Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957082
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Entry
101957082 CDS
T10664
Symbol
Pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03030
DNA replication
iti03410
Base excision repair
iti03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101957082 (Pole)
03410 Base excision repair
101957082 (Pole)
03420 Nucleotide excision repair
101957082 (Pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iti03032
]
101957082 (Pole)
03400 DNA repair and recombination proteins [BR:
iti03400
]
101957082 (Pole)
Enzymes [BR:
iti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101957082 (Pole)
DNA replication proteins [BR:
iti03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
101957082 (Pole)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
101957082 (Pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
101957082
NCBI-ProteinID:
XP_005336406
LinkDB
All DBs
Position
Unknown
AA seq
2279 aa
AA seq
DB search
MVLRNSGLRRAEPGADGEASRDDGPTSSVSALKRLERSQWTDKMDLRFGFERLKEPGEKT
GWLINMHPTEVLDEDRRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKVETVPKEDLDLPNHLVGLKRNYIKLSFHTVEDLVKVRKEISPAVKKNREQ
DRASDAYTTMLSSVLQGGSVITDEEETSKKVADQLDNIVDMREYDVPYHIRLSIDLKIHV
AHWYNIRYRGNAFPVDITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEVHLIQRWFEHIQETKPTVMV
TYNGDFFDWPFVEARAAAHGLSMYQEIGFQKDSQGEYKAPQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHALEEEEKVPVEQATNFQEVC
DQIKTKLISLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPG
ANCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLFPEGPVRAFHELSREEQAKYEK
RRLADYCRKAYKKLHVTKVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAMEAGDAAEVKRCRNMEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTNAKKPKVTISYPGAMLNIM
VKEGFTNDQYQELAEPSSLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGSTLEEVYGSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKSDIYKQKKISELFVLEGKRQIVMAQG
LEDSPRPGAPDMEDFGLIKPPHPAIPVATKRKRVLWESQEESQELTLTVPWREILGQPPT
LGTTQEEWLVWLRFHKKKWQLQARQRLARRKKQRLESAEDLPRHGAIRDGPATGLGSFLR
RTARSILDLPWQIVQISQTSQAGLFRLWAIIGSDLHSIKLSIPRVFYVNQRVAKAEEGPS
CRKVNRILPRSNMVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQ
LGCVCVVNRQLVRHLSGWEAETFTLDHLEMRSLAQFSYLEPGSIRHIYLYHHTQGHKALF
GLFIPSQRRASVFVLDTVRSNQMPSLSTLYSAEHSLLLEKVGPELLPPPRHTFEVRAETD
LKTICRAIQRFLLAYKEERRGPTLIAVQSSWELQKLASEIPVLEEFPLVPVRVVDKISYG
VLDWQRHGARRMIRHYLHLDTCLSQAFEMSRYFHIPVGNLPEDISTFGSDLFFARHLQRH
NHLLWLSPTARPDLGGKEADDNRLVMEFEDRATVEINSPGCYSTVCVELDIQNLAVNTIL
QSHHVNDMEGAGSMGISFDVIQQASLEDMVTGNQASNAPASYDETALCSSTFRILKSMVV
