Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957027
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Entry
101957027 CDS
T10664
Symbol
Wdr7
Name
(RefSeq) WD repeat-containing protein 7 isoform X3
KO
K24738
rabconnectin-3b
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101957027 (Wdr7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101957027 (Wdr7)
Membrane trafficking [BR:
iti04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
101957027 (Wdr7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
WDR72_alpha-sol
PEP5_VPS11_N
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
LRS4
Motif
Other DBs
NCBI-GeneID:
101957027
NCBI-ProteinID:
XP_005323096
UniProt:
I3N587
LinkDB
All DBs
Position
Unknown
AA seq
1490 aa
AA seq
DB search
MAGNSLVLPIVLWGRKAPTHCVSAVLLTDDGATIVTGCHDGQICLWDLSVELEVNPRALL
FGHTAAITCLSKACASSDKQYIVSASASGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGSQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
SVTGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDRKDKELLICPPVTRFFYGCKEYFHKLLIQGDSSGRLNIWNISD
TPDKQEGDEELKMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGR
LVCGREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQIIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNIAHHKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENL
QKASGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEDDEEIMRQRREESDPEY
RASKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSR
GGHMSLMLPGYNQAACKLPHGKAEAGRKLPAMEGVGKGTYGVSRAVTTQHLLSIISLANT
LMSMTNATFIGDHMKKGPTRPPRPSTPDLSKARDSPPTSSNIVQGQIKQVAAPVVSARSD
ADHSGSDSASTPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRC
LEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYMDHVISPGVTAEAMQTITTAPDA
SGSEAKVQEEEHDLVDDDITTGCLSSIPQMKKISTSYEERRKQATAIVLLGVIGAEFGAE
IEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRT
AIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALS
LIATARPPAFITTIAKEVHRHTALAANTQSQQNMHTTALARAKGEILRVIEILIEKMPTD
VVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALY
DIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQ
LRCIKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFMV
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaacagccttgttctacccattgtgctttggggacgcaaagcaccaacacac
tgtgtctcagctgtgcttttaacagatgatggggccacaattgtaactggatgccatgat
ggacaaatatgtctctgggatctttcagtagaattagaagttaatcctcgagcactgtta
tttggtcacacagcagcaatcacttgtttgtctaaagcttgtgcttctagtgacaaacag
tatattgtgagtgcatctgcaagtggagagatgtgcctctgggatgtgaatgatggcaga
tgcattgagtttacaaaattagcctgcacacatactggcatacagttctaccaattctct
gttggaagtcagcgagaaggaagacttttatgccatggacattaccctgaaatccttgtg
gtggatgctaccagcctggaggtgttatactccttagtatcaaagatatcaccagactgg
attagctccatgagtattattcgatcccatcggacacaagaggacactgtggtagcactt
tcagtgacaggcatcttgaaggtgtggatcgtcacctctgaaataagtggcatgcaggat
actgagccaatatttgaggaggaatccaaaccaatttattgtcagaattgtcaaagcatc
tctttttgtgcattcacacaaaggtcacttttggttgtgtgctccaaatattggagggta
tttgatgctggagattattccctgttgtgttcaggtcctagtgaaaatggacagacttgg
actggaggggactttgtatcagcagataaagtaatcatttggactgaaaatgggcaaagt
tatatttacaaactacctgccagttgccttccagctagtgattcattccgcagtgatgtg
gggaaagcagttgaaaatttaattcctcctgttcaacatagcctcttggatcgaaaagat
aaagagctgctaatttgtcctcctgttactcggttcttctatggatgcaaggaatatttc
cataaactattaattcagggtgattcctctggaagattaaatatttggaacatatcagac
actcctgataaacaggaaggtgacgaagagctgaaaatgacaacctctatcagcttgcaa
gaggcctttgataaactgaatccttgtcctgctggaattatagatcagctgagtgtgatt
