Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101957803
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Entry
101957803 CDS
T10664
Symbol
Ttc6
Name
(RefSeq) tetratricopeptide repeat protein 6
KO
K24929
tetratricopeptide repeat protein 6
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101957803 (Ttc6)
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
101957803 (Ttc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_17
TPR_9
TPR_12
TPR_16
TPR_14
ARM_TT21_N
TPR_19
TPR_6
ANAPC3
TPR_10
TPR_Slam
SRP_TPR_like
ARM_TT21_C
RIP_P131-like
Motif
Other DBs
NCBI-GeneID:
101957803
NCBI-ProteinID:
XP_040131297
LinkDB
All DBs
Position
Unknown
AA seq
1835 aa
AA seq
DB search
MSTFKKHFGLKSREESLLFKELEKVRQEAKKDFLKFKQKLASNLTSNEGLDHHPRPARPG
EKRSEGSFTPRRTLSKGSPPAKVPATAAGVFLQEALQGLARPSSPSEAFAVRKTRPFRPQ
EFYLRSSAFLRYRIQKIPPIITPEVGTSKPVVLRPLPTSLGKSGARLSPGSPRAAAARQV
VDAAEEQEANQEITPFSEAQGAKDRKTSSISSEDSDWEAGWWRRRVKIRAHFMSQGSVPR
GSEADESISKAVWESGLLRDVHEVAQPELLPTRVIPRTIEEVITSLQSEAQLASDQIIRE
LIQSILGQNYDIKIEDISIMGKLGPKTTELEAEAPRTEEETPQMEAESSQMETEQELHIG
VEEPQVPMFEEPLQDVSSIFQIEQEAIPEWEGSETGSMLFGAQDMSRIQKAEPSSKPLQG
RQPPGKSKVRKQLKSGQLLQIRGKEVKRKPKSKPRIPAWRLTKSLKYRRDKNLPKKILQA
PSIPHMHDLCTTIPGRQLPIDLHLASRVYHTVSKKGHRTLVEFFGSCFLDDHFLDTEKDK
ILCGIPVKRENEDYACVPLVPPETPSELAQGTMQYVHNLQLSGEETSAYPEITKMFWNPT
APKFSVPECVMRDIVYPKYESVQRSRILTEKILSESKERISLSGYRRMSFKVFLLKKSAS
FENIKTCFSTQSTQLKRAKSAVELRKEFTTKSLELKDDIQSNLGLLMYQKRRALELQFAE
QKKAQAPFIRAHITELLESIPDNDTFEDISLSLIEASKKAGITYIVFPKRKMMKWKKSMK
SNKLTTMYKELSKPPKPIQRSLSHGILPGERKCFLKVPLYERQVRCPSLPLKLDFDKFVE
SRGGIPRNTNPRMWAAEIFIKDKIPKVPPPVVKTSVVKEISEKVEEPPKLELSDFLGCDL
PPEVIEHYKSEVKTLTQQINNKILPEVAYCRRGAIYRHLGKLQSAMNDLQEAIILEPMLL
NAYWHRHFIYLFQDRINDALDDLNYISKYNKNNAEAYLSKAEIFKNKENTASAILNYTLA
IKCRPTEADSYFRRGEMHEKANRVLAIDDYSKCIFYDPQRVDALLKRGMFFYENENWTSA
IQDFTALLNIEPQNLQARIHRARAYFKRSFYKQAIQDFSIAIHLDPNNWLSFYYRACLFR
KTNPRKALQDYSISVLLNDGYENFSCFLHRGIVYVNLKLWWLAICDFEAVISLERTVTLA
YINIGLIYLLHLENYNEAICWFSEAIKIDPSCIQSYICRAEAYYKLHKLKRAVKELSRAI
HFQPDGVQLYIIRGQYLLMMKCYDLAKFTIYQVAEMNRGLIELNPIQQAIIYSFCENHEK
AIQVLEESLWSKPEVIMFIIAKTLMKAKKFKEALRMFKKAMEICSCSLKGQNAAAFSSEC
LYNLGLCYIEENNFQMAFDSFTKAVKANPDFAEAFYQRGFCKVKLHKESSVLDFNRAITI
NPKHYQAYLGRVAYYGLKGRFSKAILNCNEAISIYPESVRAYVCRGALKYYSGNYRLAIE
DLTTAINMDRKCYVAFYNRALCYIKTNELQMALADYGIVLLLEAVESIILNTLINRGIVY
AEQEQYGFALEDFKQAALISQTNASLCHATAMCHHRYGDQLVSKGRQAQGKFQKAWNHFT
ISIEIDPKSYLAYEGRAVVCLQMGNNFAAMQDINAAIKINTTAEFITNRGVIHEFMGQKQ
NAVKDYQAAIALDPKYSLAYFNAGNIYFHHRQFSQANDYFSKALTFDPEDDHALMNRAIT
NTILNKYEEAEEDFACAVERCPFWAAVYFNRAHLYCCLEKYELAEEELSKALSLKPNDAL
AYHLRAKVRGKIGLIEQAMADYNQALDLEDCALHT
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccttcaaaaagcactttggactgaaatccagagaagaatccctcctgtttaaa
gagctggagaaggttcgccaggaggctaaaaaggactttctcaaattcaagcagaagttg
gcgtctaacctgacttcaaatgaaggactagaccaccacccccgtccggcccgccctggg
