Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101958054
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Entry
101958054 CDS
T10664
Symbol
Pcca
Name
(RefSeq) propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1
KO
K01965
propionyl-CoA carboxylase alpha subunit [EC:
6.4.1.3
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00280
Valine, leucine and isoleucine degradation
iti00630
Glyoxylate and dicarboxylate metabolism
iti00640
Propanoate metabolism
iti01100
Metabolic pathways
iti01200
Carbon metabolism
Module
iti_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
101958054 (Pcca)
00640 Propanoate metabolism
101958054 (Pcca)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
101958054 (Pcca)
Enzymes [BR:
iti01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
101958054 (Pcca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_C
PCC_BT
Biotin_carb_N
Biotin_lipoyl
Biotin_lipoyl_2
Dala_Dala_lig_C
ATP-grasp
RimK
ATP-grasp_5
HlyD_3
ATP-grasp_3
PASTA
ATPgrasp_ST
GARS_A
HlyD_D23
SLT_beta
BT_MCC_alpha
SnoaL_3
Motif
Other DBs
NCBI-GeneID:
101958054
NCBI-ProteinID:
XP_013216166
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MGIKTVAIHSDVDASSVHVKMADEAVCVGPAPTSKSYLNMDAIMEAIKKTRAQAVHPGYG
FLSENKEFAKCLAAEDVIFIGPDTHAIQAMGDKIESKLLAKKAKVNTIPGFDGVVKDADE
AVRIAREIGYPVMIKASAGGGGKGMRVAWNDEETREGFRFSSQEAASSFGDDRLLIEKFI
DNPRHIEIQVLGDKHGNALWLNERECSVQRRNQKVVEEAPSIFLDPETRRAMGEQAVALA
RAVKYSSAGTVEFLVDSRKNFYFLEMNTRLQVEHPVTECITGLDLVQEMIRVAKGYPLRH
KQTDIPINGWAVECRVYAEDPYKSFGLPSIGRLSQYQEPIHLPGVRVDSGIQPGSDISIY
YDPMISKLITYGSDRTEALKRMEDALDNYVIRGVTHNIALLREVIINSRFVKGDISTKFL
SDVYPDGFKGHVLTENETHQLLAIASSLFVASQLRAQHFQDHSRMPVIKPDVAKWELSVK
LHNEDHTVTASSSGSAFSVEVDGLKLNVTSTWNLASPLLSVSVDGTQRTVQCLSREAGGN
MSIQFLGTVYKVRVLTKLAAELNKFMLEKVTEDTSSILRSPMPGVVVAVSVKPGDMVSEG
QEICVIEAMKMQNSMAAGKTGKVKLVHCKAGDTVGEGDLLVELE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgggcattaagacggttgccatccacagtgatgttgatgctagttctgttcacgtgaaa
atggcggatgaggccgtctgtgttggcccagctcccaccagtaaaagctacctcaacatg
gatgccatcatggaagccattaagaaaaccagggcccaagctgtacatccaggttatgga
ttcctttcagaaaacaaagaatttgccaagtgtttggcagcagaagatgttattttcatt
ggacctgacacacatgctattcaagccatgggtgacaagattgaaagcaaattattagcc
aagaaagcaaaggttaacacaatccctggctttgatggggtagtaaaggatgcagatgaa
gctgtcagaattgcaagggaaattggctacccggtcatgatcaaggcctcagcaggcggt
ggcgggaaaggcatgcgcgtcgcttggaatgatgaggagaccagggaggggtttagattt
tcatctcaagaagctgcttctagctttggtgatgatcgactactaatagaaaaatttatt
gataaccctcgtcatatagaaatccaggttttaggtgataaacatggaaatgctttgtgg
cttaatgaaagagagtgctcagttcagagaagaaaccagaaggtggtggaggaagcacca
agcatttttctggatccggagactcgaagagccatgggagaacaagctgtagctcttgcc
agagcagtgaagtactcctcagctggaaccgtggagttcctggtggactccaggaagaac
ttctacttcctagaaatgaatacgagactgcaggttgagcatcctgtcacagaatgcatc
actggcctggaccttgtccaagaaatgatccgtgttgctaagggttacccgctcaggcac
aaacaaactgatattcccatcaatggctgggccgtggaatgccgggtttacgctgaggac
ccctacaagtcttttggtttaccgtctattgggagattgtctcagtaccaagagccgata
catctacctggtgtccgggttgacagtggcatccaaccaggaagtgatatcagcatttat
tatgatcctatgatttcaaaattaatcacctatggctctgatagaacggaagccctgaag
aggatggaggacgcactggataattatgttattcgaggtgttacacataatatcgcatta
cttcgagaggtgataatcaattcacgctttgtaaaaggagacatcagtactaaatttctg
tcggatgtatatcctgatggctttaaaggacatgtgttaacagagaatgagacacaccag
ctactggcaattgcatcatcgttgtttgtggcatcccaattacgagcccaacattttcaa
gaccattcaagaatgcctgttattaagccagacgtggctaagtgggagctctccgtaaaa
ttacacaatgaagatcacactgtcacagcatcaagcagtggctcagcattttctgtggaa
gttgatgggttgaaactaaatgtgaccagtacgtggaacttggcttcgcccttattgtct
gtcagcgttgatggcacgcagaggactgtgcagtgtctttctcgagaagctggtggaaac
atgagcattcagtttcttggcacagtgtacaaggtacgtgttttaaccaaactcgccgca
gaattgaacaagtttatgctggaaaaagtgactgaggacacaagcagtatcctgcgttcc
ccgatgcctggagtggtggtggctgtctccgtcaagccaggggacatggtatcagaaggg
caggaaatttgtgtgattgaagccatgaaaatgcagaacagtatggcggccgggaagact
ggcaaggtgaagctggtgcactgtaaagctggagacacagtcggagaaggggatctgctc
gtggagctggaatga
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