Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956898
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Entry
101956898 CDS
T10664
Symbol
Cacna1d
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X14
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04010
MAPK signaling pathway
iti04020
Calcium signaling pathway
iti04022
cGMP-PKG signaling pathway
iti04024
cAMP signaling pathway
iti04218
Cellular senescence
iti04260
Cardiac muscle contraction
iti04261
Adrenergic signaling in cardiomyocytes
iti04270
Vascular smooth muscle contraction
iti04530
Tight junction
iti04713
Circadian entrainment
iti04723
Retrograde endocannabinoid signaling
iti04724
Glutamatergic synapse
iti04725
Cholinergic synapse
iti04726
Serotonergic synapse
iti04727
GABAergic synapse
iti04728
Dopaminergic synapse
iti04911
Insulin secretion
iti04912
GnRH signaling pathway
iti04921
Oxytocin signaling pathway
iti04924
Renin secretion
iti04925
Aldosterone synthesis and secretion
iti04927
Cortisol synthesis and secretion
iti04929
GnRH secretion
iti04930
Type II diabetes mellitus
iti04934
Cushing syndrome
iti04935
Growth hormone synthesis, secretion and action
iti04973
Carbohydrate digestion and absorption
iti05010
Alzheimer disease
iti05020
Prion disease
iti05022
Pathways of neurodegeneration - multiple diseases
iti05031
Amphetamine addiction
iti05207
Chemical carcinogenesis - receptor activation
iti05410
Hypertrophic cardiomyopathy
iti05412
Arrhythmogenic right ventricular cardiomyopathy
iti05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101956898 (Cacna1d)
04020 Calcium signaling pathway
101956898 (Cacna1d)
04024 cAMP signaling pathway
101956898 (Cacna1d)
04022 cGMP-PKG signaling pathway
101956898 (Cacna1d)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
101956898 (Cacna1d)
09144 Cellular community - eukaryotes
04530 Tight junction
101956898 (Cacna1d)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
101956898 (Cacna1d)
04929 GnRH secretion
101956898 (Cacna1d)
04912 GnRH signaling pathway
101956898 (Cacna1d)
04921 Oxytocin signaling pathway
101956898 (Cacna1d)
04935 Growth hormone synthesis, secretion and action
101956898 (Cacna1d)
04924 Renin secretion
101956898 (Cacna1d)
04925 Aldosterone synthesis and secretion
101956898 (Cacna1d)
04927 Cortisol synthesis and secretion
101956898 (Cacna1d)
09153 Circulatory system
04260 Cardiac muscle contraction
101956898 (Cacna1d)
04261 Adrenergic signaling in cardiomyocytes
101956898 (Cacna1d)
04270 Vascular smooth muscle contraction
101956898 (Cacna1d)
09154 Digestive system
04973 Carbohydrate digestion and absorption
101956898 (Cacna1d)
09156 Nervous system
04724 Glutamatergic synapse
101956898 (Cacna1d)
04727 GABAergic synapse
101956898 (Cacna1d)
04725 Cholinergic synapse
101956898 (Cacna1d)
04728 Dopaminergic synapse
101956898 (Cacna1d)
04726 Serotonergic synapse
101956898 (Cacna1d)
04723 Retrograde endocannabinoid signaling
101956898 (Cacna1d)
09159 Environmental adaptation
04713 Circadian entrainment
101956898 (Cacna1d)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
101956898 (Cacna1d)
09164 Neurodegenerative disease
05010 Alzheimer disease
101956898 (Cacna1d)
05020 Prion disease
101956898 (Cacna1d)
05022 Pathways of neurodegeneration - multiple diseases