gagaagaggagcgaaggttccttcacgcctcgcagaaccctttccaaagggtcccctccc
gccaaagtccctgcgaccgctgctggggtcttcctgcaggaggcgctccaagggctagcg
cgcccctcgagcccgagcgaggctttcgctgtgcgaaagaccagaccatttcgtccccag
gagttttacttgcggagctccgcgttcctgcggtacaggatccagaagataccgccgatc
atcactccggaggtgggcacatctaaacctgtggtcctgcggccgctgcccacgtccctg
ggcaagtcaggagcgcgcctgagtcccgggagcccgcgggccgcagcggccaggcaggtc
gtcgacgcggcagaggagcaagaagcaaaccaggagataactccgttctcagaggcccag
ggggccaaagacaggaagaccagctccatttccagcgaggacagcgactgggaggcggga
tggtggcggaggagagtaaagattcgcgctcacttcatgagccagggctcagtccccagg
gggtcggaggcagacgagtccatttccaaagcagtgtgggagagtggcctgcttagggat
gtgcacgaggtcgcccagcctgagctgctgcccaccagagtgatccccagaaccatcgag
gaggtcatcacctcgctgcagtcggaggcccagctggcctctgaccagatcatcagagag
ctcatacagagcatcctgggccagaactacgacataaaaatagaagatatttctataatg
ggaaaactgggccccaaaaccactgagctggaagcagaagcacctcggacggaagaagaa
acacctcagatggaggcagaatcatctcagatggagacagaacaagagttacacatcggt
gttgaggaacctcaagtgccaatgtttgaggagcccttgcaagatgtgtcaagtattttc
cagattgaacaggaagctataccagaatgggaaggctcagaaacgggaagcatgttattt
ggagcacaggatatgtcacgaatacagaaagcagagccatcaagtaaacctctgcaaggt
agacagcctccaggaaaatcaaaagtccgcaagcagttgaaatcaggacaactcttgcaa
atcagaggaaaagaagttaagagaaaaccaaaaagtaaaccaagaattccagcatggaga
ttaacaaagtctttaaaataccgtcgtgataaaaacctacctaaaaaaattctacaagcc
ccttccattcctcacatgcatgatctgtgcaccaccatcccaggccgacagctgcccatt
gacttgcacctggcctcccgcgtgtaccacactgtcagcaagaagggccaccgtacccta
gttgaattttttggatcatgtttcttagatgatcactttctagacacagaaaaagataaa
atactgtgtggaattcctgttaagagagaaaacgaagactatgcctgtgtccctctggtg
ccaccagagacaccttctgaattggcacaaggaactatgcaatatgttcacaacctgcaa
ctctcaggagaggagacatctgcttatccagaaattacaaagatgttttggaatcccact
gcacccaaattctctgttccagaatgtgtcatgagggacattgtgtatccaaaatatgag
agtgttcaaagaagcagaattttaactgagaaaattttgtctgaaagcaaggaaagaatc
agtctaagtggttacagaagaatgagctttaaggttttcttactaaaaaaatctgcatca
tttgaaaatattaaaacatgtttcagtacacagtctacacaattgaagagagcaaaatct
gcagttgaattgagaaaggagttcaccaccaaatcattagaactaaaggatgatattcaa
agcaacctgggactgttgatgtaccagaaaagaagggcgttggagctccagtttgctgag
caaaagaaggcccaggcccctttcatcagagcacatattactgagctcctagagagcatt
ccggataacgacacttttgaagacatctctctgtctctcatcgaagcatcgaaaaaagct
ggcattacttacattgtttttcccaagagaaagatgatgaaatggaagaaaagtatgaaa
tcgaataaacttactactatgtataaagagttatccaagcctccaaaaccaattcaaaga
tcattatctcatggaatacttcctggagaaaggaaatgttttctcaaagttccattatat
gaacgtcaagtacggtgtcccagcttacctttgaagttagattttgataaatttgtggaa
agtaggggaggaataccaaggaatactaatcctcggatgtgggctgctgaaatattcatt
aaagataagattccgaaagtacccccaccagtagtgaaaacttctgttgtaaaggagatt
tctgaaaaagttgaagaaccaccaaaactagaattaagtgattttttggggtgtgatctt
ccaccagaagtcattgagcattataaatctgaagtgaaaaccttgactcaacaaataaat
aataagatacttcctgaagttgcatattgcaggcgtggagctatttataggcacctggga
aagttacagagtgccatgaatgatttacaggaagctataattttggagccaatgcttctc
