Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957441
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Entry
101957441 CDS
T10664
Symbol
Setd1b
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00310
Lysine degradation
iti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
101957441 (Setd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101957441 (Setd1b)
Enzymes [BR:
iti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
101957441 (Setd1b)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
101957441 (Setd1b)
HMT complexes
COMPASS/SET1 complex
101957441 (Setd1b)
COMPASS/SET1 complex (yeast)
101957441 (Setd1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
101957441
NCBI-ProteinID:
XP_040145454
LinkDB
All DBs
Position
Unknown
AA seq
1984 aa
AA seq
DB search
MENSHPPHHHHQQPPPQPGPSGERRNHHWRSYKLMIDPALKKGHHKLYRYDGQHFSLAMS
SNRPVEIVEDPRVVGIWTKNKELELSVPKFKIDEFYVGPVPPKQVTFAKLNDNIRENFLR
DMCKKYGEVEEVEILYNPKTKKHLGIAKVVFATVRGAKEAVQHLHSTSVMGNIIHVELDT
KGETRMRFYELLVTGRYTPQTLPVGELDAVSPIVNETLQLSDALKRLKDGSLSAGCGSGS
SSVTPNSGGTPFSQDTAYSSCRLDTPNSYGQGTPLTPRLGTPFSQDSSYSSRQPTPSYLF
GPDPTATFKARRHETKFTDAYNRRHEHHYVHNSAAVAAVAGAAAPFRGSSDLPFGAVGSS
GGSSGPPFKAQPQDSATFAHTPPPAQAAPTPGFKSAFSPYQTPAPPFPPPPEEPTTTATF
GARDSGEFRRAPAPPPLPPAEPLAKEKPGTPPGPPPPDTNSMELGGRPTFGWSPEPCDSP
GTPTLESSPAGPEKPHDSLDSRIEMLLKEQRTKLPFLREQDSDAELQMEGSPISSSSSQL
SPLAPFGTNSQPGFRGPSPPSSRPSSTGLEDISPTPLPDSDEDDELDVGLGPRPPPEPGP
PDPTGFLGKSAEVALDLAGDGTPTSEKMDEGQQSSGEDMEISDDEMPSAPITSADCPKPM
VVTAGGAAVAGPNVLAPTLPLPPPPGFPPLPPPPPPPQPGFPMPPPLPPPPPPPPPAHPA
VTVPPPPLPAPPPGVPPPPILPPLPPFPPGLFPVMQVDMSHVLGGQWGGMPMSFQMQTQM
LSRLMTGQGACPYPPFMAAAAAAASAGLQFVNLPPYRGPFSLSSSGPGRGQPWPPLPKFD
PSVPPPGYVPRQEDPHKATVDGVLLVVLKELKAIMKRDLNRKMVEVVAFRAFDEWWDKKE
RMAKASLTPVKSGEHKDEDRPKPKDRIASCLLESWGKGEGLGYEGLGLGIGLRGAIRLPS
FKVKRKEPPDTASSGDQKRLRPSTSVDEEDEESERERDRDMADAPCELAKRDPKGVGVRR
RPARPLELDSGGEEDEKESLSVSSSSSGSSSSGSSTTSPSSSASDKEEERESTEEEAEEE
EAEEEEAEEEEEEEEEEEEEGGPRSQVSCSSSSSTSEKDDDEDSDDTENEGEDAALSGAS
SDEGDSEGEETVSIATSKAEAESSSESSESSEFESSSESSSSSSEDEEEMVAGPEEEEEE
EEVEEEEEEAVAVADESMLPAGAEDFEQDKEEVSLAPGASTVEPLGTEEEVDIEAEDEAP
EEQTPLLEEPPLPVGVEELAGCKEPLEEASLNQEEAMLLSPEPPAREMEAQPPMSPEHVP
EDHLEVEPEPPPMLSLPLQPPLPPPRPPRPPSPPPEPETPEPLHPTVPLEPPPEDQPPRT
PGLCGSLGKSQSTETVPATPGGEPPLSGGSSGLSLSSPQVPGSPFSYPSQSPSLSSGGLP
RTPGRDFSFTPTFPEPSGPLLLPVCPLPAGRRDERSGPLASPVLLETGLPLPLPLPLPLP
LALPVPVLRAQARAPAQLPPLLPATLAPCPPPIKRKPGRPRRSPPSMLSLDGPLVRPPAG
AALGRDLLLLPGQPQTPIFPSTHDPRAVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPA
KLPFKELDNQWPCEAIPLGPRGRDEVTEEFMELAKVRGPWRRPPKKRHEDLMAPSASPEL
SPPQPLFRPRSEFEEMTILYDIWNGGIDEEDIRFLCVTYERLLQQDNGMDWLNDTLWVYH
PSTSLSSAKKKKRDDGIREHVTGCARSEGFYTIDKKDKLRYLNSSRASTDEPPADTQGMS
IPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLF
AMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFAR
FINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCR
GTLN
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagtcaccccccccaccaccaccaccagcagcccccgccgcagcccggccct
tcgggcgagaggaggaaccaccattggagaagttacaagttgatgattgacccggctctg