101956898 (Cacna1d)
09165 Substance dependence
05031 Amphetamine addiction
101956898 (Cacna1d)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101956898 (Cacna1d)
05412 Arrhythmogenic right ventricular cardiomyopathy
101956898 (Cacna1d)
05414 Dilated cardiomyopathy
101956898 (Cacna1d)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
101956898 (Cacna1d)
04934 Cushing syndrome
101956898 (Cacna1d)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
iti04040
]
101956898 (Cacna1d)
Ion channels [BR:
iti04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101956898 (Cacna1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101956898
NCBI-ProteinID:
XP_005317261
LinkDB
All DBs
Position
Unknown
AA seq
2179 aa
AA seq
DB search
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTSQPNSSKQTVLSWQAAIDAA
RQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACI
SIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKI
IAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALR
AFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKT
CFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQC
ITMEGWTDVLYWVNDAIGWEWPWVYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVS
GEGETQGCCGSLWCWWKRRGTAKTGPSGCRRWGQAISKSKLSRRWRRWNRFSRRRCRAAV
KSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLALFTCEMLVKMYSLGLQ
AYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLV
ASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQ
ILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAES
LNTAQKEEAEEKERKKIARKESLENKKNNKPEVNQIANSENKVTIDDYREEDEDKDPYPP
CDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCH
KLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTT
FGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKG
LKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFI
LYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGP
VYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYAL
KARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDIL
NMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPTESENVPVP
TATPGNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAML
FFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKL
CDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPH
HLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNS
DGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDE
VTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNTTIALQAGLRTLHDIGPEIRRAISC
DLQDDEPEEIKREEEDVFKRNGALLGNHVNHVNSDRRDSLQQTNTTHRPLHVQRPSIPPA
SDTEKPLFPPAGNSVCHNHHNHNSIGKQVPTSTNANLNNANMSKAAHGKRPSLGNLEHVS
ENGHHSSHKHDREPQRRSSIKRTRYYETYIRSDSGDEQLPTICREEADIHGYFRDPRLGD
PEYFSSEECYEDDSSPTWSRRNYSYYSRCPGSSMDFEWPRGYHPPQGFWEDDDSPVGYDS
RRSPRRRLLPPTPTSHRRSSFNFECLRRQSSQEEVPPSPALPHRAALPLHLMQQQIMAVA
GLDSSKAQKYSPSHSTRSWATPPATPPYRDWTPCYTPLIQVERSESLDQVNGSLPSLHRS
SWYTDEPDISYRTFTPASLTVPSSFRNKNSDKQRSADSLVEAVLISEGLGRYARDPKFVS
ATKHEIADACDLTIDEMESAASTLLNGNVCPRANGDLGPASHRQDYEFQDFGPGYSDEEP
DLGRDEEDLADEMICITTL
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatgatgatgaaaaaaatgcagcatcaacggcagcagcaagcggaccac
gcgaacgaggcaaactatgcaagaggcaccagactccctctttctggtgaaggaccaact
tctcagccgaatagctccaagcaaactgtcctgtcctggcaagctgcaatcgatgctgct
agacaggccaaggctgcccaaactatgagcacctctgcacccccacctgtaggatctctt
