcgtgtactggcgcggccagctagccccgcaccgcgcgcagcccaac
aagctggagcgcgagcacacctgccagctgctcgacacgcgccgcttcctcgaagagctg
catgctcacctgcaggatggacagcccgagccggaataccagatccgcctgtgctttggc
gaggagtacccgggtcccccagaccagccggaggagaggctcgtcatggctcacgtggag
ccgttcttcgcccgtgagctgctcctgcacgccaggcgccttcgccctggcacccctcgg
ggaccccagcaaggcatcctggatggcctcacccacctttga
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