aaaaaggggcatcataaactgtaccgctacgatgggcagcatttcagcctggcgatgtcc
agcaaccgcccggtggaaattgtggaagatccccgggtcgtcgggatctggaccaaaaac
aaggagctggagctgtcggtgcccaaattcaagatcgatgagttctacgtgggcccggtg
cctcctaagcaggtgacatttgccaagctgaatgataacatccgcgaaaacttcctgagg
gacatgtgcaagaagtatggggaggtggaggaggtggagattttgtacaaccccaagacc
aagaagcacttgggcattgccaaggtggtctttgccacagtcaggggagccaaggaggct
gttcagcatttgcacagcacgtcggtcatgggcaacatcatccacgtggagctggacacc
aaaggagaaacccgcatgcgcttctacgaactgctggttaccggccggtacaccccccag
accctcccagtgggtgagctggatgctgtctctccaattgtgaatgagaccttacagctg
tcagatgccctgaagcgcctcaaggatggcagcctgtctgcgggctgtggctctggctcc
tcctccgtcacccccaatagtggcgggacccctttctcccaggacacagcttactccagc
tgccgcctggacacgcccaactcctatgggcagggcaccccactcacaccgcgcctgggc
acccccttctcgcaggactccagctactccagccgccagcccacaccctcctacctcttc
ggcccagaccccacagcgaccttcaaggctcggcgccacgagaccaagttcaccgatgct
tacaatcgccgccacgagcatcattatgttcataattcggctgcagtggctgcagtggcc
ggggccgcagctccctttcggggctcctcggacctcccatttggggcagttggcagcagt
gggggcagcagtggccctcccttcaaggcccaaccacaggattcagccacatttgcccac
actccaccgcctgcccaagcagcccccactcctggattcaagtcggccttctctccatac
cagaccccagcaccccctttccccccgccccctgaagagcccaccacgacagccaccttt
ggggcccgtgacagtggggagttccggagagcacctgcacctccacccctgccacctgct
gagcctctggccaaggagaagccaggcacaccgcctggcccaccgccccccgacaccaac
agcatggagctaggcggccggccaacctttggttggagtcctgagccctgtgacagccct
ggcacacccacgctggagtcatcccctgcggggcctgagaagccccatgacagcctggac
tcgcgcattgagatgctgctgaaggagcagcgcactaagctgcccttcctgcgggagcag
gactcggacgccgagctgcagatggagggcagccccatctcctcctcttcctcccagctc
tccccactggcccccttcggcaccaactcccagccgggcttccgcggcccctcacccccg
tcctcacgcccctccagcacgggcctagaggacatcagccccacgcctctgcctgactcc
gatgaggatgatgagctggacgtgggcctggggcctcgacccccacctgagccaggcccc
ccagacccaactggttttctgggcaagtcagctgaggtggccttggacctggctggagac
gggactccgacctcagagaagatggatgagggccagcagtcctcaggcgaggacatggag
atctcggacgacgagatgccctcagcccccatcaccagtgccgattgccccaagcccatg
gtggtgaccgcagggggagcagctgtggcaggccccaatgtgctggccccgaccctgccg
ctgcccccgccacccggcttcccaccactgcccccacccccacccccaccccagcccggc
ttccccatgcccccacctctgcctccacccccgccaccaccaccaccagcccatcctgca
gtgaccgtgcccccaccacccctgccagcgccaccgcctggtgtccccccaccacctatc
ctgccgcccctgccgccctttccaccagggctgtttcctgtgatgcaggtggatatgagc
cacgtgctgggcggccagtggggtggcatgcccatgtccttccagatgcaaacgcagatg
ctgagccgtctgatgacaggccagggcgcttgtccctacccacctttcatggccgctgca
gccgctgccgcttcagctgggctacagtttgtcaacctgccgccctaccggggccccttc
tccctaagcagcagtggcccaggccgtgggcagccctggccacccctgcccaagtttgac
ccgtcagtgccgccaccaggctacgtgccacgtcaggaggacccacacaaggccacagtg
gatggcgtcctactggtggtgctcaaggagctgaaggccatcatgaagcgtgacctgaat
cgcaagatggtggaggtggtggccttccgggcctttgacgagtggtgggacaagaaggag
cggatggccaaggcttcactgacccctgtgaagtcaggcgagcacaaggacgaggaccgg
ccaaagcccaaggaccgaattgcctcatgcctgctggagtcctggggcaaaggcgaaggc
ctgggctatgagggcctgggcctgggcattgggctgcgaggggccattcgcctgccttcc
ttcaaggtcaagaggaaggagccaccagatacagcatcatctggtgaccagaagcgcctt
cggccctcaacctctgtggatgaagaagacgaagagtctgagcgggagcgggaccgagac
atggcagatgccccctgcgagctggccaagcgggatcccaagggtgtgggcgtgcggcgg
