Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957784
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Entry
101957784 CDS
T10664
Symbol
Arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
iti04530
Tight junction
iti04666
Fc gamma R-mediated phagocytosis
iti04810
Regulation of actin cytoskeleton
iti05100
Bacterial invasion of epithelial cells
iti05132
Salmonella infection
iti05135
Yersinia infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101957784 (Arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
101957784 (Arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
101957784 (Arpc1a)
09150 Organismal Systems
09151 Immune system
04666 Fc gamma R-mediated phagocytosis
101957784 (Arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101957784 (Arpc1a)
05135 Yersinia infection
101957784 (Arpc1a)
05100 Bacterial invasion of epithelial cells
101957784 (Arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101957784 (Arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101957784 (Arpc1a)
Membrane trafficking [BR:
iti04131
]
Others
Actin-binding proteins
Arp2/3 complex
101957784 (Arpc1a)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
101957784 (Arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
EIF3I
Rax2
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
101957784
NCBI-ProteinID:
XP_005339787
UniProt:
A0A287D736
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
ASTPWGSKMPFGQLMSEFGGSGTGGWVHGVSFSASGSRLAWVSHDSTVSVADASKSVQVS
TLKTEFLPLLSVSFVSENSVVAAGHDCCPMLFNYDDRGCLTFVSKLDIPKQSIQRNMSAM
ERFRNMDKRATTEDRNTALETLHQNSITQVSIYEVDKQDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcatcagtttttactagagccaatcacctgtcatgcttggaacagggatcgt
acccagattgcccttagccccaataatcatgaagtgcacatctataagaagaatgggagc
cagtgggtgaaagctcatgaactcaaggagcacaacggacacatcacaggtattgactgg
gctcccaagagtgaccgcatcgtcacttgtggggcagaccgcaatgcctacgtctggagt
cagaaagatggtgtctggaagcccaccttggtgatcctgaggatcaatcgtgcagccact
tttgtgaaatggtcccctctagagaacaaatttgctgtgggaagtggagcacggctcatt
tccgtttgctacttcgaatctgaaaatgactggtgggtaagcaagcacattaaaaagccg
atccgttccacggtcctcagcttggattggcatcccaacaatgttttgctggcagcagga
tcgtgtgacttcaaatgcagagtattttctgcctacattaaagaagtagatgagaagcca
gccagcacgccctggggcagcaagatgccttttggtcagttgatgtcagaatttggtggc
agtggcactggtggctgggtccatggggtcagcttctctgccagtgggagccgcttggcc
tgggtcagccatgacagcaccgtgtctgttgctgatgcctcaaaaagtgtccaggtctca
actctgaaaacagagttcctgccactcctgagtgtatcatttgtctcggagaatagcgtt
gtggcagctggccatgactgctgcccgatgctctttaactacgatgaccgcggctgcttg
acctttgtctccaagctagacattccaaaacagagcatccagcgcaacatgtctgccatg
gaacgcttccgcaacatggacaagagggccaccaccgaggaccgcaatacagccttggaa
acgctgcaccagaatagcatcactcaagtgtctatatatgaggtggacaagcaagattgt
cgcaaattttgcactactggcatcgatggagccatgaccatttgggatttcaagacctta
gagtcttcaatccaaggcctccggataatgtga
DBGET
integrated database retrieval system
