Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957055
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Entry
101957055 CDS
T10664
Symbol
Nup107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X2
KO
K14301
nuclear pore complex protein Nup107
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03013
Nucleocytoplasmic transport
iti05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101957055 (Nup107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101957055 (Nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101957055 (Nup107)
03036 Chromosome and associated proteins [BR:
iti03036
]
101957055 (Nup107)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101957055 (Nup107)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101957055 (Nup107)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF8594
Motif
Other DBs
NCBI-GeneID:
101957055
NCBI-ProteinID:
XP_005328779
UniProt:
I3M392
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MDRSGFAEMSSPVIREAEVTRTARKQSAQKRALIRASQDENFGNTTPRNQIIPRTPSSFR
QPFTPPNRNFLRHPDVSSILGTGGRSPRLTQSSGFLGNLSMVTNLDDSNWAAAFSSQRLG
LFTNTEPHNVTEDVNLSAVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYENI
CGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSSLEDENMF
AIAGINASEKTVVEALFQRDSLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKSVYWENT
LHTLKQRQLASYMGSVRPLVTELDPDAPIRQKMPLDDLDREDEVRLLKYLFTLIRAGMTE
EAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRRIWKISCWRMAEDELF
NKYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVMTLDITEELPR
EYLEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSRS
NLPGHLLRFMTHLILFFRTLGLQTKEEVSIEILKTYIQLLINEKHTNLIAFYTCHLPQDL
AVAQYALFLEGVTEFEQRHHCLELAKEADLDVATITKTVVENIRKKDDGEFSHHDLAPSL
DTATTEEDRLKIDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDSI
AEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSTPQKPTLIPQP
TFTEKVAYEHKEKKYEMDYGIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEEDH
ERTHQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKL
LQKLRESSLMLLDQGLDPLGYEIQS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagtggctttgcagagatgtcatcccctgtgatccgagaggcagaggtgaca
cggactgctcggaaacagagtgcacaaaaaagagccttaatccgggcttctcaagatgaa
aattttggaaatactacaccaagaaaccagattatcccacgaactcccagttcatttcga
cagccttttactccaccaaatcgaaattttctaaggcatccagatgtttcctccattctt
ggaacaggagggaggtctccccggcttacacagtcttcaggattcttgggaaatctgtcc
atggtaactaatctggatgacagtaattgggcagctgcattctcatcacagcgtttaggg
ctcttcacaaacacagagccgcacaatgtaacagaggatgtaaatctcagtgccgttatg
ttacgtgaagatgatcctggagaagctgcatccatgagtatgttttctgatttcctgcag
tcgtttttgaagcactcttcaactacagtttttgaccttgtggaagagtatgaaaatatt
tgtggtagtcaggtgaatatactgagtaaaatagtgagccgagcaacccctggactgcaa
aagttttcaaaaacagccagtatgctgtggcttcttcaacaggagatggtcacatggagg
ctgctagcttctttgtatagggacagaatacaatcttcattagaagatgaaaatatgttt
gcaattgctggtattaatgccagtgagaaaacagttgtggaagctttatttcagagagat
tcacttgttcgacaaagtcagctggtggtagattggttggagagtattgccaaagatgaa
attggagatttttctgataatattgagttttatgcaaaatcagtatattgggaaaatact
ctccataccttaaaacaacgacaactagcctcttacatgggaagtgtccgtccacttgtc
actgaattggatcctgatgctcccataagacagaaaatgccacttgatgatctggataga
gaagatgaagttagattactcaagtatcttttcactctaattcgggctggaatgacagaa
gaggcacaacgactctgtaaacgttgtggtcaagcatggagagctgcaacactggaaggc
tggaaactgtatcatgaccctaatgttaatggaggaacagaattagaacctgttgaaggg
aatccatatagacgcatttggaaaattagttgttggagaatggcagaagatgagctcttc
aataaatatgagagagcaatttatgcagctttaagtgggaatctcaagcagcttcttcct
gtctgtgatacctgggaagacacagtatgggcctacttccgtgtgatggtagacagtctg
gtggaacaggagatccggacatcagtaatgacactggatataactgaagaactccctaga
gaatatttagaagcaaattggaccttagaaaaggtttttgaagaacttcaagctactgat
aaaaagagagttctggaagagaatcaagaacattatcatatagttcaaaagttccttatc
ctgggagacattgatggtttaatggatgagtttagcaaatggctttccaaaagcagaagc
aatctacctggacacctcctccgctttatgactcacctcattttgttcttccgcactctg
ggactacagaccaaagaagaagtttctattgaaattttgaagacatatatacagctttta
ataaatgagaaacatacaaatcttatagccttttatacctgtcatttgcctcaagatctt
gccgttgcccaatatgctttatttttggaaggtgttacagaatttgaacaacgccatcat
tgcctagagctggctaaggaagcagatttggatgttgcgacaataacaaaaactgtagtt
gagaatattcgaaagaaagatgatggtgaatttagtcatcatgacctggctccatcccta
gatactgccactacagaggaggaccgtttaaagattgatgtaattgactggttggtattt
gacccagcacagagggcagaagcactgaaacaaggcaatgcaataatgagaaaattctta
gcatctaaaaagcatgaagctgcaaaagaagtatttgtgaaaattcctcaggattctata
gcagaaatctataatcagtgggaggaacaaggaatggaaagtccacttcctgctgaagac
gataatgctatcagagaacatttgtgcattagagcttatttggaagcccatgaaacgttt
aatgaatggtttaagcatatgaattcaactccacaaaaacctactctgataccccagcca
acttttactgagaaagtggcttatgaacataaagaaaagaagtacgaaatggattacggt
atttggaaagggcatttggatgcactaactgctgatgtgaaggaaaaaatgtacaatgtc
ttattgtttgttgatggaggttggatggtagatgtcagagaggatgctgaggaagaccat
gaaagaacacatcagatggttttattgagaaagctatgtttgccaatgttgtgttttctg
cttcacaccatattgcatagtactggtcagtatcaggaatgcctgcagttagcagatatg
gtatcctctgagcgccataaactctatctggtattttctaaggaagaactaagaaaattg
ctgcagaagttaagagaatcctctttaatgcttctagaccagggacttgacccattaggg
tatgaaattcagtcataa
DBGET
integrated database retrieval system
