Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957318
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Entry
101957318 CDS
T10664
Symbol
Pkd2
Name
(RefSeq) polycystin-2
KO
K04986
polycystin 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
iti03037
]
101957318 (Pkd2)
04040 Ion channels [BR:
iti04040
]
101957318 (Pkd2)
Cilium and associated proteins [BR:
iti03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101957318 (Pkd2)
Ion channels [BR:
iti04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101957318 (Pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
101957318
NCBI-ProteinID:
XP_040148098
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MVNSSRVQPQQPGDVKRQPPPRAPGPGRLMAGGAGFPAPGGLREQRGLEIEMERIRQAAA
RDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEDDDEEEVEGEEGGMVVEMDVEWRPGS
RRSAVSSTVSSVGARGRGLSSYHGSGHPNGRRRRREDQGPPCPSPVGGGDPLHRHLPLDG
QPPRVAWAERLFRGLRGLWGTRLMEESNTNREKYLKSVLRELVTYLLFLIVLCILTYGMM
SSNVYYYTRIMSQLFLDTPLSKTEKTNFKTLSSMEDFWKFAEGPLLDGLYWKVQPSNQTE
ADNRSFIFYENLLLGVPRIRQVKVRNGSCSIPQDLREEIKECYDVYSVSSEDRAPFGPRN
GTAWIYTSEKDLNGSSHWGIIASYSGAGYYLDLSRTREETAAQITSLRKNVWLDRGTRAT
FIDFSVYNANINLFCVVRLLVEFPATGGVVPSWQFQPVKLIRYVTTFDFFLAACEIIFCF
FILYYVVEEILEIRIHKLQYFRSFWNCLDVVIIVLSVMAIGISLYRTSNVEGLLHFLEDQ
NTFPNFEHLAYWQIQFNNIAAVTVFFVWIKLFKFINFNRTMSQLSTTMSRCAKDLFGFAI
MFFIIFLAYAQLAYLVFGAQVDDFSSFQECMGYHKALVKLKLKKNTVDDISESLRQGGGK
LNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDHSS
LPRPMSSRSFPRSLDDSEEDDDEDSGHSSRRRGSISSGVSYEEFQVLVRRVDRMEHSIGS
IVSKIDAVIVKLETMERTKVKRREVLGRLLDGVAEDERLGRDSEIHREQMEQLVREELER
WESDDAASQISHRLGTPVGLNGQPRPRGSRPSSSQSTEGAEGGGGNGSANMHM
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactccagccgcgttcagccgcagcagcccggggacgtgaagcggcagcccccg
ccccgagctcccggcccaggccgcctgatggcgggcggcgcgggcttcccagccccgggc
ggcctccgggagcagcggggcctggagatcgagatggagcgcatccggcaggctgccgcg
cgggaccctccagcgggagcctcggcctccccctctcctccgctctcgtcctgctccagg
caggcgtggagccgcgacaacccgggcttcgaggctgaggaagacgacgacgaagaggag
gtggaaggggaagaagggggaatggtggtggagatggacgtggagtggcgcccgggcagc
cggaggtcagcagtctcctccactgtgagctctgtgggcgcccgcggccgggggctgagt
agctaccacggatctggccacccgaacgggaggcggcgccgacgagaggaccagggtccg
ccatgccctagcccggtcggcggcggggacccactgcatcgccacctccccctggacggg
cagccgccccgcgtggcctgggctgagaggctgtttcgagggctgcgaggtctctgggga
acaagactcatggaagaaagcaacactaaccgagagaaataccttaaaagtgttttacgg
gaactggtcacatacctcctttttctcatagtcttgtgcatcttgacctatggcatgatg
agctccaatgtatactactatacccggataatgtcgcagctcttcctagacaccccattg
tctaaaacagagaaaacgaactttaaaactctttcttcaatggaggacttctggaagttt
gcagaaggccccttactggatgggctgtactggaaggtgcagcccagcaaccaaacagaa
gctgacaaccgaagtttcattttctacgagaatctgctgttaggggttccacgcatacga
caagtcaaagtcagaaatggatcctgttccatcccccaggatttgagagaggaaattaaa
gagtgctatgatgtttactctgtcagtagcgaagacagggctccatttgggccacgaaat
ggaactgcttggatctacacaagtgaaaaagacttgaatgggagtagccactggggaata
atcgcatcttacagtggagctggctattacctggatttgtcaagaaccagagaggaaaca
gctgcccagattactagcctcaggaaaaatgtctggttggaccgaggaaccagggccact
tttattgacttctcagtgtacaatgccaacattaacctgttctgcgtggtcaggttattg
gttgaattcccagcaacaggcggtgtggttccctcttggcaatttcaacctgtaaagctg
attcgctacgtcaccacttttgatttcttcctggcagcctgtgagattatcttttgtttc
tttatcctttattatgtcgtggaagagatattggaaattcgcattcacaaactacaatat
ttcaggagtttctggaattgtctggatgttgtgatcattgtgctctcggtgatggctata
ggaattagcttatatcgaacatcaaatgtggagggtctacttcactttctggaagaccag
aatactttccccaactttgagcatctggcatattggcaaatacaattcaacaatatagct
gctgtcacagtattttttgtgtggattaagctcttcaaattcatcaattttaacaggacg
atgagccaactgtctacaactatgtctcggtgtgccaaagacctctttggctttgccatt
atgttcttcattatattcttagcatatgctcagttggcataccttgtctttggtgctcag
gttgatgacttcagttctttccaagaatgtatgggataccataaagctttggtcaaacta
aaactgaaaaaaaatactgtggatgacatttcagagagtctgcggcaaggaggaggcaag
ttaaactttgacgaacttcgacaagatctcaaagggaagggccatactgatgcagagatt
gaagcaatattcaccaagtatgaccaagatggagaccaggagctcactgaacatgaacat
cagcagatgagagatgacttggaaaaagagagggaggacctggacttggaccatagctct
ttgccgcgtcccatgagcagccgcagtttcccaagaagcctggatgactctgaggaggat
gacgacgaagacagtggacacagctccagaaggaggggaagcatctccagtggggtttct
tatgaagagtttcaagtcctggtgaggcgcgtggaccgcatggagcactccatcggcagc
attgtgtccaagatcgatgctgtgatcgtcaagttagagaccatggagcggaccaaagtg
aagagacgggaggtgctagggaggctgctggatggggtggccgaggatgaaagactgggt
cgtgacagtgaaatccacagggaacagatggagcagttagtgcgggaagagctggagcgc
tgggaatccgatgacgcagcttcccagataagtcaccggctaggcacacctgtgggactc
aatggtcagcctcgccccagaggatcccgtccttcctcctcccagtccacagagggcgca
gaaggtggaggtggaaatgggagtgccaatatgcacatgtga
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