aatgcctactggcaccgacatttcatttatcttttccaagacagaattaatgatgctttg
gatgacttgaattatataagtaaatataataaaaataatgcagaggcatatttgtcaaag
gcagaaattttcaagaacaaagaaaacactgcttcggcaattctaaattataccctggca
attaagtgcaggcccacagaagctgatagctatttcaggaggggtgagatgcatgaaaaa
gcaaacagagtactggctattgatgactattctaaatgtattttttatgatccccaaaga
gtagatgcattattgaaacgtgggatgtttttctatgaaaatgaaaattggacttcagcc
atacaggattttacagctttgttaaatatagaaccccaaaatttgcaagcaaggatacat
cgagcaagagcatattttaaaaggagtttttataaacaagcaattcaggacttttctatt
gctattcacttagatcctaataactggttgtcattctattatcgagcttgcttatttaga
aagactaaccctcgtaaagcactacaggattatagcatttcagttctcctaaatgacggc
tatgagaattttagttgttttctacatcggggcatagtctatgtaaatctaaaactttgg
tggctggcaatttgtgactttgaagctgttatttctctagaaagaactgttactttggct
tacataaacattggcctcatatatctgctacacctggaaaactacaatgaagctatttgt
tggttttctgaggctattaaaattgatccttcgtgtattcaaagctatatttgtagagca
gaagcctattataagctgcataaattgaaaagggcagtcaaggagttatctcgtgccatt
cactttcagccagatggagtccaattgtatataataagaggacaatatcttcttatgatg
aagtgttatgatctggcaaagttcactatttatcaagtagcagaaatgaaccgtggtctc
attgagttgaacccaatacaacaagcaatcatttattcattttgtgaaaaccatgagaag
gctattcaggtcttggaggagagcttgtggagtaagccagaagtaatcatgtttatcata
gcaaaaacactaatgaaggccaagaaattcaaggaagctctgagaatgtttaagaaggca
atggaaatctgttcttgttctctcaaaggacaaaatgctgcagctttttcatcagagtgc
ctgtataacttgggtctttgttacatagaagaaaacaacttccaaatggcttttgattct
tttacaaaagctgtgaaagcaaatcctgattttgcagaagctttttatcaacgagggttt
tgtaaagtaaaactccacaaggaaagctcagttctggacttcaatcgtgcaattacgatc
aatccgaaacactaccaggcatacttaggccgagtagcctactatggtttaaaaggcaga
ttctccaaagcaattttgaactgtaatgaggcaatcagtatttatcctgagagtgtgcgt
gcctatgtctgcagaggagctctgaaatactacagtgggaattacaggctagctattgaa
gatttaactacagctatcaacatggacagaaagtgttatgtagcattttataacagagca
ttatgttatatcaagacaaatgaacttcaaatggccttagcagattatggaattgtgctg
ctgcttgaagctgtagaaagtataatcttaaatactctcattaatcgtggaatcgtctat
gctgaacaagagcagtatggatttgccttagaggattttaaacaagctgcactgataagc
cagaccaacgcgagtctttgtcatgctaccgccatgtgccaccacaggtatggagatcaa
ctggtgtccaaggggaggcaagcccaaggaaaattccagaaagcttggaaccattttact
atttctatagaaattgatccaaagagctacctggcctatgaaggaagagctgtggtttgt
cttcagatgggtaataattttgctgccatgcaggatattaatgctgccataaagatcaat
accacagcagagttcataacaaatcgtggtgtgattcatgagtttatgggccaaaaacag
aatgcagtaaaagactaccaagcagcaattgctttagaccccaagtactcactggcttac
tttaatgccggaaatatctactttcaccacaggcagttttctcaggccaatgactacttc
tcaaaggctttaacgtttgatccagaagatgatcatgctctcatgaatcgagctatcaca
aatacaatattaaataaatatgaagaagcagaagaagattttgcttgtgcagttgaacgt
tgtccattttgggctgcagtatatttcaacagagcacatttatactgctgtttggagaag
tatgagctagctgaggaagaactgagtaaagctctgtctttgaagcctaatgatgctcta
gcatatcacctcagagcaaaagttcgtggtaaaataggtctgattgagcaagctatggct
gactacaaccaagcacttgatcttgaagactgtgccttacatacatga
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integrated database retrieval system
