Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957494
Help
Entry
101957494 CDS
T10664
Symbol
Ocln
Name
(RefSeq) occludin
KO
K06088
occludin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03272
Virion - Hepatitis viruses
iti04382
Cornified envelope formation
iti04514
Cell adhesion molecules
iti04530
Tight junction
iti04670
Leukocyte transendothelial migration
iti05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
101957494 (Ocln)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101957494 (Ocln)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101957494 (Ocln)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101957494 (Ocln)
09158 Development and regeneration
04382 Cornified envelope formation
101957494 (Ocln)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
101957494 (Ocln)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
iti01009
]
101957494 (Ocln)
Protein phosphatases and associated proteins [BR:
iti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101957494 (Ocln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Cation_ATPase_C
HBM
DUF4164
UPF0182
FapA
Laminin_II
APG6_N
TMF_TATA_bd
Swi5
PUMA_CC
GAS
Knl1_RWD_C
Motif
Other DBs
NCBI-GeneID:
101957494
NCBI-ProteinID:
XP_005319582
UniProt:
I3NBV6
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MSSRPFESPPPYRPDEFKPNHYAPSNDIYGGEMHVRPMLSQPAYSFYPEDEILHFYKWTS
PPGVIRILSMLIIVMCIAIFACVASTLAWDRGYGTGLLGGGFGYPYGGSSFGGYGGSYGY
GYGYGYGYGGGYTDPRAAKGFLLAMAAFCFIASLAIFVTSVIRSEISRTRGYYLTVIIVS
AILGILVFIATIVYIMGVNPTAQASGSLYSSQIYALCNQFYTPAVTGVYVDQYLYHYCVV
DPQEAIAIVLGFMIIVAFALIIFFAVKTRRKMDRYDKSNILWDKEHIYEEQPPNVEEWVK
NVSAGTQDIPPPPSDYVERVDSSMVYSSNDKVNGKRSYPESSYKSTPPMPEVAQELPLTS
PMDDFRQPRYSSSGNLETPSKRAPTKGRAGKPKRTEQDHYETDYTTGGESCDELEEDWIR
EYPPITSDQQRQLYKRNFDTGLQEYKSLQAELDEVNRELSRLDKELDDYREESEEYMAAA
DEYNRLKQVKGSADYKRKRNYCKQLKSKLSHIKKMVGDYDRRKT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaggccttttgaaagtccgcctccttatagacctgatgaatttaaaccgaat
cattacgcaccaagcaatgacatatatggtggagaaatgcatgttcggccaatgctctct
cagcctgcatattctttttacccagaagatgaaattcttcatttctacaaatggacatct
cctccaggagtgattcgtattctgtctatgctcattattgtgatgtgtattgctatattt
gcctgtgttgcctccacacttgcctgggacagaggctatggaactggcttactaggaggt
ggttttggctacccttatggaggaagtagctttggtggctacggaggcagctatggctat
ggttatggctacggttatggctatggaggaggctatacggatccaagagcggccaagggc
ttcctgttggccatggctgccttttgtttcattgcctcattggcaatatttgttaccagt
gttataagatctgaaatatccagaacaagaggatattacttgactgtgataatagtgagt
gctatcctcggtatcctggtgtttattgccacaattgtctatataatgggagtcaaccca
actgcccaggcttctggatctttatatagttcacaaatatatgccctctgcaaccagttc
tatacacctgcagttactggagtctatgtggatcagtacttgtatcactactgtgtggtg
gatccccaggaggctattgccattgtgctaggattcatgattattgtggcttttgcttta
ataattttctttgctgtgaaaactcgaagaaagatggaccggtatgacaagtccaatatt
ttgtgggacaaagaacacatttatgaggagcagccacccaatgtggaagaatgggttaaa
aatgtgtctgcaggcacacaagacatacctccacccccatctgactacgtggagagagtt
gatagttccatggtgtactcttccaatgacaaagtgaatggcaagcggtcgtatccagag
tcttcctataagtcaacaccaccgatgcctgaagtggctcaggagcttcccctcacttca
cccatggatgacttcagacagcctcgctacagcagcagtggtaacttagagacaccttca
aaaagggctcccactaagggaagagcaggaaagcccaagagaacagagcaagaccactat
gagacagactacacgacgggtggagagtcctgtgatgagctggaggaggactggatcagg
gaatatccacccatcacttcagatcaacaaagacaactctacaagcgaaattttgacact
ggcctgcaggaatacaaaagcttacaagcagaacttgacgaggtcaatagagaactctct
cgtctagataaagaattggatgactatagagaagaaagtgaagagtacatggctgccgct
gatgaatacaatagactgaagcaagttaagggatctgcagattacaaaagaaagagaaat
tactgcaaacagttgaagagtaaattgtcacacatcaagaagatggttggagactatgat
agacggaaaacttag
DBGET
integrated database retrieval system