GWVKEIMQYHNVYADNQVVHFYRWLQSSSSLLHDPALHRTLHNMMKKLFLQLVAEFQRLG
SSVVYANFNRIILCTRKRRIEDAIAYVKYITNSIHSKELFHSLTISFSRCWEFLLWMDPS
NYGGIKGKVPSGIHCGQQEPQKGEEAEDEQEDEEEQEESVEESEVEDLLENNWNILQFLP
QAASCQSYFLMIVSAYIVAVYHSMKEQLRRSGPGTTPVRRRGASQFSQEAEGAAGALPGM
ITFSQDYVANELTQSFFTITQKIQKKVTGSRSSTEPSEMFPVLPGSHLVLNNPALEFIKY
VCKVLSLDTNITNQVNKLNRDLLRLVEVGEFSEEAQFRDPCRSYVLPEVICHNCNFCRDL
DLCKDSSFSQDGAVLPQWLCPNCQATYDSAAIEMALVEALQRKLMAFTLQDLVCLKCHGV
KETHMPVYCSCAGDFTLTIRTQVFMEQVGIFRNIAQHYSMPHLKETLEWLLQKSPQPDH
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaggaacagcgggctgcggcgcgcggagccgggcgcggacggcgaggccagc
cgcgatgatggccccacttcctcagtctctgcgcttaagcgcctggagcggagccagtgg
acagataagatggacttgcgatttggttttgagaggttgaaggagcctggtgagaagacc
ggctggctcatcaacatgcaccctactgaggtcttagatgaagatagacgcttagtcagt
gcagtggattactactttattcaagatgatggaagcagatttaaggtggccttaccttat
aagccgtatttctacattgcaaccagaaagggctgtgaacgagaagtttcatcgtttctc
tccaagaagtttcagggtaaaattgcaaaagtagagactgtccccaaagaggacctggac
ttgccaaatcacttggtgggtttgaagcgaaattacatcaagctgtccttccacactgtg
gaggaccttgtcaaagtgaggaaagaaatctcccctgctgtgaagaagaatcgggagcag
gaccgtgccagtgatgcatacacaaccatgctctccagcgttctgcaagggggcagtgta
attactgatgaagaggaaacctctaagaaagtagctgatcagctggataacatagtggac
atgcgcgagtatgacgtcccctaccacatccgcctctccatcgaccttaagatccatgtg
gctcattggtacaatatcagataccggggaaatgcttttccagtggacattacccgccgg
gatgaccttgttgagcgacctgaccctgtggtgttggcatttgacattgagaccaccaaa
ctgcccctcaaatttcctgatgctgaaacagaccagattatgatgatttcttacatgatt
gatggccagggctacctcatcaccaacagggagatcgtttctgaagatattgaagatttt
gagttcacccccaaaccagaatatgaagggcccttctgtgtcttcaatgaacccgatgag
gtccatctgatccagcgatggtttgagcatatccaggagactaaacccaccgtcatggtc
acttacaacggggacttttttgactggccgttcgtggaggccagagcagcggcccacggc
ctgagcatgtaccaggagatcggcttccagaaggatagccagggggagtacaaagcgcca
cagtgcatccacatggactgcctcaggtgggtaaaaagggacagctaccttcctgtgggc
agtcataacctgaaggcagccgccaaggctaagcttggctacgaccctgtggaattagat
cctgaggacatgtgccggatggccaccgagcagccccagactctggccacatactctgtg
tcggatgctgttgccacttactacctgtacatgaagtatgtccatcccttcatatttgcc
ctgtgcaccattatccccatggagcctgatgaggtgctgcggaagggctcgggcacactg
tgtgaggccttgctgatggtgcaggccttccacgccaacatcatcttccccaacaagcaa
gagcaggagttcaacaagctgacagacgatggccacgtgttggatgctgagacctacgtg
gggggccacgtagaggcactagagtcgggcgtcttccgcagtgacatcccctgccggttt
aagatgaatcctgctgcgtttgactttctgctgcagcgggtggagaagaccatgcgccat
gcccttgaggaagaggagaaggtgcctgtggagcaggccaccaactttcaagaggtgtgt
gatcagataaagaccaagctcatctctctgaaagatgttcccaaccgaatcgaatgtccc
cttatctaccacctagatgtgggggccatgtaccccaatatcatcctgacaaaccgcctg
