Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957257
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Entry
101957257 CDS
T10664
Symbol
Msr1
Name
(RefSeq) macrophage scavenger receptor types I and II isoform X2
KO
K06558
macrophage scavenger receptor 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101957257 (Msr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101957257 (Msr1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
iti04090
]
101957257 (Msr1)
Membrane trafficking [BR:
iti04131
]
Endocytosis
Phagocytosis
Scavenger receptors
101957257 (Msr1)
CD molecules [BR:
iti04090
]
Proteins
101957257 (Msr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Macscav_rec
Collagen
PspA_IM30
CENP-F_leu_zip
Med9
TTC3
EMP24_GP25L
Uds1
Motif
Other DBs
NCBI-GeneID:
101957257
NCBI-ProteinID:
XP_005330849
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MEQLDSFPDQLEDLDTYSESVKFDARSMTALLPPNPKNGPALQEKLKSFKAALIALYLLV
FAVLIPIIGIVAAHLLKWEMKNCTVDPINANDISQSLGQRNGSEAKMKFQEFVMESMVNM
EKRIQSISDSEANLINSEHFQNFSVTTDQRFNDSLLQLNNLVSSVQEYENTIGEISKSLI
NLNSTLLDLQLSIETLNGKIQETTLKQQEEINKLEERVHNTSAEIKSLKEEQVYVQQEIK
REVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGSIGESGQPGIPGPIGP
PGLKGDRGATGFPGTRGLPGFTGKAGRTGNPGQKGQKGEKGSGSTYRPVQLPDHIRGRPF
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctggatagctttcctgaccaactggaggacctggatacctattcagaatct
gtgaaatttgatgctcgttcaatgacagcactgcttcctcccaatcctaaaaatggccct
gcccttcaagagaaactgaagtccttcaaagctgcactaattgccctttatctccttgtg
tttgcagttctcatacctatcattggaatagtggcagctcatctcctgaagtgggaaatg
aagaattgcacagttgatccaattaatgcaaatgatatatctcaaagtctgggacaaaga
aatggcagtgaagctaaaatgaaatttcaagaatttgtaatggaaagcatggtcaacatg
gagaagagaatccaatctatttcagattcagaagccaatctcataaattcagaacacttc
caaaatttcagtgtgacaacggatcaaagatttaatgatagtcttctccagctaaataac
ttggtttcctcagtccaggaatatgagaatacaataggtgaaatctccaagtccttaata
aatctgaatagcaccttacttgatttgcagctcagtatagaaacactgaatggcaaaatt
caagagactactttgaaacaacaagaggaaatcaataaattagaagaacgggtacacaac
acatcagcagaaattaagtctctaaaagaagaacaagtttatgtgcaacaggaaataaaa
agagaagtgaaagtattgaataacatcactaatgatctcagactgaaagactgggaacat
tctcagacattgagaaatatcactttaattcaaggtcctcctggacccccaggtgaaaaa
ggcgacagaggttcgattggagagagtggccagcctggcattccgggtccaataggtcct
ccaggtcttaaaggtgatcggggggcaactggctttcctggcacaaggggactcccagga
tttacaggaaaggcggggaggacaggaaatcctggacaaaaaggccaaaagggagaaaaa
ggaagtggaagcacatacagaccagtacaacttcctgatcatattaggggaagacccttt
taa
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