cggccagctcggccactggagctggacagtggcggggaggaggatgagaaggagtctttg
tcagtgtcctcgtcctcgtctgggtcctcatcctctgggtcctccaccacctcaccctcg
tcctcagcctctgacaaggaggaggagcgggaaagcactgaggaggaagccgaggaggaa
gaagccgaggaggaagaagccgaggaggaggaagaagaggaggaggaggaggaggaggag
ggcggcccccggagccaggtgtcctgctcctccagctcaagcacatccgagaaggatgac
gatgaggacagcgatgacaccgagaacgagggtgaagatgcagccctgtcaggagcaagt
tcggacgaaggagactcagaaggcgaggagacggtgagcattgccacctccaaggcagag
gccgagtcatccagcgagagttctgagtcttctgagtttgaatcaagctccgagtcctcg
tcctcatcctcggaggacgaagaggagatggtggcagggccagaggaagaagaggaggag
gaagaggtggaggaggaggaggaggaggcagtggcagtggcagatgagagcatgctacct
gcaggtgctgaggactttgagcaggacaaggaggaggtgtctctggccccaggggcatct
acagtggagccgctgggcacagaagaagaggtggatattgaagctgaggatgaagcccct
gaggagcagactcctctcctggaggagccccccttgcctgtgggtgttgaggagctggcc
gggtgcaaggagcccctggaagaggctagcctgaaccaggaagaggccatgttgctgtct
ccagagccccctgccagggagatggaagctcagcccccaatgtcccctgaacatgttcca
gaagatcatctggaagtggagcccgagccccctccaatgctgtccttgcctctgcagcca
ccattgccgccaccccggccaccccggccacccagcccacccccagagcctgagacccca
gagcccctacacccaactgtccctctggaacctccccctgaggaccagcccccacgtact
cctggcctctgtggcagtctgggcaagtctcagagtacggaaacagtgccagccacacca
ggcggggagcccccgctatcagggggcagcagcggcctgtccctgagctccccacaggtg
cctggcagtcccttctcctacccatcccagtcccccagcttgagcagcgggggcctccca
cggacacctggccgggacttcagcttcacacccaccttcccagagcccagtgggcccctg
ctcctacctgtctgcccgctcccagctggccggcgagatgagcgctctggccctctggcc
tccccggtgctcttggagacgggccttcctctccccctgcccctgcccctgcccctgccc
ctggcattgcctgtccccgtgctgagggcccaggctcgggcccctgcccagctgccacct
ctgctgcctgccaccctggccccctgcccaccccccatcaagaggaagccgggccggccc
cggcgatccccaccatctatgctgtccttggatgggcccttagtgcggccaccagcaggg
gctgcccttggaagggaccttctgctcctcccaggccagccacagacccccatctttccc
agcacccatgatccccgggctgtgactctggacttccggaacgcagggatcccagccccc
cctccgccccttcccccccagcctcctccacccccacctccaccacctgttgagcctgcc
aagctgccctttaaggagctagacaaccagtggccctgtgaggccatccccctaggccct
cgtgggcgagatgaagtcactgaggagttcatggagctggccaaggtacgggggccgtgg
cgccggccacctaagaagcgccacgaggacctgatggccccctctgcctcgcccgagctc
tctccaccccagcccctcttccggccccgctcagagtttgaggagatgaccatcttatat
gacatctggaacggtggcattgatgaggaagacatccgcttcctgtgtgtcacctatgag
cggctgctgcagcaggacaatggcatggactggctcaacgacacactctgggtctaccat
ccctccaccagcctctcttcagctaagaaaaagaaacgcgatgatggcatccgtgagcat
gtgacaggctgtgcccgcagcgagggcttctacaccattgacaagaaggacaagctcaga
tacctcaacagtagccgcgccagcaccgatgagccccctgcagacacccagggcatgagt
atcccggcgcagcctcatgcctccactcgggcaggctcggagcggcgttcagagcagcgc
cgcctgttgtcctccttcactggcagctgtgacagcgacctactcaagttcaaccagctc
aagttccggaagaaaaagctcaaattctgcaagagccacattcatgactggggcctgttc
gccatggaacccattgcggctgatgagatggtcatcgagtatgtgggccagaacatccgc
caggtgatcgcagacatgcgggagaaacggtatgaggacgagggcatcggcagcagctac
atgttccgagtagaccacgacaccatcatcgatgccaccaagtgcggcaactttgcacgc
ttcattaaccacagttgtaatcccaactgctacgccaaggtgatcacggtagagtcacag
aagaagatcgtcatctactccaagcagcacatcaatgtgaacgaggaaatcacctacgac
tacaagttccccatcgaggacgtcaagatcccttgcctctgtggctcggagaactgccgg
gggaccctcaactag
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integrated database retrieval system