cctaatagtaatgagcctctgaaagtgactgcaagtgtgtacataccagcacatggacgg
cttgtttgtggccgtgaagatggaagcataattattgtacctgccacacagactgccata
gtacagctgttgcaaggggaacacatgctcagaagaggttggccacctcacagaacactc
cgtggtcatcggaacaaagtcacatgtttgctatatcctcatcaggtctcagctcgatat
gatcaaagatacctgatttctggaggtgtggatttttcggtcataatttgggacatattt
tctggagaaatgaaacatatcttctgtgttcatggtggtgagatcactcaacttctagtt
ccacccgaaaactgtagtgcaagggtgcagcactgtatctgctctgtagccagtgaccac
tcagtaggacttctaagtttgcgagagaaaaaatgcatcatgttggcatctcggcacctt
ttccctattcagataatcaagtggagaccctctgatgattacttggtcgtgggctgttca
gatggctcggtgtatgtctggcaaatggatactggtgctttggatcgttgtgtgatgggg
ataacagcagtagagatactgaatgcttgtgatgaagcagttcctgctgcagtagattca
cttagtcacccagcagtcaacctcaaacaagctatgacaagacgtagtcttgctgccctt
aaaaatatagcccatcacaaactacaaacccttgcaactaacctcttggcttctgaggca
tctgacaaggggaatttacctaaatattctcataactccctgatggttcaagcaataaag
acaaacctcacagacccggacatacacgtgcttttctttgatgtggaagcgttgattatt
caactcctgactgaagaagcctctaggccgaatactgcgcttatttccccagagaatttg
caaaaagcatctggcagttcagacaaagggggctcttttctaactggaaaacgagcagca
gttctcttccaacaagtgaaagaaactatcaaagagaacataaaggaacatctccttgat
gatgaagaggatgatgaagagataatgaggcagagaagggaagaaagtgatcctgagtat
cgggccagcaaatctaagcccttgaccctattagaatataacttaactatggacactgca
aaattgttcatgtcctgccttcatgcctggggtttgaatgaagttctggatgaagtttgt
cttgatcgccttggaatgctgaagccacactgtacagtatcgtttggccttttatcaaga
ggaggtcatatgtcactgatgctgcctggatataatcaagctgcttgtaaactaccacat
gggaaagcagaagcaggaaggaagttgccagcaatggagggagtaggaaaggggacttac
ggagtatcccgagcagtcaccacccaacatctcctgtctatcatatctttggcaaatact
ttaatgagtatgaccaatgcaacttttattggtgaccatatgaagaaaggtcctaccagg
ccacctagaccaagcaccccagacctttctaaggcaagggattctcctccaacttccagt
aatattgtgcaaggacagattaaacaagttgctgcacctgtcgtttccgctcggtctgac
gctgatcactctggctctgactctgcttctactcctgctttacatacctgtttcttagta
aatgaaggatggagtcagttagctgctatgcattgtgttatgctgccagacctgctggga
ttggataagtttaggcctccacttctagagatgctggctcgaagatggcaggatcgttgc
ttggaggtaagagaagctgcccaggccctgcttctagcagagctgaggagaattgagcag
gcaggacgaaaggaagccatcgatgcctgggctccttatttgcctcagtatatggaccac
gtcatatcacctggagtcacagcagaagccatgcagactatcaccactgctccagatgcc
tcagggtcagaagccaaagtccaggaggaagagcatgaccttgtggatgacgacatcacc
actggttgtttatcaagtatcccacaaatgaaaaaaatttcaacatcctatgaggaaaga
cggaagcaagcgacagctattgttttactaggagtaataggagctgaatttggtgctgaa
attgaacctcctaaattgttgaccagacctcgaagttctagtcaaattcctgaaggcttt
ggtttgactagtggaggatccaactactcactggccagacatacttgtaaggctctgaca
tttcttctgcttcagccaccgagccccaaacttcctccacacagcactatccgtcgaaca
gccattgacctgattgggcgaggattcacagtgtgggagccttacatggatgtatctgct
gttctgatggggcttctggaactctgtgctgatgcagagaaacaacttgccaacatcaca
atggggctgcctctgagccctgcagctgactccgcccgctccgcaaggcatgccctctct
ctcattgccactgccagaccacccgccttcatcaccactatagccaaagaggtacacaga
catacagctcttgcagcaaatacccaatcgcagcagaatatgcacactacagcccttgca
cgagctaaaggggaaatcctgagagtcattgaaattctcatcgaaaagatgcctacagat
gttgtggatcttcttgtggaggttatggacatcattatgtactgcctagaaggatcttta
gttaaaaagaaaggtcttcaagaatgttttccagctatctgcaggttctacatggtcagc
tattatgagaggagtcacagaatagcagttggagcacgccatggttcagtggccctgtac
gacatccggactggaaaatgtcagacaatccatggacacaagggaccaatcactgcagtg
gcctttgctcctgacgggcgatatcttgccacctactcaaacactgacagccacatttct
ttctggcagatgaatacatcactcttgggaagcatcggcatgctgaattcagctcctcag
ctgcgctgcattaaaacctaccaggtgcccccagtgcagccagcatctcctggctcccac
aatgccctcagactcgctcggctcatctggacttccaaccgcaacgtcatcctcatggcg
cacgacgggaaggagcaccgcttcatggtctag
DBGET
integrated database retrieval system
