Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957225
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Entry
101957225 CDS
T10664
Symbol
Psma6
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03050
Proteasome
iti05010
Alzheimer disease
iti05012
Parkinson disease
iti05014
Amyotrophic lateral sclerosis
iti05016
Huntington disease
iti05017
Spinocerebellar ataxia
iti05020
Prion disease
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
101957225 (Psma6)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101957225 (Psma6)
05012 Parkinson disease
101957225 (Psma6)
05014 Amyotrophic lateral sclerosis
101957225 (Psma6)
05016 Huntington disease
101957225 (Psma6)
05017 Spinocerebellar ataxia
101957225 (Psma6)
05020 Prion disease
101957225 (Psma6)
05022 Pathways of neurodegeneration - multiple diseases
101957225 (Psma6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
iti01002
]
101957225 (Psma6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
iti03051
]
101957225 (Psma6)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
101957225 (Psma6)
Peptidases and inhibitors [BR:
iti01002
]
Threonine peptidases
Family T1: proteasome family
101957225 (Psma6)
Proteasome [BR:
iti03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
101957225 (Psma6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
101957225
NCBI-ProteinID:
XP_040131295
LinkDB
All DBs
Position
Unknown
AA seq
208 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCYWFVLTLLRGHIPVGREMSSIKTAITCLSTVLSIDFKPSEIEVG
VVTVENPKFRILTEAEIDAHLVALAERD
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtggttccagcgctggttttgaccgccacattaccattttttcgcccgagggc
cggctttaccaagtagaatatgcttttaaggctataaaccagggtggtcttacatcagta
gctgtcagagggaaagactgtgcagtaattgtcacacagaagaaagtacctgacaaatta
ttggattccagcacagtgactcacttattcaagataactgaaaacattggctgtgtgatg
actggaatgacagctgacagcagatcccaggtacaaagggcacgctatgaagcagctaat
tggaaatacaagtatggctatgagattcctgtggacatgctgtgtaaaagaattgctgat
atttctcaggtctacacacagaatgctgaaatgaggccacttggttgttattggtttgta
ctgactttattaagggggcatataccagtgggaagagagatgagcagtataaagactgca
atcacatgcctgtctactgttctatcaattgatttcaaaccttcagaaatagaagttggt
gtagttacagttgaaaatcctaaattcaggattcttacagaagcagagattgatgctcac
cttgttgcactagcagagagagactag
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integrated database retrieval system
