Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101956943
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Entry
101956943 CDS
T10664
Name
(RefSeq) helicase SRCAP isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101956943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101956943
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
101956943
SWR1 complex
101956943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
101956943
NCBI-ProteinID:
XP_013213344
UniProt:
I3MU82
LinkDB
All DBs
Position
Unknown
AA seq
3237 aa
AA seq
DB search
MQSSPSSAHPQLPVLHTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP
PGPPDSATVPLEGLSLPQAADLANRGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPLASSKAGSSPCLGSSSAASSPPPAASRLDDEDGDFQPQEEEEEDDE
ETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGGPSSPFQTPSSHDSD
TRDGPEESVEEEPSQVLEVKPPPSSVTQRNKQPWHPDEDDEEFTANEDEAEDEEDTIAAE
EQLEGDVDHAMELSELAREGELSMEELLQQYAGAYASDASAVGSGSSEEEDEDEDVEANS
SDCELEGPTEAEEAPQEDSSSQSDSAEEQSEDEEDEHSEEEETGGSSESEESESDESEDA
GSQSQADQEEEEDDDFGVEYLLARDEEQSEADGGSGPPTPGPTTTLGPKKEITDIAAAAE
SLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQ
TISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGW
TKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLL
LTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKV
LRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSVIN
ILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDLIGLE
GRVSRYEADTFLPRHRLSRRVLLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVVVV
NSPRTPLGPVPVRPPPGPEFSAQPPPGPTPPVLPAPLMMSASPAGPPLVPASRPPGPVLL
PPLQPNSGPLPQVLPSPLGVLSGTSRPPTPTLSLKPAPPAPVRLSPVPPPGSSSLLKPLT
VPPGYTFSPAAATTTSTTTATATTTSVPAPNPAPQRLILSPDMQARLPSGEVVSIGQLAS
LAQRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLIS
QPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPSMVNNTGVVKIV
VRQAPRDGLTPVPPLAPAPRPASSGLQAALTPRPTLSPGRLSTPTLGTARAPIPAPTLVR
PLLKLVHSPSPDVSASAPGAAPMTISSSLHVPSSLPGPASSPMPIPNSSPLASPVPSTVS
VPLSSSLPISVPSTLPTSASTPLTIPISAPLPVSASGPALLTNVTPALAPVVSVSPGPPS
LAPAGASPTASALTLGLATTPALSPPQTPGHPLLLAPTSSHVPGLNSSVAPACSPVLVPA
SALANPFSAAPNPAPAQASLLAPAPSASQALATTLAPMVAPQTAILGPPASSLAPLPVLA
PSQTPVPVMAPTPTPGTPLVSSSLVPAPPSVLASSSTQTMVPAPVPSPLSSLASTQTLAL
APALASTLGGSSPSQTHSLGTGNLQGPFPAQTLSLTPASSLVPTPAQTLPLTPGTPLGST
QTLSLAPASPMGLAPAHTLTLAPATSSAPLLAPASVQTLTLSPAPVPVPTLGPAAAQTLA
LAPASTQAPASQASSLVVSASGAASLPVTMVNRLPVPKDEPDTLTLRSGPPSPPSTATSF
SGPRPRRQPPPPPRSPFYLESLEEKRKRQRSERLERIFQLSEAHGALAPVYGTEVLDFCT
LPQPVASPIGPRSPGPSHPTFWTYTEAAHRAVLFPQQRLDQLSEIIERFIFVMPPVEAPP
PSLHACHPPPWLAPRQAAFQEQLASELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQT
LAALLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNA
DKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLI
SERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEEPSGSSVSSAPE
EEEETVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFLAGEGEEAGR
PGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARKDLD
QAKEEVFRLPQEEEEGPGAGDEISCGTGGGSHRRSKKVKAPERPGTRVSERLRGARAETQ
GANHTPVTSTHHTRNTSTPPRCSPARERVPRPAPRPRPAPASAPAAIPAPVPAPVPAPVP
VPVPVPVPVPVPISAPNPIAILPVHIMPSPPTPPQIPPSCSPACTPPPACTSPPPHTPPP
TQTSLSTPSSPLLLGSPSVPISSPVTNLSLGLGPEAELRVQALASTESLELAGMTSSETS
PLPLVPPKDLLPVSVEIMPVSEKNLPLIPSAPSPTLEADGIPNGQEQGVPSSAEGTILTV
LPDGEELPSGLRESNGLELPPTATCDEPLQEPLEADRNLEELVEEVQTPTSSPEKPQELA
APEVTAPSTSSSATSSPEGPSPARPPRRRTSADVEIRGQGAGRSGQPPGPKVLRKLPGRL
ITVVEEKELVRRRRQQRGTASTLIPGVSETSASPGSPSTRSLSGPESSPPTSGPCEAAPS
FSLPTPTQPPFIARRHIELGMTGGGSPENGEGALLAITPPAVKRRRGRPPKKNRSPADAG
RGVEEAPSSTSKGTTNGADPVPGAETLIVAEPVLEPQLIPGPQPLGPPSIHRPEPIVLSP
VEKRRRGRPPKARDLPIPGTMSSPGDGNLESRTQPLPLPPPLPPPLPLLSCPTATVANTV
TTVTISTSPPKRKRGRPPKNPPSPRPSQLPVLDRDSSSVLESCGLGRRRQAQGLGESEGS
SSDEDGSRPLTRLARLRLEAEGTRGRKSEGSMVVAVIQDDLDLVDSGPGGLELTPPVVSL
APKLRSTRLRPGSLVPPLETEKVPRKRAGAPVGGGPGLAKRSRLQPPSPLGPEGSVEESE
AEASGEEEEGDGTPRRRPGPRRLVGTTNQGDQRILRSSAPPHLSGPTISHRGRKAKT
NT seq
9714 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcccctcctctgctcatcctcagctcccagtcctacatacacagatggtg
tcggacggcatgacaggcagcaatcctgtgtcccctgcctcatctagttccccagcctct
agtggggcaggcggcatctccccccagcacatagctcaagattcctctctggatggacct
ccaggccccccagatagtgccacagtgcccttggaggggctcagtttaccacaggctgct
gacctggctaacaggggcccaaagtgggagaagagccatgctgaaattgcagagcaggcc
aagcatgaagctgaaattgagactcggattgctgagctgcggaaagagggtttctggtca
ctgaagaggttgcctaaggtgccagagccccctcggcccaagggccactgggattacctg
tgtgaggagatgcagtggctctctgccgactttgctcaggagcgccgatggaaacggggt
gtggcccgtaaggtggtgcgcatggtgatccgacaccacgaggagcagcggcagaaagag
gaacgggctcggagggaagaacaggcaaagttgcgccgaattgcttccactatggccaag
gatgtcagacagttctggagtaatgtggaaaaggtggtgcaattcaagcaacagtcccgg
cttgaggaaaagcgcaaaaaagccttggacctccacctggacttcattgtggggcaaact
gaaaagtactcagaccttctgtctcagagcctcaaccaaccactagcctccagcaaagct
ggctcttccccttgccttggctcttcctcagctgcttccagtcctccacccgctgcttca
cggctggatgatgaagatggggacttccagccccaagaggaggaggaggaagatgatgag
gaaaccattgaggttgaagaacaacaggaaggcaatgatgcagagacccagaggcgtgag
attgagctgcttcgacgtgagggagaactgcccctggaagagctgctccgttctctcccc
cctcaactgttgggagggccttctagcccctttcaaaccccttcctctcatgatagtgac
acacgagatgggcctgaagaaagtgttgaagaagaaccttctcaggtgttggaggtgaag
cccccaccttcctctgtcacacagcgcaacaaacaaccttggcatccagatgaagatgat
gaagagtttactgccaatgaagatgaagcggaggatgaagaggatactatagcagctgag
gagcagttggaaggggatgtggatcatgccatggaactgagcgagttggctcgagaaggt
gagctatctatggaggaactgttgcagcagtatgcaggagcctatgcctctgatgcctct
gctgtaggctctgggagtagtgaagaagaagatgaagatgaggatgttgaggctaatagc
tctgattgtgaactagagggtcccacagaagctgaagaagctcctcaagaggatagtagc
agtcagtcagactctgctgaggagcagagtgaggatgaggaagatgagcattcagaggaa
gaagagacaggtgggagttcagaatcggaggaatctgaatctgatgagtctgaagatgct