tcccaaagaaaacgtcagcaatacgccaagagcaaaaaacagggtaactcgtccaacagc
agaccagcccgagcccttttctgtttatcactgaataaccccatccgaagagcctgcatt
agtatagtggaatggaaaccatttgacatatttatattattggctatttttgccaattgt
gtggccttagctatttacatcccattccctgaagatgattctaactcaacaaatcataac
ttggaaaaagtagaatatgccttcctgattatttttacagtcgagacatttttgaagata
attgcatatggattattgctacatcctaatgcttatgttaggaatggatggaatttactg
gattttgttatagtaatagtaggattgtttagtgtaattttggaacaattaaccaaagaa
acagaaggcgggaaccactctagcggcaaatcaggaggctttgatgtcaaagccctccgt
gccttccgagtgttacgaccacttcgactagtatcaggagtgcccagtttacaagttgtc
ctgaactccattataaaagccatggttcccctccttcacatagcccttttggtattattt
gtaatcataatctatgctattataggattggaactttttattggaaaaatgcacaaaaca
tgtttttttgctgactcagatatcgtagctgaagaggacccagctccatgtgcgttctca
gggaatggacgccagtgtaccgccaatggcacggaatgtaggagtggctgggttggccca
aatggaggcatcaccaattttgataactttgcctttgccatgctcactgtgtttcagtgt
atcaccatggagggctggacagatgtgctgtactgggtaaatgatgcgataggatgggaa
tggccatgggtgtattttgttagtctgatcatccttggctcatttttcgtccttaacctg
gttcttggtgtccttagtggagaattctcaaaggaaagagagaaggctaaagcgcgggga
gatttccagaaactccgggagaaacagcaactggaggaggatctcaagggctacttggat
tggatcacccaggcagaagacatcgatcctgagaatgaagaggagggtggagaggaaggc
aaacgaaataccagcatgcccaccagtgagaccgaatccgtgaacactgagaacgtaagt
ggcgaaggcgagacccagggctgctgtggaagtctctggtgctggtggaaaagaagaggc
acggccaagacggggccctctgggtgccggcggtggggccaagccatctcaaaatccaaa
ctcagccgacgctggcgtcgctggaaccgattcagtcgcagaagatgtagagctgccgtg
aagtctgtcacgttttattggctggttattgtcctggtgtttctcaacacattaaccatt
tcctctgagcactacaatcagccagactggttgacgcagattcaagatatcgctaacaaa
gtcctcctggctctgttcacttgtgagatgttggtaaaaatgtacagcttgggtctccag
gcatattttgtctctctcttcaaccggtttgattgctttgtggtgtgtggcggaattact
gagaccatcttagtggaactggaaatcatgtcccctctggggatctctgtgttccggtgt
gtgcgcctcttgagaatcttcaaagtgaccaggcattggacatctctgagcaacttggtg
gcgtccttgttaaactccatgaagtcaattgcttcattgttgcttctgctctttctcttc
attatcatcttttccttgcttgggatgcagctgtttggaggcaagtttaatttcgatgaa
acacaaaccaagcgaagcaccttcgacaactttccccaagcccttctgacagtatttcag
attctgacaggcgaggactggaatgctgtgatgtacgacggcatcatggcttacggaggc
ccgtcatcctcaggaatgatcgtctgtatctatttcatcatcctcttcatctgtggtaac
tatattctactgaatgtcttcttggccatcgctgttgacaatttggctgatgcggaaagt
ttgaatactgctcagaaagaggaagctgaagaaaaggaaaggaaaaagattgccagaaaa
gagagcctagaaaataaaaagaacaacaaaccagaagtcaaccagatagccaacagtgaa
aacaaggttacaattgatgactatcgagaggaggatgaagacaaggacccttacccaccg
tgcgatgtgccagtaggtgaagaggaagaagaggaggaggaagatgaacctgaggttccc
gctggtccccgtcctcgcagaatctcggagttgaacatgaaggagaaaattgcccccatc
cctgaagggagcgctttcttcattcttagcaagaccaacccgatccgcgtgggctgtcac
aagctcatcaaccaccacatcttcaccaacctcatcctcgtcttcatcatgctgagcagc
gctgctcttgcagctgaggaccccatccgcagccactccttccggaacactattctgggt
tactttgactatgctttcacagccatctttactgttgaaatcctgttaaagatgacgact
tttggagctttcctgcacaaaggagctttctgcaggaactacttcaatttgctggatatg
ctggttgttggagtatctctggtgtcatttgggattcaatccagtgccatctctgtcgtg
aagattctgagggtcttaagggtcctgaggccccttagagcaatcaacagagcaaaaggg
cttaagcatgtggtccagtgcgtctttgtggccatccggacaattggcaacatcatgatc
gtcaccaccctcctccagttcatgtttgcctgcatcggagtgcagttattcaaggggaag
ttctatcgctgcacagatgaagccaaaagtaatcctgaagaatgcaggggactttttatc
ctctacaaggatggggatgtggatagccctgtggtccgtgagaggatctggcaaaatagc
gatttcaactttgacaacgttctttccgctatgatggcgctcttcactgtctccactttt
gagggttggcctgcgttgctgtataaagccattgactcaaatggagagaatgttgggcca