cagccctctgccatggtagacgaggccacctgtgctgcatgtgacttcaacaagcctgga
gcaaactgccagaggaagatggcctggcagtggaggggcgagttcatgccagccagtcgt
agtgaataccatcgaatccagcaccagctggagtcagaaaagtttccccccttgtttccc
gaggggccagtgcgggcctttcacgagctgtcccgggaggagcaggccaaatacgagaag
cggaggctggcagattactgccggaaagcctacaagaagctccatgtcaccaaggtggag
gagcgcctcaccaccatctgccagcgggagaactccttctacgtggacacggtgcgcgcc
ttccgagacaggcgctacgagttcaaagggctgcacaaggtgtggaaaaagaagctctct
gcagccatggaggcgggtgatgcagccgaggtgaagcgctgcaggaacatggaggtccta
tatgactcgctgcagctggctcacaagtgcattctcaactccttctacggctatgtcatg
cgcaagggggcacgctggtactccatggagatggctggcattgtctgctttacgggggcc
aacatcatcacccaggcccgagaactgatagaacagattgggaggcccttggaactggac
acagatggaatatggtgcgtcctgcccaatagcttcccagaaaattttgtcatcaagacg
accaatgcgaagaaacccaaggtgaccatctcctaccctggggccatgttgaacatcatg
gtcaaggaaggctttaccaacgaccagtaccaggagttggcagagccctcctcactcacc
tacgtcacccgctcagagaacagcatcttttttgaagttgacgggccctaccttgccatg
atccttccagcctccaaagaagaggggaagaaactgaaaaagagatatgctgtatttaat
gaagatggttccctggctgagctgaagggcttcgaggtcaaacgccgtggggagctgcag
ctgattaaaatcttccagtcctctgtgtttgaggccttcctcaagggcagcaccctggag
gaagtgtatggctccgtcgccaaggtggccgactactggctggacgtgctatacagcaag
gcagctaacatgccggattctgagctgttcgagttgatatctgagaaccgctcaatgtct
cggaagctagaagattatggggagcagaagtccacatctatcagcacagcaaagcgcctg
gctgagttcctgggagaccagatggtcaaggatgctgggctgagctgccgctacatcatc
tcccgcaagcctgagggctctcctgtcaccgaaagggccatcccacttgccattttccaa
gcagagcccacagtgaggaagcactttcttcggaaatggcttaagagctcatcccttcaa
gactttgatattcggacaattctggactgggactactacatcgagcgcctggggagtgcc
atccagaagatcatcaccatccccgcagctctgcagcaggtgaagaacccagtgccacgc
gtcagacacccagactggctgcataagaagctgctggagaagagtgacatctacaagcag
aagaagatcagtgagctgtttgtccttgagggaaagagacagatcgtgatggctcaaggc
ctagaagacagccccaggccaggtgctcccgacatggaggactttggcctcataaagcca
ccccatccagcaatccctgtagccaccaagaggaagcgagtcctctgggagagccaagag
gagtctcaggaactcacgctgacggtgccctggcgagagatcttggggcaacctcctaca
ctcggcaccacccaggaagaatggctggtctggctccggttccacaagaagaagtggcag
ctacaggcccgacagcgcctggcccgcaggaagaagcagcgtctggagtcagcagaggat
ctgccaaggcatggggccatccgagacgggcctgccacagggctggggagcttcttgaga
agaactgcacgtagcattctagaccttccctggcagattgtgcagatcagccagaccagc
caggccggcctgttcaggctgtgggccatcattggtagtgacttgcactctatcaagctg
agcatcccccgcgtgttctatgtgaaccagcgagtggccaaagcagaggaggggccttcc
tgtcggaaggtgaaccgtattcttcctcgttccaacatggtctacaatctctatgagtat
tcagtgcctgaggacatgtaccaagaacacatcaacgagatcaacactgagctgtcagcg
ccggacatcgagggtgtctacgagactcaggtgccattgttgttccgggcgctggtgcag
ctgggctgtgtgtgtgtggtcaacagacagctggtgcgacacctctcgggctgggaagcc