ggatcacaaagccaagcagatcaagaggaggaggaagatgatgattttggggttgagtac
ttgcttgcccgtgatgaagagcagagtgaggcagatggaggcagtgggcctcctaccccg
gggcccactaccactctgggccctaagaaagaaattactgacattgctgcagcagctgaa
agtctacagcccaagggttacaccttggccactacccaggtaaagacacctattcccctg
ctcctacggggccaactccgggagtaccaacacattgggcttgactggttggttactatg
tatgagaagaagcttaatggcattcttgcagatgagatgggactggggaagacaatccag
accatctccctgcttgcccacttggcctgtgaaaaaggtaactggggtccccacttaatc
attgttcctaccagcgtgatgttgaactgggagatggagttgaaacgttggtgccccagc
tttaaaatccttacttactatggagcccaaaaagagaggaagcttaagcggcagggctgg
accaagcccaatgccttccatgtgtgtatcacatcttacaagctggtgctgcaggaccac
caggccttccgccgcaagaactggcgctatctcattctggatgaagctcaaaacatcaag
aacttcaagtcccaacgctggcagtcattgctgaattttaatagccagaggcgcctgctc
cttacaggaactcccttgcagaatagtctcatggagctgtggtccttgatgcactttttg
atgccccatgtcttccagtctcatcgtgaattcaaggaatggttctctaaccccctaact
ggcatgattgagggcagccaagagtataatgaaggattagtcaaacgcctccacaaggtt
ttacgacctttcttgctgcgccgagttaaggtggatgtcgagaagcagatgcccaaaaag
tatgagcatgttatccgctgccgactctccaagcgtcagcgctgtctttatgatgacttc
atggcacagaccacaactaaggagacactagccacaggccatttcatgagcgtcatcaac
attttgatgcagctgcgaaaagtctgcaatcatccaaatctatttgaccctcgacctgtt
acctctcccttcatcaccccaggtatctgcttcagcaccgcctctctggtgctaagggcc
actgatgtccaccccctccagcggatagatatgggtcggtttgaccttattggcctggag
ggtcgtgtttctcgatatgaagctgatacatttctgccccggcaccgcctctctcgacga
gtactgctagaggtggccactgctcctgaccctcctccccggcccaagccagtcaagatg
aaggtcaacaggatgctgcagccagtgcccaagcaagaaggccgcacggtggtggtggtg
aacagcccacggacgccccttggccctgtcccagtccgaccccctccaggccctgagttc
tcagcccagcctccccctggcccaacccccccagtactgccagcaccactgatgatgtca
gcctcacctgctggacccccgcttgttcctgcatcccgaccccctggacctgttcttttg
cctcccctgcagccaaacagtggtcctctcccccaggttttgccatcccccttgggagtc
ctgagtgggacctcacggcctcccacaccaaccctgtccctgaagccggccccacctgcc
ccagttcgtctgagccccgtcccacccccaggctcctccagcctgttgaagccccttaca
gtgccgccaggctataccttctctcctgctgctgcaacaaccacctctaccactacggcg
actgctactaccacatcagtgccagctccaaatcctgcaccacagcgcctgatcctgtct
cctgatatgcaggcccgtctgccctcaggtgaagttgtcagcattgggcagttggcttca
ctggcacaacgtccagtggcaagtgctgggggaagcaaacctctcaccttccaaatccag
ggcaacaagctcactttgactggtgcccaggtgcgccagcttgctgtggggcagccccgc
ccgctgcaaaggaatgtggtgcacttggtgtcagcaggggggcagcaccacctcatcagc
cagcctgcccatgtggccctcatccaggccgtggccccgacccctggccccacccctgtc
tctgtgctgccttcttcgacccccagcaccacccctgcccccactggcctcagccttccg
cttgctgctaaccaggtgccaccatccatggtgaataacacaggcgtggtgaagatcgta
gtgagacaggcccctagggatggactgactccagttccaccactggcaccagcacccagg
cctgcgagttctgggcttcaagctgcattgactccacgccccacattaagccctggtcgg
ctatccacacctaccctgggtactgcccgggcccccatacctgcgcccactctggtgagg
ccccttctcaagctggtccacagtccttcacctgatgtcagtgcttcagcacccggagct
gctcccatgaccatctcttcttctctccatgtgccatcctcacttcctgggccagcctct
tctccaatgccaattcccaactcctctcccctagctagtcctgtgccctctacagtttca
