Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957502
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Entry
101957502 CDS
T10664
Symbol
Pcdh17
Name
(RefSeq) protocadherin-17 isoform X3
KO
K16499
protocadherin delta 2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101957502 (Pcdh17)
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Protocadherins
101957502 (Pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Cadherin_4
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
101957502
NCBI-ProteinID:
XP_005340868
UniProt:
I3NFN1
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGSGGRG
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGGSVPFKLEENYD
NFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVL
QVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRS
FNYEQTKAFEFKVLAKDSGAPSHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPR
NAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVV
ELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIIL
LAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNA
MNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQ
GTNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQAD
SDQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQFP
AANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYL
KAKRALSPLLQEVPSASSSPTKACIEPCTSTKGSLDGCEAKPGALAEASSQYLPTDSQYL
SPSKQPRDPPFMASDQMARVFADVHSRASRDSSEMGAVLEQLDHPNRDLGRESVDAEEVV
REIDKLLQDCRGNDPVAVRK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgcttccttctatgggcccctgccctgactctcaaaaac
ctcaactactcagtgcctgaggaacagggggccggcacggtgatcggcaacatcggcaaa
gatgctagactgcagccagggcttccgcccgctgaacgcggtggcagcggcgggcgaggc
aagtcgggcagttaccgggtgctggagaactcggcaccgcacctgctagacgtggacgct
gatagtgggctgctttacaccaaacagcgaatcgaccgtgagtccttgtgtcgccacaat
gccaagtgtcagctgtccctcgaggtgttcgccaacgacaaggaaatctgtatgattaag
gtagagatccaggacatcaacgacaacgctccttctttcccctcagatcagatcgaaatg
gacatctccgaaaacgcggccccgggaacccgctttccccttaccagcgcacatgaccca
gacgcgggcgagaacgggctccgcacctatctgctcacgcgcgatgaccacggtctcttt
gcactggacgtcaagtcccgcggcgacggcaccaagttcccagagctagtcatacagaag
gcgttggaccgtgaacaacagaaccaccatacacttgttctgactgccctggatggaggc
gagcctccccgatctgctacggtgcagatcaacgtgaaggtgatagactctaacgacaac
agcccggtcttcgaggcgccctcctacttggtagaactgcccgagaacgccccgctgggc
accgtagtcatcgatctgaacgccactgacgctgatgagggtcccaatggtgaagtgctc
tactccttcagcagctacgtgcccgaccgcgtgcgggagctcttctccatagacccgaag
accggccttattcgtgttaagggcaacctggattatgaagagaatgggatgctggagata
gacgtacaggccagagacttgggacctaacccaatcccggcccactgcaaggtcacggtc
aagctcatcgaccgcaatgacaacgcgccgtccattggtttcgtctcggtgcgccagggg
gcgctgagcgaggccgccccgcccggcacagtcatcgccctggtgcgggtcactgaccga
gactcgggcaaaaacgggcagctgcaatgtcgagtcctaggtggaggagggacaggcggt
ggtggcggcctaggcggtcccgggggttctgttcccttcaagcttgaggagaactatgat
aacttctacactgtggtgactgaccgcccgctagaccgagagacacaggatgagtacaat
gtgacaatcgtggcgagggacggaggctcacctccactcaactccaccaaatcgttcgcg
gtcaagattctggatgagaatgacaaccctcctcgtttcaccaaagggctctacgtgctg
caagtgcatgagaacaacattccaggagagtacctgggttccgtgctcgcccaggatccc
gacctgggccaaaacggcacagtgtcctattccattctgccctcgcacattggcgacgtg
tcgatctacacctatgtgtctgtgaaccccaccaacggggccatatatgccctgcggtcc
tttaattacgagcagaccaaggcttttgagttcaaggtgcttgctaaggactctggagca
ccctcgcacttggagagtaatgccacggtgagagtgacagtgttagacgtgaatgacaac
gcgccagtgatcgtgctgcccacgctgcagaacgacaccgctgagcttcaggtcccgcgc
aacgctggcctgggctacctggtaagcaccgtgcgcgccttagacagcgactttggcgag
agcgggcgcctcacgtacgagattgtggatggcaatgatgaccacctgtttgagattgat
ccatccagcggcgagattcgcacgctgcaccctttctgggaggacgtgacacctgtggtg
gaactggtggtgaaggtgacagaccatggcaagcccaccttgtccgctgtggccaagctc
attatccggtcggtgagcggctccctgccagaaggggtaccccgggtgaatggcgaacaa
caccactgggacatgtctctgccgcttattgtgactctgagcactatctccatcatcctc
ctagcggccatgatcaccatagctgtcaagtgcaagcgcgagaacaaggagatccgcact
tacaactgccgcatcgccgaatacagccaccctcagctgggcgggggcaagggcaagaag
aagaagatcaacaaaaatgatatcatgctggtgcagagcgaggtggaagagaggaacgcc
atgaacgtcatgaacgtggtgagcagtccctccctggccacttcccccatgtacttcgac
taccaaacccgcctgcccctcagctcgccccggtcagaggtgatgtatctcaaaccagcc
tccaacaacctaactgtccctcaggggcacgcaggctgccacaccagcttcacaggacaa
gggactaacgcgagcgagacccctgccactcggatgtccataattcagacagacaatttt
cccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgttt
aaggacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggctgac
agtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaag
atgaaaactacttcaactaaaagccaaccacttgaacaagaaccagaagagtgtgttaat
tgcacagatgaatgccgagtgcttggtcattctgacaggtgttggatgccacagttccct
gcagccaatcaggctgaaaacgcagattaccgcacaaatctctttgtacccacagttgaa
gctaatgttgagactgagacttacgaaactgtgaatcccactgggaaaaagactttttgt
acatttggaaaagacaagcgagagcacacaattctcattgccaatgttaaaccttattta
aaagccaaacgtgccctgagccctctcctccaggaggtcccctcagcatctagcagccct
accaaggcatgcatcgagccttgcacctcaacaaaaggctccctcgatggttgtgaagca
aaaccaggagccctggccgaagcaagcagtcagtacttgcccactgacagtcagtatctg
tcgcccagtaagcaaccaagagaccctcccttcatggcttccgatcagatggcaagggtc
ttcgctgatgtgcattccagagccagccgggattccagcgagatgggtgctgttcttgag
cagcttgatcaccccaacagggatctgggccgagagtctgtggatgcagaggaagttgtg
agagaaattgataagcttttgcaggactgccgggggaatgaccctgtggctgtgagaaag
tga
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