gtctacaactaccgagtggagatctccatcttcttcatcatctatatcatcattgtcgcc
ttcttcatgatgaacatctttgtgggctttgtcatcgtaacatttcaggagcagggagaa
aaagagtataagaactgtgagctggacaaaaatcagcgtcagtgtgttgaatacgccttg
aaagcacgtcccttgcggagatacatccccaaaaacccctaccagtacaagttctggtac
gtggtgaactcttcgcctttcgaatacatgatgtttgtcctcatcatgctcaacacactc
tgcttggccatgcagcactacgagcagtccaagatgttcaatgatgccatggacattctg
aacatggtcttcactggggtgttcactgtcgagatggttttgaaagtcattgcatttaag
cctaaggggtattttagtgacgcctggaatacgtttgactccctcatcgtaatcggcagc
attatagacgtggccctcagcgaagccgacccaactgaaagtgaaaatgtccctgtccca
actgctacacctgggaactctgaagagagcaatagaatctccatcacctttttccgtctt
ttccgagtgatgcgattggtgaagctcctcagcagaggggaaggcatccggacattgctg
tggacttttattaagtcctttcaggcactcccatatgttgccctcctcatcgccatgctg
ttcttcatctacgcagtcattggcatgcagatgttcgggaaagttgccatgagagataat
aaccagatcaataggaacaacaacttccagacgtttccccaggcggtgctgctgctcttc
aggtgtgcaacaggggaggcctggcaggagatcatgctggcctgcctcccggggaagctc
tgtgaccctgagtccgattacaaccctggagaggaatacacgtgtgggagcaactttgcc
attgtttatttcatcagtttttacatgctctgtgcgtttctgatcatcaatctgtttgtg
gctgtcatcatggacaattttgactatctgacacgggactggtctattctggggcctcac
catttagatgaattcaaacgaatatggtcagaatatgaccctgaggcaaagggaaggata
aaacaccttgatgtggtcactctgctccggcgtatccaacctcctctggggtttgggaaa
ttatgtccacacagagtagcgtgcaagagattagtggccatgaacatgcctctcaacagt
gatgggacagtcatgtttaacgcaaccctgtttgctttggtccgaacggctctcaagatc
aagactgaagggaacttggaacaagctaatgaagaacttcgagctgtgataaagaaaata
tggaagaaaaccagcatgaaactgcttgaccaagtggtccctccagccggtgatgatgag
gtaaccgtggggaagttctatgccactttcctgatacaggactactttaggaaattcaag
aaacggaaagaacaaggattggtgggaaagtaccctgcgaagaacaccacaattgcccta
caggcgggattaaggacactgcatgacattgggccagaaatccggcgtgctatatcctgt
gatttacaagatgacgagccggaggaaattaaacgagaagaagaagatgtattcaaaaga
aatggtgccctgcttggaaaccatgtcaatcatgttaatagtgataggagagattccctt
cagcagaccaataccacccaccgtcccctgcatgtccaaaggccttcaattccacctgca
agtgacactgagaaaccgctgtttcctccagcaggaaattcggtgtgtcataaccatcat
aaccataattccataggaaagcaagttcccacctcaacaaatgccaatctcaataatgcc
aatatgtccaaagctgcccatggaaagcggcccagccttgggaaccttgagcatgtatct
gaaaatgggcatcattcctcccacaagcatgaccgggagcctcaaagaaggtccagtatt
aaaagaactcgctattatgaaacttacattaggtctgactcaggagatgagcagctccca
actatttgccgggaagaagcagacatacatggctacttcagggacccccgcttgggggat
cccgagtatttcagcagtgaggagtgttatgaggatgacagctctcccacctggagcagg
cgaaactacagctactacagcaggtgcccaggcagcagtatggacttcgagtggccccga
ggctaccaccctccccagggcttctgggaggacgatgactcccctgttggctatgactca
cggagatctccccggagacgcctgctacctcccaccccaacatctcaccggagatcctcc
ttcaactttgagtgcctgcgccggcagagcagccaggaggaggtcccaccgtcacctgcc
ctgccacaccgagcggccctgcctctgcacctgatgcagcagcagatcatggcagttgca
ggcctggattcgagtaaagcccagaagtactcaccaagccactcaacccggtcatgggcc
acccctccagcaacccctccataccgggactggacaccgtgctacacccccctgatccag
gtggaaaggtcagagtccctggaccaggtcaatggcagcctgccatccctgcaccgcagc
tcctggtacacagatgagcctgacatctcctataggacattcacaccagccagcctgact
gtccccagcagctttcggaacaaaaacagtgacaagcagaggagcgcagacagcttggtg
gaggcagtcctgatatctgaaggcttaggacgctacgcaagagatccaaaatttgtgtcg
gctacaaaacatgaaatcgccgatgcttgtgacttaaccattgatgagatggaaagtgca
gccagcaccctgctcaacgggaacgtgtgtcctcgggccaatggggatctgggtcctgcc
tcacaccggcaggactatgagttccaggacttcggtccaggctatagtgacgaagagcca
gaccttggacgagatgaggaagacctggcagatgagatgatctgcatcaccaccttgtag
DBGET
integrated database retrieval system