gttccactgtcatcttcactccccatctctgttccttccacacttcccacctcagcctca
actccattaaccatccccatttcagcccccttgcctgtttcggcttcaggcccagctctc
ctgaccaatgtgactccagcactggcacccgttgtttcagtgtctcctggacctccctct
ttggcaccagctggggcttccccaacagcatcagccttgactctaggtttggctacaact
ccagccctgtccccacctcagacacctggtcaccctttgttgttggctcccacctcttca
catgttccagggttaaactcatccgtggccccagcatgttcccctgtcctggtgccagct
tcagctctggccaatcccttttcggctgcgccaaatccagctcctgctcaggcttccctt
ctggctccagcaccttctgcatctcaggctttagccaccactctggctcctatggtggct
ccacagacagcaatcctgggtcctccagcttcttctctggctcctcttccagtcctggct
ccatcgcagactccagttccagttatggctccaacaccaacgccaggaaccccattagtc
tcatcctcactggtgccagctccaccttctgtgttggcttcatcatcaactcaaactatg
gtaccagcccccgttccatcacctctctcaagcctggcttctacacagacactggctcta
gccccagctttagcatccactctgggtggctcgtctccatctcagacacactctttagga
acagggaaccttcaagggccctttccagcccagacattatcattgactccagcatcatcc
ctggtacctactccagcccagacactgcctttgacaccaggaacaccactgggttcaact
cagacgttgtctctggctccagcttctccgatgggcttggccccagcccacacgctgact
ttggctccagcaacatcatctgctccactcctggccccagcttcagtgcagacactgact
ttgagccctgccccagttcctgtgcccaccctgggtccggctgcagctcagaccctggcg
ctagccccagcctcaacacaggccccagcttcccaggcatcttcccttgtggtttcggca
tctggtgccgcttccttgcctgtcaccatggtaaaccggctgcctgttcccaaggatgag
cctgacacactgacattgcgctctggtccccccagtcctccctccactgctacctcgttc
agtggcccccgacctcgacgtcagcccccaccaccacctcgttcccctttctatctggag
tctctggaggaaaagcggaagcggcagaggtctgaacgcctggaacggattttccaactt
agtgaggctcatggggccctggcacctgtgtatgggactgaagtcctggatttctgtacc
ctgccccaacctgttgccagccccatcggccctcgttctcctggccccagccaccccacc
ttttggacttataccgaggctgcccaccgggctgtactgtttccccagcagcgactagac
cagctgtcagaaatcattgagaggttcatctttgtcatgcctcctgtggaggcacctccc
ccttccctgcatgcctgccacccacctccttggctggctcctcggcaggcagccttccag
gagcaattggccagtgagctctggccccgggctcgtcctttgcaccgtattgtatgtaac
atgcgcacccagttccctgacttgagactcatccagtatgattgcggaaagttgcaaacc
ttggcagcactgttgcggcagctcaaggcagagggccaccgggtactcatcttcacccag
atgacccgaatgctggatgttttagagcagtttctcacctaccatggccacctctacttg
cgtctggatgggtctactagagttgaacagagacaggccttgatggaacggttcaatgca
gacaaacgcatattctgcttcatcctttcgactcgaagtgggggtgtgggcgtgaacctg
acaggagcagacactgttgttttttatgacagcgactggaatcccaccatggatgctcag
gcccaggatcgttgtcatcggattggccagactcgagatgtccacatctatagacttatc
agtgaacggacagtagaagaaaacatcctaaaaaaggcaaatcagaagagaatgttggga
gacatggccattgagggaggcaacttcacaacagcctattttaaacagcagaccatccga
gagctgtttgatatgcctctagaggagccatctggctcatctgtatcctctgcccctgag
gaggaagaggagactgtggccagcaagcaaacccatattctggagcaggcattgtgtcgg
gctgaggatgaagaggatatccgtgctgccacccaggctaaggctgaacaagtggctgaa
cttgcagaatttaatgagaatgatggttttcttgctggtgagggagaggaggctggtcgg
cctggggctgaggatgaggagatgtccagggctgagcaggagattgctgcccttgtagaa
cagctgacccccattgagcgttatgccatgaaatttctggaggcctcgcttgaggaagtg
agccgagaggagcttaagcaggcagaagaacaagtggaagctgcccgcaaagacctggac
