Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956870
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Entry
101956870 CDS
T10664
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00061
Fatty acid biosynthesis
iti00071
Fatty acid degradation
iti01100
Metabolic pathways
iti01212
Fatty acid metabolism
iti03320
PPAR signaling pathway
iti04920
Adipocytokine signaling pathway
Module
iti_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101956870
00071 Fatty acid degradation
101956870
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
101956870
03320 PPAR signaling pathway
101956870
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
iti01004
]
101956870
Enzymes [BR:
iti01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
101956870
Lipid biosynthesis proteins [BR:
iti01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
101956870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
101956870
NCBI-ProteinID:
XP_040146957
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MSETQVPAPNPGLFTGPTRLWTTCRDGQVLLRLSKHGPGHETPMTIPELFQESVQRFGSY
PALAWKDGEKWETLNFYQYYQACRKAARALIKLGLQRFHGVGILGFNSVEWFIAALGAVL
AGGLCVGIYATNSADACQYVISHAKVNVLLVENDQQLQKILSIPRSKLATLKAIIQYKPP
LKERSNNLYSWLDFMELGNSIPDTQLDQVIKTQKANQCAVIIYTSGTVGLPKGVMLSHDN
ITWMAGAVVRDLELTATPEHQEVVVSYLPLSHIAAQMMDMWVPIKIGAVIYFAESDALKG
TLVHTLKEIKPTIFLGVPRIWEKMHDTIKDNLAKASSLRKKAFTWAKDTGLKVNTKRMLG
KRDLPLGYHMAKALVYSRVRSSLGLERCRAFLSGAAPLPESTSEFFLSLDIPIGEIYGLS
ESSGPHSMSTHISGLQRSSFLRRGPLLGQMKHFGRPLLTSAGPSEYTAGDAVSEPRFPHS
CPPGSCGKIVSGCENMLVQQNKDGTGEVCMWGRHIFMGYLDREDTTRETIDEDGWLHSGD
LGRVDNQGFLFITGRIKEILITAGGENVAPVPIENLVRERIPIISNAMLVGDRAKFLSIL
LTLKCEMDQASGAPLNRLSSEAINFCRSLGSQADTVTEIVRQQDPLIYEAIQQGIDAVNL
EATSEAQRIHKWVILEKDFSIQGGELGPTTKMKRPFIAQKYKTQIENFYQ
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacgcaagtccccgcccccaaccctgggctgttcacaggtcccaccaggctg
tggaccacctgtcgggatggacaagtcctcctcaggctctcgaaacacgggccaggccac
gagaccccgatgactatccctgagctgtttcaagagtccgtccaacgattcggctcttac
ccggctctcgcgtggaaggatggcgagaaatgggaaactctgaatttctaccagtactac
caggcttgccggaaggccgccagagccttgatcaagctgggcctgcagcggttccacggg
gtcggcatcctgggattcaactcggtcgagtggttcatcgcagctctcggtgccgtcttg
gcagggggcctctgtgttggtatttatgccaccaattctgccgatgcttgtcaatatgtc
atctcgcacgccaaggtgaacgtcctgctggttgaaaacgatcaacagttacagaaaata
ctttcgattccgcgaagcaagctggcgaccctaaaagcgatcatccagtacaagcctcca
ctgaaggagagaagcaacaacctgtactcttggcttgacttcatggaacttggcaacagc
attcctgacacgcagctggaccaggtcatcaagacccagaaagcgaatcagtgtgcggtc
atcatctacacctcggggaccgtcggcctgcccaagggcgtcatgctcagccacgacaac
atcacgtggatggctggagcagtggtgagggacctggagctgacggccacccccgagcat
caggaggtggtggtcagctacctgcccctcagccatattgcagcgcagatgatggacatg
tgggtgcccataaagatcggcgctgtcatttactttgctgaatcagatgcgctcaagggc
acactggtgcacaccctgaaggagataaagcctaccatcttcctgggggtgccccgcatc
tgggagaagatgcacgacaccatcaaggacaacctggccaaggcctccagcttgaggaag
aaggccttcacgtgggcaaaggacacgggcctgaaggtcaacaccaaacggatgctcggg
aaacgcgacctgccgctgggctaccacatggccaaggcgctggtgtacagcagggtccgc
agctccctgggcctggagcgctgccgcgccttcctcagcggggccgcgccgctgcccgag
agcacgtccgagttcttcctgagcctggacatccccataggcgagatctacggcctgagc
gagagctcggggccccactccatgtccacccacatctcgggcctccagcgctccagcttc
ctgaggcgcggacccctgcttggtcagatgaaacactttggcaggcccctgctcacatct
gctgggccctctgagtacactgcgggtgatgctgtctctgagcctcggtttccccactcg
tgtccccctggcagctgtggcaagatcgtgagtgggtgtgagaacatgctggtccagcag
aacaaggacggcactggggaggtctgcatgtggggcaggcacatcttcatgggctacctg
gacagggaggacacgacccgagagaccattgacgaggatggctggctgcactcgggggac
ctgggccgagtggacaaccaggggttcctgtttatcaccggccgcatcaaagaaatcctc
atcactgcgggtggtgaaaacgtggcccccgttcccatcgagaacctggtgagggagagg
atccccatcatcagtaatgccatgctggtgggcgacagagccaagtttctgagcatactg
ctgacgctgaagtgtgagatggatcaggcgagcggagcacccctgaacaggctgagctcg
gaggccatcaacttctgccggagcctgggcagccaggcagacaccgtgaccgagatcgtg
aggcagcaagacccactcatctacgaggccatccagcaaggcatagacgctgtgaacctg
gaagccaccagcgaggcacagcggatccacaagtgggtcatcttggagaaggacttctcc
atccaaggcggagagcttggtccaacaacaaaaatgaagaggccattcatagcccagaaa
tacaaaacacaaatcgagaacttctaccagtaa
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