gagaccttcaccctagatcaccttgagatgcgttctctggcccaattcagctacctggaa
ccaggcagcatccgccacatctacctgtaccaccacacacagggccacaaggcactcttt
gggctcttcatcccctcacagcgcagagcatctgtgtttgtgttggacacggtgcgcagc
aaccagatgcccagcctcagcaccctgtactcagcggagcacagccttctgctagagaag
gtgggccccgagctcctgccaccccccagacatacctttgaagttcgtgctgaaactgac
ttgaagaccatctgcagggccatccagcgcttcctcctggcctacaaggaggaacgccgg
ggacccaccctcattgcagtgcagtccagctgggaactgcagaagctagccagtgagatc
cctgtgctggaggagttcccgctggtgcctgtgcgcgtggtcgacaagatcagctatgga
gtcctagactggcagcggcacggagcccgccgcatgatccggcactacctccacctggac
acctgcctgtcacaggccttcgagatgagcaggtacttccacattcccgttgggaatctg
ccagaggacatctccacctttggctccgaccttttctttgcccgccacctgcagcgtcac
aaccacctgctctggctgtcccccacagcccgtcccgacctgggtgggaaggaggctgac
gacaaccgcctcgtcatggaattcgaggaccgtgccactgtggagattaacagtcctggt
tgctactccaccgtgtgtgtggagctggacatccagaacctggctgttaacaccatcctc
cagtcccaccacgtgaacgacatggagggggccggcagcatgggcatcagctttgacgtg
atccagcaggcctcactggaggacatggtcacaggcaatcaggcctctaatgccccagcc
agctacgacgagacagccctctgctccagcaccttcaggatcctcaagagcatggtcgtg
ggctgggtaaaggagatcatgcagtaccacaacgtctacgccgacaaccaggtggtgcac
ttctaccgctggctacagtcctcaagctctctgctgcatgaccccgccctgcaccggaca
ctccacaacatgatgaagaagctcttcctgcagctcgtggctgagttccagcgcctgggg
tcatcagtcgtctatgccaacttcaaccgaatcattctctgtaccagaaagcgccgcatt
gaggacgccattgcctacgtgaagtatatcaccaacagcatccattctaaagagctcttc
cattccctgaccatttccttctcacgatgctgggaattccttctgtggatggatccatct
aattatggtggaatcaaaggaaaagtgccatctggaattcactgtggacagcaagagccc
cagaaaggagaggaagcagaggatgagcaagaagatgaggaggagcaggaggaaagtgtg
gaggagtccgaggtagaggacctcctggagaacaactggaacattttacagtttctgcca
caggcagcttcctgccagagctacttcctcatgatcgtttcggcgtacatcgtggctgtg
taccacagcatgaaggagcagctgagacgcagtggcccgggcaccacccctgtgaggagg
aggggggccagccagttctcccaggaggctgaaggggcagccggagccctccctggaatg
atcaccttctctcaggattatgttgcaaacgagctcactcagagcttcttcaccatcact
cagaagattcagaagaaagtcacaggctctcggagctccacagagccctcagagatgttc
cctgtcctccctggctcccacttggtgctcaacaaccctgctctggagttcatcaaatat
gtgtgcaaggtgctatctttggatacaaacatcaccaatcaggtgaacaagctgaaccga
gacctgcttcgcctggtagaggttggtgagttctccgaggaggcccagttccgagacccc
tgccgctcctatgtgctccccgaggtgatctgccacaactgcaacttctgccgggacttg
gatctgtgcaaagattcctccttctcccaggatggagctgtcctgcctcagtggctctgc
cccaactgtcaggccacctatgactcagctgccatcgagatggccctggttgaagccctg
cagagaaagctgatggccttcaccctgcaggacctggtctgcctgaagtgccacggtgtg
aaggagacccacatgccagtgtactgcagctgtgccggggacttcaccctcacaatccgc
actcaggtcttcatggagcaggttggcatcttccggaacattgcccagcactacagcatg
ccacacctcaaggagaccctggagtggctgctgcaaaaaagccctcagccagaccactag
DBGET
integrated database retrieval system