caagccaaggaagaggtgtttcgcctaccccaagaagaggaggaggggccaggggctggg
gatgagatttcctgtgggactggtggaggcagccaccggcgcagtaagaaggtcaaggcc
cctgagaggccagggactcgtgtcagtgagcgtcttcgaggagctcgggctgaaactcaa
ggggcaaaccacactcctgtcacatccacccatcatacccgcaatacctccacacccccc
cgctgcagccctgccagggagcgagttcccaggccagcacctaggcctcgacctgctcca
gcttcagctcctgctgcaattcctgccccagtccctgccccagtccctgccccagtccct
gtcccagtccctgtcccagtccctgtcccagtacccatttcagcccctaatccaatagcc
attcttcctgtccatatcatgccttctcccccaactcctccacagattcctccctcttgt
tcccctgcctgtacccctcctcctgcttgcacctctccaccacctcataccccaccaccc
acccaaacctctctctcaactccttcctctcctctcctgcttggttcaccttctgtgccc
atctcttccccggtcaccaacctctctttgggcttggggcctgaggcagaactccgtgta
caagcattagcatctacggagtccctggagctggctggcatgaccagttctgagacctcc
ccgcttcctcttgtaccccctaaggatctgttgccagtttctgttgagatcatgcccgta
tctgagaagaaccttcctctcatcccttctgcacctagcccaaccttggaggctgacggc
atccccaatggtcaagagcagggggtaccatcttctgctgaggggaccatccttacagtg
ctgcctgatggtgaggagttgccctcgggtctgagagagagcaatgggctggagctccca
cctacagcaacatgtgatgagccacttcaggagccactggaggctgacaggaacttggaa
gagctggtagaagaagttcagaccccaacctcaagcccagagaagccacaagaacttgct
gcacctgaggtcacagccccatcaacctcatcttcagccacttcctctcctgagggtcct
tcacctgcccggccccctcgtcgtcgcaccagtgctgatgtagaaattaggggtcagggg
gctggtcgttcagggcaacctccaggccccaaagtgcttcgcaagctgccaggacggcta
ataactgtggtggaagaaaaggaacttgtgaggcgaaggcgacagcagcggggaactgcc
agcaccctaatacctggggtctctgagactagtgccagcccaggaagcccatctacccgc
agcttgtcagggccagaatcctcacctcccaccagtgggccctgtgaagctgctccctca
ttctcactgcctacaccaacccagccacccttcatagctcgtcgtcacattgagctggga
atgactggtgggggcagcccagagaatggagaaggggcactgcttgctatcactccacct
gctgtgaaacgtcggaggggaaggccccccaagaagaacaggtctccagcagatgctggg
agaggggtggaggaggcaccctcatccacctctaagggaacaaccaatggggctgaccca
gttcctggagctgagaccctaattgttgcggagcctgtcttggagcctcagcttattcct
gggccccagcctcttggacccccatcaattcacagaccagagcccatcgtcctgtcacct
gtggagaaaagaaggcgtgggcggccccctaaggcacgggatttgcccatccctgggact
atgtcctctccaggggatggcaatttagagagccggacacagccactcccactaccacca
ccattgccaccacccctaccacttttatcctgtcccactgctactgtcgccaacactgtc
accaccgtcaccatttcaacatccccacccaagcgaaagcggggccgacctcccaagaat
ccaccatcacctcggcccagccaacttcctgttttggaccgcgacagctcttctgtcctt
gagagctgtggattagggaggcgtcggcaagcccagggcctcggggagagtgagggtagt
tcttctgatgaggatggaagccgcccccttacccgcctggcccgcctgcggctggaagct
gagggaacccggggacggaaaagtgaagggtccatggtggtggctgtaattcaggatgac
ctggatttagtagatagtgggccaggcggattagaattgacacctcctgtggtttcatta
gccccaaaactgcgctcaacccggctgcgtccagggtctctagttcccccactagagact
gagaaggtgcctcgcaaacgggcgggggccccagttggtgggggtcctgggctggcaaag
cggagccgtctacagcctccaagtcccctggggcctgagggttcggtagaagagtctgag
gctgaagcctcaggtgaggaggaagaaggggatgggaccccacggcgccggcctggcccc
cgcaggcttgttgggaccaccaaccaaggggaccagcgcatcctgcgcagcagtgcccct
ccccacctgtctggccctaccattagtcacagaggccgaaaggccaagacgtga
DBGET
integrated database retrieval system
